RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 CDK10Q15131 360 aa12.02□□□□□ -0.49
VAPA-201ENST00000340541 PLGLAQ15195 96 aa12.02□□□□□ -0.49
VAPA-201ENST00000340541 RTL8BQ17RB0 113 aa12.02□□□□□ -0.49
VAPA-201ENST00000340541 MRGPRG-AS1Q2M3A8 158 aa12.02□□□□□ -0.49
VAPA-201ENST00000340541 FOXB2Q5VYV0 432 aa12.02□□□□□ -0.49
VAPA-201ENST00000340541 ZNF562Q6V9R5 426 aa12.02□□□□□ -0.49
VAPA-201ENST00000340541 OVCH2Q7RTZ1 564 aa12.02□□□□□ -0.49
VAPA-201ENST00000340541 CLVS1Q8IUQ0 354 aaPredicted RBP12.02□□□□□ -0.49
VAPA-201ENST00000340541 GPX8Q8TED1 209 aa12.02□□□□□ -0.49
VAPA-201ENST00000340541 HARBI1Q96MB7 349 aa12.02□□□□□ -0.49
VAPA-201ENST00000340541 CLCC1Q96S66 551 aa12.02□□□□□ -0.49
VAPA-201ENST00000340541 BOLA1Q9Y3E2 137 aa12.02□□□□□ -0.49
VAPA-201ENST00000340541 NUBP2Q9Y5Y2 271 aa12.02□□□□□ -0.49
VAPA-201ENST00000340541 SOX15O60248 233 aa12.01□□□□□ -0.49
VAPA-201ENST00000340541 RRASP10301 218 aa12.01□□□□□ -0.49
VAPA-201ENST00000340541 RPL5P46777 297 aaKnown RBP12.01□□□□□ -0.49
VAPA-201ENST00000340541 BRWD1-AS2P59051 145 aa12.01□□□□□ -0.49
VAPA-201ENST00000340541 PJVKQ0ZLH3 352 aa12.01□□□□□ -0.49
VAPA-201ENST00000340541 KIAA0141Q14154 515 aaPredicted RBP12.01□□□□□ -0.49
VAPA-201ENST00000340541 CXorf66Q5JRM2 361 aaPredicted RBP12.01□□□□□ -0.49
VAPA-201ENST00000340541 C8orf86Q6ZUL3 223 aa12.01□□□□□ -0.49
VAPA-201ENST00000340541 LYSMD2Q8IV50 215 aa12.01□□□□□ -0.49
VAPA-201ENST00000340541 ZNF695Q8IW36 515 aa12.01□□□□□ -0.49
VAPA-201ENST00000340541 GIMAP1Q8WWP7 306 aa12.01□□□□□ -0.49
VAPA-201ENST00000340541 AP3S1Q92572 193 aa12.01□□□□□ -0.49
VAPA-201ENST00000340541 KLK15Q9H2R5 256 aa12.01□□□□□ -0.49
VAPA-201ENST00000340541 IFT46Q9NQC8 304 aa12.01□□□□□ -0.49
VAPA-201ENST00000340541 CCL28Q9NRJ3 127 aa12.01□□□□□ -0.49
VAPA-201ENST00000340541 ARPC1BO15143 372 aaKnown RBP12□□□□□ -0.49
VAPA-201ENST00000340541 SHOXO15266 292 aa12□□□□□ -0.49
VAPA-201ENST00000340541 CRYZL1O95825 349 aa12□□□□□ -0.49
VAPA-201ENST00000340541 SLC6A1P30531 599 aa12□□□□□ -0.49
VAPA-201ENST00000340541 CDX1P47902 265 aaPredicted RBP12□□□□□ -0.49
VAPA-201ENST00000340541 TMBIM6P55061 237 aa12□□□□□ -0.49
VAPA-201ENST00000340541 MSMO1Q15800 293 aa12□□□□□ -0.49
VAPA-201ENST00000340541 MZT2AQ6P582 158 aa12□□□□□ -0.49
VAPA-201ENST00000340541 KCTD9Q7L273 389 aa12□□□□□ -0.49
VAPA-201ENST00000340541 PPP1R27Q86WC6 154 aa12□□□□□ -0.49
VAPA-201ENST00000340541 LINC00482Q8N8I6 264 aa12□□□□□ -0.49
VAPA-201ENST00000340541 KLHL30-AS1Q8NEE0 82 aa12□□□□□ -0.49
VAPA-201ENST00000340541 RAB2BQ8WUD1 216 aa12□□□□□ -0.49
VAPA-201ENST00000340541 RCC1LQ96I51 464 aaKnown RBP12□□□□□ -0.49
VAPA-201ENST00000340541 GPHA2Q96T91 129 aa12□□□□□ -0.49
VAPA-201ENST00000340541 BCL7BQ9BQE9 202 aa12□□□□□ -0.49
VAPA-201ENST00000340541 FAM103A1Q9BTL3 118 aaKnown RBP12□□□□□ -0.49
VAPA-201ENST00000340541 MIXL1Q9H2W2 232 aa12□□□□□ -0.49
VAPA-201ENST00000340541 SCPEP1Q9HB40 452 aa12□□□□□ -0.49
VAPA-201ENST00000340541 ADAM30Q9UKF2 790 aa12□□□□□ -0.49
VAPA-201ENST00000340541 MRPS7Q9Y2R9 242 aaKnown RBP12□□□□□ -0.49
VAPA-201ENST00000340541 SMIM31A0A1B0GVY4 71 aa11.99□□□□□ -0.49
VAPA-201ENST00000340541 FCGR3BO75015 233 aa11.99□□□□□ -0.49
VAPA-201ENST00000340541 RFX2P48378 723 aa11.99□□□□□ -0.49
VAPA-201ENST00000340541 DYRK1AQ13627 763 aa11.99□□□□□ -0.49
VAPA-201ENST00000340541 ECSCRQ19T08 205 aa11.99□□□□□ -0.49
VAPA-201ENST00000340541 DHRS11Q6UWP2 260 aa11.99□□□□□ -0.49
VAPA-201ENST00000340541 SNX29P2Q8IUI4 249 aa11.99□□□□□ -0.49
VAPA-201ENST00000340541 MRPL41Q8IXM3 137 aaKnown RBP11.99□□□□□ -0.49
VAPA-201ENST00000340541 OSR1Q8TAX0 266 aaPredicted RBP11.99□□□□□ -0.49
VAPA-201ENST00000340541 DYNC2LI1Q8TCX1 351 aa11.99□□□□□ -0.49
VAPA-201ENST00000340541 SECTM1Q8WVN6 248 aa11.99□□□□□ -0.49
VAPA-201ENST00000340541 P2RX4Q99571 388 aa11.99□□□□□ -0.49
VAPA-201ENST00000340541 HSD17B10Q99714 261 aaKnown RBP11.99□□□□□ -0.49
VAPA-201ENST00000340541 TAS2R8Q9NYW2 309 aa11.99□□□□□ -0.49
VAPA-201ENST00000340541 EHFQ9NZC4 300 aa11.99□□□□□ -0.49
VAPA-201ENST00000340541 NUDT19A8MXV4 375 aa11.98□□□□□ -0.49
VAPA-201ENST00000340541 PMP2P02689 132 aa11.98□□□□□ -0.49
VAPA-201ENST00000340541 PF4P02776 101 aa11.98□□□□□ -0.49
VAPA-201ENST00000340541 IGLL1P15814 213 aa11.98□□□□□ -0.49
VAPA-201ENST00000340541 FXYD4P59646 89 aa11.98□□□□□ -0.49
VAPA-201ENST00000340541 UBE2KP61086 200 aa11.98□□□□□ -0.49
VAPA-201ENST00000340541 CBX3Q13185 183 aa11.98□□□□□ -0.49
VAPA-201ENST00000340541 FXYD3Q14802 87 aa11.98□□□□□ -0.49
VAPA-201ENST00000340541 AKIRIN2Q53H80 203 aa11.98□□□□□ -0.49
VAPA-201ENST00000340541 OR2B11Q5JQS5 317 aa11.98□□□□□ -0.49
VAPA-201ENST00000340541 ZNF66Q6ZN08 573 aa11.98□□□□□ -0.49
VAPA-201ENST00000340541 MFSD4AQ8N468 514 aa11.98□□□□□ -0.49
VAPA-201ENST00000340541 TCTEX1D1Q8N7M0 179 aa11.98□□□□□ -0.49
VAPA-201ENST00000340541 ARPC1AQ92747 370 aa11.98□□□□□ -0.49
VAPA-201ENST00000340541 RAX2Q96IS3 184 aa11.98□□□□□ -0.49
VAPA-201ENST00000340541 GPR61Q9BZJ8 451 aa11.98□□□□□ -0.49
VAPA-201ENST00000340541 SLC5A7Q9GZV3 580 aa11.98□□□□□ -0.49
VAPA-201ENST00000340541 FOXA2Q9Y261 457 aaPredicted RBP11.98□□□□□ -0.49
VAPA-201ENST00000340541 A3GALT2U3KPV4 340 aa11.98□□□□□ -0.49
VAPA-201ENST00000340541 A0A1W2PN81 502 aa11.97□□□□□ -0.49
VAPA-201ENST00000340541 FAM25AB3EWG3 89 aa11.97□□□□□ -0.49
VAPA-201ENST00000340541 FAM25CB3EWG5 89 aa11.97□□□□□ -0.49
VAPA-201ENST00000340541 FAM25GB3EWG6 89 aa11.97□□□□□ -0.49
VAPA-201ENST00000340541 SULT1C2O00338 296 aa11.97□□□□□ -0.49
VAPA-201ENST00000340541 CTDSP2O14595 271 aa11.97□□□□□ -0.49
VAPA-201ENST00000340541 TNFSF12O43508 249 aa11.97□□□□□ -0.49
VAPA-201ENST00000340541 HLA-DMAP28067 261 aa11.97□□□□□ -0.49
VAPA-201ENST00000340541 HRH1P35367 487 aa11.97□□□□□ -0.49
VAPA-201ENST00000340541 CHRNA7P36544 502 aa11.97□□□□□ -0.49
VAPA-201ENST00000340541 MYCNOSP40205 109 aa11.97□□□□□ -0.49
VAPA-201ENST00000340541 RAB9AP51151 201 aa11.97□□□□□ -0.49
VAPA-201ENST00000340541 TAS2R46P59540 309 aa11.97□□□□□ -0.49
VAPA-201ENST00000340541 DEFB136Q30KP8 78 aa11.97□□□□□ -0.49
VAPA-201ENST00000340541 IDO2Q6ZQW0 420 aa11.97□□□□□ -0.49
VAPA-201ENST00000340541 ZNF818PQ6ZRF7 136 aa11.97□□□□□ -0.49
VAPA-201ENST00000340541 ZNF491Q8N8L2 437 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms