RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 ZNF525Q8N782 197 aa12.64□□□□□ -0.39
RRP1B-201ENST00000340648 RNF24Q9Y225 148 aa12.64□□□□□ -0.39
RRP1B-201ENST00000340648 SCN5AQ14524 2016 aa12.64□□□□□ -0.39
RRP1B-201ENST00000340648 J3QR89 54 aa12.64□□□□□ -0.39
RRP1B-201ENST00000340648 APELAP0DMC3 54 aa12.64□□□□□ -0.39
RRP1B-201ENST00000340648 HIST1H1EP10412 219 aaKnown RBP12.64□□□□□ -0.39
RRP1B-201ENST00000340648 VKORC1L1Q8N0U8 176 aa12.64□□□□□ -0.39
RRP1B-201ENST00000340648 ATOH7Q8N100 152 aa12.64□□□□□ -0.39
RRP1B-201ENST00000340648 TMEM251Q8N6I4 163 aa12.64□□□□□ -0.39
RRP1B-201ENST00000340648 ISLRO14498 428 aa12.64□□□□□ -0.39
RRP1B-201ENST00000340648 NDUFA2O43678 99 aa12.64□□□□□ -0.39
RRP1B-201ENST00000340648 SRIP30626 198 aa12.64□□□□□ -0.39
RRP1B-201ENST00000340648 UCP2P55851 309 aa12.64□□□□□ -0.39
RRP1B-201ENST00000340648 TNXAQ16473 311 aa12.64□□□□□ -0.39
RRP1B-201ENST00000340648 ABHD12Q8N2K0 398 aa12.64□□□□□ -0.39
RRP1B-201ENST00000340648 MAFAQ8NHW3 353 aaPredicted RBP12.64□□□□□ -0.39
RRP1B-201ENST00000340648 IMMP2LQ96T52 175 aa12.64□□□□□ -0.39
RRP1B-201ENST00000340648 GLRX2Q9NS18 164 aa12.64□□□□□ -0.39
RRP1B-201ENST00000340648 DCAF10Q5QP82 559 aa12.64□□□□□ -0.39
RRP1B-201ENST00000340648 NPCDR1Q9BY65 106 aa12.64□□□□□ -0.39
RRP1B-201ENST00000340648 UQCR10Q9UDW1 63 aa12.64□□□□□ -0.39
RRP1B-201ENST00000340648 NLRC5Q86WI3 1866 aa12.64□□□□□ -0.39
RRP1B-201ENST00000340648 SVILO95425 2214 aa12.64□□□□□ -0.39
RRP1B-201ENST00000340648 OR2V2Q96R30 315 aa12.63□□□□□ -0.39
RRP1B-201ENST00000340648 HES7Q9BYE0 225 aa12.63□□□□□ -0.39
RRP1B-201ENST00000340648 RFPL3SP0C7P2 107 aa12.63□□□□□ -0.39
RRP1B-201ENST00000340648 CRYBB3P26998 211 aa12.63□□□□□ -0.39
RRP1B-201ENST00000340648 HERPUD1Q15011 391 aa12.63□□□□□ -0.39
RRP1B-201ENST00000340648 INO80CQ6PI98 192 aaPredicted RBP12.63□□□□□ -0.39
RRP1B-201ENST00000340648 MMD2Q8IY49 270 aa12.63□□□□□ -0.39
RRP1B-201ENST00000340648 OR4D5Q8NGN0 318 aa12.63□□□□□ -0.39
RRP1B-201ENST00000340648 VENTXO95231 258 aa12.63□□□□□ -0.39
RRP1B-201ENST00000340648 RPL23P62829 140 aaKnown RBP12.63□□□□□ -0.39
RRP1B-201ENST00000340648 ZNF738Q8NE65 137 aa12.63□□□□□ -0.39
RRP1B-201ENST00000340648 RHBDL1O75783 438 aa12.63□□□□□ -0.39
RRP1B-201ENST00000340648 OR2J3O76001 311 aa12.63□□□□□ -0.39
RRP1B-201ENST00000340648 FGF5P12034 268 aa12.63□□□□□ -0.39
RRP1B-201ENST00000340648 CD82P27701 267 aa12.63□□□□□ -0.39
RRP1B-201ENST00000340648 REG1BP48304 166 aa12.63□□□□□ -0.39
RRP1B-201ENST00000340648 CTAG1AP78358 180 aa12.63□□□□□ -0.39
RRP1B-201ENST00000340648 CDCP2Q5VXM1 449 aa12.63□□□□□ -0.39
RRP1B-201ENST00000340648 OR5P3Q8WZ94 311 aa12.63□□□□□ -0.39
RRP1B-201ENST00000340648 C9JQL5 133 aa12.62□□□□□ -0.39
RRP1B-201ENST00000340648 NDUFS6O75380 124 aaKnown RBP12.62□□□□□ -0.39
RRP1B-201ENST00000340648 VSTM2AQ8TAG5 236 aa12.62□□□□□ -0.39
RRP1B-201ENST00000340648 PAXXQ9BUH6 204 aa12.62□□□□□ -0.39
RRP1B-201ENST00000340648 DNAJC13O75165 2243 aa12.62□□□□□ -0.39
RRP1B-201ENST00000340648 ODAMA1E959 279 aa12.62□□□□□ -0.39
RRP1B-201ENST00000340648 MST1LQ2TV78 715 aa12.62□□□□□ -0.39
RRP1B-201ENST00000340648 BHLHA15Q7RTS1 189 aaPredicted RBP12.62□□□□□ -0.39
RRP1B-201ENST00000340648 HIST3H2BBQ8N257 126 aa12.62□□□□□ -0.39
RRP1B-201ENST00000340648 IGHV3-21A0A0B4J1V1 117 aa12.62□□□□□ -0.39
RRP1B-201ENST00000340648 QRFPP83859 136 aa12.62□□□□□ -0.39
RRP1B-201ENST00000340648 NFAM1Q8NET5 270 aaPredicted RBP12.62□□□□□ -0.39
RRP1B-201ENST00000340648 HIST1H2BLQ99880 126 aa12.62□□□□□ -0.39
RRP1B-201ENST00000340648 TMEM140Q9NV12 185 aa12.62□□□□□ -0.39
RRP1B-201ENST00000340648 C5orf63A6NC05 138 aa12.62□□□□□ -0.39
RRP1B-201ENST00000340648 SLC17A3O00476 420 aa12.62□□□□□ -0.39
RRP1B-201ENST00000340648 PLAUP00749 431 aa12.62□□□□□ -0.39
RRP1B-201ENST00000340648 HLA-DQA1P01909 254 aa12.62□□□□□ -0.39
RRP1B-201ENST00000340648 FAM87AP0C7U9 286 aa12.62□□□□□ -0.39
RRP1B-201ENST00000340648 ATP5G3P48201 142 aa12.62□□□□□ -0.39
RRP1B-201ENST00000340648 C19orf35Q6ZS72 473 aa12.62□□□□□ -0.39
RRP1B-201ENST00000340648 K7ESF4 209 aa12.61□□□□□ -0.39
RRP1B-201ENST00000340648 EFNA2O43921 213 aa12.61□□□□□ -0.39
RRP1B-201ENST00000340648 CLPSP04118 112 aa12.61□□□□□ -0.39
RRP1B-201ENST00000340648 SSTR5P35346 364 aa12.61□□□□□ -0.39
RRP1B-201ENST00000340648 TCTAP57738 103 aa12.61□□□□□ -0.39
RRP1B-201ENST00000340648 PYY3Q5JQD4 70 aa12.61□□□□□ -0.39
RRP1B-201ENST00000340648 VWA1Q6PCB0 445 aa12.61□□□□□ -0.39
RRP1B-201ENST00000340648 SSX8Q7RTT4 187 aa12.61□□□□□ -0.39
RRP1B-201ENST00000340648 SLC25A53Q5H9E4 307 aa12.61□□□□□ -0.39
RRP1B-201ENST00000340648 ZNF441Q8N8Z8 693 aa12.61□□□□□ -0.39
RRP1B-201ENST00000340648 SEBOXQ9HB31 216 aaPredicted RBP12.61□□□□□ -0.39
RRP1B-201ENST00000340648 COX7A1P24310 79 aa12.61□□□□□ -0.39
RRP1B-201ENST00000340648 PPOXP50336 477 aa12.61□□□□□ -0.39
RRP1B-201ENST00000340648 ERVFRD-1P60508 538 aa12.61□□□□□ -0.39
RRP1B-201ENST00000340648 LCN2P80188 198 aa12.61□□□□□ -0.39
RRP1B-201ENST00000340648 TGIF2LYQ8IUE0 185 aa12.61□□□□□ -0.39
RRP1B-201ENST00000340648 WDYHV1Q96HA8 205 aa12.61□□□□□ -0.39
RRP1B-201ENST00000340648 NDUFAF3Q9BU61 184 aa12.61□□□□□ -0.39
RRP1B-201ENST00000340648 VSIRQ9H7M9 311 aa12.61□□□□□ -0.39
RRP1B-201ENST00000340648 RPEQ96AT9 228 aa12.61□□□□□ -0.39
RRP1B-201ENST00000340648 RNF7Q9UBF6 113 aa12.61□□□□□ -0.39
RRP1B-201ENST00000340648 MPDZO75970 2070 aa12.6□□□□□ -0.39
RRP1B-201ENST00000340648 OR1L8Q8NGR8 309 aa12.6□□□□□ -0.39
RRP1B-201ENST00000340648 LEAP2Q969E1 77 aa12.6□□□□□ -0.39
RRP1B-201ENST00000340648 MGST3O14880 152 aa12.6□□□□□ -0.39
RRP1B-201ENST00000340648 ID3Q02535 119 aa12.6□□□□□ -0.39
RRP1B-201ENST00000340648 FADS6Q8N9I5 356 aa12.6□□□□□ -0.39
RRP1B-201ENST00000340648 PERPQ96FX8 193 aa12.6□□□□□ -0.39
RRP1B-201ENST00000340648 OTX1P32242 354 aaPredicted RBP12.6□□□□□ -0.39
RRP1B-201ENST00000340648 PCP4P48539 62 aa12.6□□□□□ -0.39
RRP1B-201ENST00000340648 DOLPP1Q86YN1 238 aa12.6□□□□□ -0.39
RRP1B-201ENST00000340648 SPSB4Q96A44 273 aa12.6□□□□□ -0.39
RRP1B-201ENST00000340648 TIMD4Q96H15 378 aa12.6□□□□□ -0.39
RRP1B-201ENST00000340648 IGKV1-12A0A0C4DH73 117 aa12.6□□□□□ -0.39
RRP1B-201ENST00000340648 IFITM10A6NMD0 228 aa12.6□□□□□ -0.39
RRP1B-201ENST00000340648 IGKV1D-12P01611 117 aa12.6□□□□□ -0.39
RRP1B-201ENST00000340648 COX5BP10606 129 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms