RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 SAA2-SAA4A0A096LPE2 208 aa8.42□□□□□ -1.06
RBFOX1-202ENST00000340209 IFNL4K9M1U5 179 aa8.42□□□□□ -1.06
RBFOX1-202ENST00000340209 OR9G9P0C7N8 305 aa8.42□□□□□ -1.06
RBFOX1-202ENST00000340209 SAA2P0DJI9 122 aaPredicted RBP8.42□□□□□ -1.06
RBFOX1-202ENST00000340209 LYL1P12980 280 aa8.42□□□□□ -1.06
RBFOX1-202ENST00000340209 SULT1A1P50225 295 aa8.42□□□□□ -1.06
RBFOX1-202ENST00000340209 TNFRSF9Q07011 255 aa8.42□□□□□ -1.06
RBFOX1-202ENST00000340209 C14orf79Q96F83 325 aa8.42□□□□□ -1.06
RBFOX1-202ENST00000340209 GAFA1Q96PS6 74 aa8.42□□□□□ -1.06
RBFOX1-202ENST00000340209 OR4C12Q96R67 309 aa8.42□□□□□ -1.06
RBFOX1-202ENST00000340209 ATP5SQ99766 215 aa8.42□□□□□ -1.06
RBFOX1-202ENST00000340209 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.42□□□□□ -1.06
RBFOX1-202ENST00000340209 ZNF462Q96JM2 2506 aa8.42□□□□□ -1.06
RBFOX1-202ENST00000340209 PAX9P55771 341 aa8.42□□□□□ -1.06
RBFOX1-202ENST00000340209 HBG1P69891 147 aa8.42□□□□□ -1.06
RBFOX1-202ENST00000340209 HBG2P69892 147 aa8.42□□□□□ -1.06
RBFOX1-202ENST00000340209 ABHD12Q8N2K0 398 aa8.42□□□□□ -1.06
RBFOX1-202ENST00000340209 ISOC2Q96AB3 205 aa8.42□□□□□ -1.06
RBFOX1-202ENST00000340209 FAM122AQ96E09 287 aa8.42□□□□□ -1.06
RBFOX1-202ENST00000340209 CACFD1Q9UGQ2 172 aa8.42□□□□□ -1.06
RBFOX1-202ENST00000340209 STRAPQ9Y3F4 350 aaKnown RBP8.42□□□□□ -1.06
RBFOX1-202ENST00000340209 WSB1Q9Y6I7 421 aa8.42□□□□□ -1.06
RBFOX1-202ENST00000340209 PCP4L1A6NKN8 68 aa8.42□□□□□ -1.06
RBFOX1-202ENST00000340209 SHOXO15266 292 aa8.42□□□□□ -1.06
RBFOX1-202ENST00000340209 NDUFB3O43676 98 aa8.42□□□□□ -1.06
RBFOX1-202ENST00000340209 ATG12O94817 140 aa8.42□□□□□ -1.06
RBFOX1-202ENST00000340209 SNRPCP09234 159 aaKnown RBP8.42□□□□□ -1.06
RBFOX1-202ENST00000340209 FGF7P21781 194 aa8.42□□□□□ -1.06
RBFOX1-202ENST00000340209 SVBPQ8N300 66 aa8.42□□□□□ -1.06
RBFOX1-202ENST00000340209 RAB40CQ96S21 281 aa8.42□□□□□ -1.06
RBFOX1-202ENST00000340209 PITX3O75364 302 aa8.41□□□□□ -1.06
RBFOX1-202ENST00000340209 ADH4P08319 380 aa8.41□□□□□ -1.06
RBFOX1-202ENST00000340209 HOXD4P09016 255 aaPredicted RBP8.41□□□□□ -1.06
RBFOX1-202ENST00000340209 LMO1P25800 156 aa8.41□□□□□ -1.06
RBFOX1-202ENST00000340209 KLRB1Q12918 225 aa8.41□□□□□ -1.06
RBFOX1-202ENST00000340209 KIAA0141Q14154 515 aaPredicted RBP8.41□□□□□ -1.06
RBFOX1-202ENST00000340209 ZNF709Q8N972 641 aa8.41□□□□□ -1.06
RBFOX1-202ENST00000340209 RHOVQ96L33 236 aa8.41□□□□□ -1.06
RBFOX1-202ENST00000340209 IFT22Q9H7X7 185 aa8.41□□□□□ -1.06
RBFOX1-202ENST00000340209 ENY2Q9NPA8 101 aa8.41□□□□□ -1.06
RBFOX1-202ENST00000340209 TMEM106BQ9NUM4 274 aa8.41□□□□□ -1.06
RBFOX1-202ENST00000340209 MMP24Q9Y5R2 645 aa8.41□□□□□ -1.06
RBFOX1-202ENST00000340209 TLN2Q9Y4G6 2542 aa8.41□□□□□ -1.06
RBFOX1-202ENST00000340209 TRAV38-1A0A0B4J264 116 aa8.41□□□□□ -1.06
RBFOX1-202ENST00000340209 C15orf65H3BRN8 121 aa8.41□□□□□ -1.06
RBFOX1-202ENST00000340209 FGF16O43320 207 aa8.41□□□□□ -1.06
RBFOX1-202ENST00000340209 TSPAN9O75954 239 aa8.41□□□□□ -1.06
RBFOX1-202ENST00000340209 GAPDHP04406 335 aaKnown RBP8.41□□□□□ -1.06
RBFOX1-202ENST00000340209 HFEQ30201 348 aa8.41□□□□□ -1.06
RBFOX1-202ENST00000340209 CT45A1Q5HYN5 189 aa8.41□□□□□ -1.06
RBFOX1-202ENST00000340209 FAM122CQ6P4D5 195 aa8.41□□□□□ -1.06
RBFOX1-202ENST00000340209 MUC15Q8N387 334 aa8.41□□□□□ -1.06
RBFOX1-202ENST00000340209 CT45A3Q8NHU0 189 aa8.41□□□□□ -1.06
RBFOX1-202ENST00000340209 RNASE6Q93091 150 aaKnown RBP8.41□□□□□ -1.06
RBFOX1-202ENST00000340209 LURAP1Q96LR2 239 aa8.41□□□□□ -1.06
RBFOX1-202ENST00000340209 LAMP3Q9UQV4 416 aa8.41□□□□□ -1.06
RBFOX1-202ENST00000340209 URGCP-MRPS24S4R325 110 aa8.41□□□□□ -1.06
RBFOX1-202ENST00000340209 CFAP46Q8IYW2 2715 aa8.41□□□□□ -1.06
RBFOX1-202ENST00000340209 ABCA12Q86UK0 2595 aa8.41□□□□□ -1.06
RBFOX1-202ENST00000340209 IGLV3-9A0A075B6K5 115 aa8.41□□□□□ -1.06
RBFOX1-202ENST00000340209 UMAD1C9J7I0 102 aa8.41□□□□□ -1.06
RBFOX1-202ENST00000340209 PPIHO43447 177 aaKnown RBP8.41□□□□□ -1.06
RBFOX1-202ENST00000340209 UQCRFS1P47985 274 aa8.41□□□□□ -1.06
RBFOX1-202ENST00000340209 TFF3Q07654 80 aa8.41□□□□□ -1.06
RBFOX1-202ENST00000340209 C1orf87Q8N0U7 546 aa8.41□□□□□ -1.06
RBFOX1-202ENST00000340209 AIFM2Q9BRQ8 373 aa8.41□□□□□ -1.06
RBFOX1-202ENST00000340209 CSPG4Q6UVK1 2322 aa8.41□□□□□ -1.06
RBFOX1-202ENST00000340209 DUTP33316 252 aaKnown RBP8.4□□□□□ -1.06
RBFOX1-202ENST00000340209 C1orf229Q6ZS94 237 aaPredicted RBP8.4□□□□□ -1.06
RBFOX1-202ENST00000340209 OR10P1Q8NGE3 313 aa8.4□□□□□ -1.06
RBFOX1-202ENST00000340209 SSMEM1Q8WWF3 244 aa8.4□□□□□ -1.06
RBFOX1-202ENST00000340209 POM121Q96HA1 1249 aa8.4□□□□□ -1.06
RBFOX1-202ENST00000340209 TMEM140Q9NV12 185 aa8.4□□□□□ -1.06
RBFOX1-202ENST00000340209 ELOVL5Q9NYP7 299 aa8.4□□□□□ -1.06
RBFOX1-202ENST00000340209 CSMD1Q96PZ7 3565 aa8.4□□□□□ -1.06
RBFOX1-202ENST00000340209 USP9XQ93008 2570 aaPredicted RBP8.4□□□□□ -1.06
RBFOX1-202ENST00000340209 hADV38S2A0JD32 116 aa8.4□□□□□ -1.06
RBFOX1-202ENST00000340209 DVL1O14640 695 aa8.4□□□□□ -1.06
RBFOX1-202ENST00000340209 SPP1P10451 314 aa8.4□□□□□ -1.06
RBFOX1-202ENST00000340209 AKR1D1P51857 326 aa8.4□□□□□ -1.06
RBFOX1-202ENST00000340209 DIAPH2-AS1Q14236 149 aa8.4□□□□□ -1.06
RBFOX1-202ENST00000340209 LRRC10Q5BKY1 277 aa8.4□□□□□ -1.06
RBFOX1-202ENST00000340209 C2CD4CQ8TF44 421 aa8.4□□□□□ -1.06
RBFOX1-202ENST00000340209 HSD17B10Q99714 261 aaKnown RBP8.4□□□□□ -1.06
RBFOX1-202ENST00000340209 VKORC1Q9BQB6 163 aa8.4□□□□□ -1.06
RBFOX1-202ENST00000340209 TMEM204Q9BSN7 226 aa8.4□□□□□ -1.06
RBFOX1-202ENST00000340209 RNF115Q9Y4L5 304 aa8.4□□□□□ -1.06
RBFOX1-202ENST00000340209 TANC2Q9HCD6 1990 aa8.4□□□□□ -1.06
RBFOX1-202ENST00000340209 PTPN13Q12923 2485 aa8.4□□□□□ -1.06
RBFOX1-202ENST00000340209 KBTBD11-OT1A0A1B0GTJ5 212 aa8.4□□□□□ -1.07
RBFOX1-202ENST00000340209 DANCRP0C864 163 aa8.4□□□□□ -1.07
RBFOX1-202ENST00000340209 COL8A2P25067 703 aa8.4□□□□□ -1.07
RBFOX1-202ENST00000340209 UBE2G2P60604 165 aa8.4□□□□□ -1.07
RBFOX1-202ENST00000340209 RAB2AP61019 212 aa8.4□□□□□ -1.07
RBFOX1-202ENST00000340209 RAB11AP62491 216 aa8.4□□□□□ -1.07
RBFOX1-202ENST00000340209 GNB1P62873 340 aa8.4□□□□□ -1.07
RBFOX1-202ENST00000340209 SRSF7Q16629 238 aaKnown RBP eCLIP8.4□□□□□ -1.07
RBFOX1-202ENST00000340209 ZNF561Q8N587 486 aa8.4□□□□□ -1.07
RBFOX1-202ENST00000340209 ONECUT1Q9UBC0 465 aa8.4□□□□□ -1.07
RBFOX1-202ENST00000340209 UTP20O75691 2785 aaKnown RBP8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms