RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 KCNK15Q9H427 330 aa10.81□□□□□ -0.68
COMMD4-202ENST00000338995 DENRO43583 198 aaKnown RBP10.8□□□□□ -0.68
COMMD4-202ENST00000338995 DIRAS3O95661 229 aa10.8□□□□□ -0.68
COMMD4-202ENST00000338995 PSMA1P25786 263 aaKnown RBP10.8□□□□□ -0.68
COMMD4-202ENST00000338995 MAP2K4P45985 399 aa10.8□□□□□ -0.68
COMMD4-202ENST00000338995 CD81P60033 236 aa10.8□□□□□ -0.68
COMMD4-202ENST00000338995 TNXAQ16473 311 aa10.8□□□□□ -0.68
COMMD4-202ENST00000338995 C2orf76Q3KRA6 126 aa10.8□□□□□ -0.68
COMMD4-202ENST00000338995 SLC25A42Q86VD7 318 aa10.8□□□□□ -0.68
COMMD4-202ENST00000338995 FBLIM1Q8WUP2 373 aa10.8□□□□□ -0.68
COMMD4-202ENST00000338995 TMEM203Q969S6 136 aa10.8□□□□□ -0.68
COMMD4-202ENST00000338995 KCTD12Q96CX2 325 aaKnown RBP10.8□□□□□ -0.68
COMMD4-202ENST00000338995 SPIN2AQ99865 258 aa10.8□□□□□ -0.68
COMMD4-202ENST00000338995 SPIN2BQ9BPZ2 258 aa10.8□□□□□ -0.68
COMMD4-202ENST00000338995 NEURL2Q9BR09 285 aa10.8□□□□□ -0.68
COMMD4-202ENST00000338995 GINS4Q9BRT9 223 aa10.8□□□□□ -0.68
COMMD4-202ENST00000338995 FKBP14Q9NWM8 211 aa10.8□□□□□ -0.68
COMMD4-202ENST00000338995 SDHAF2Q9NX18 166 aa10.8□□□□□ -0.68
COMMD4-202ENST00000338995 RAB22AQ9UL26 194 aa10.8□□□□□ -0.68
COMMD4-202ENST00000338995 AK6Q9Y3D8 172 aaKnown RBP10.8□□□□□ -0.68
COMMD4-202ENST00000338995 DNAH7Q8WXX0 4024 aa10.8□□□□□ -0.68
COMMD4-202ENST00000338995 IGKV1-6A0A0C4DH72 117 aa10.79□□□□□ -0.68
COMMD4-202ENST00000338995 GNAO1P09471 354 aa10.79□□□□□ -0.68
COMMD4-202ENST00000338995 SNRPBP14678 240 aaKnown RBP10.79□□□□□ -0.68
COMMD4-202ENST00000338995 GADD45AP24522 165 aa10.79□□□□□ -0.68
COMMD4-202ENST00000338995 MECP2P51608 486 aaKnown RBP10.79□□□□□ -0.68
COMMD4-202ENST00000338995 UBE2KP61086 200 aa10.79□□□□□ -0.68
COMMD4-202ENST00000338995 RHOGP84095 191 aa10.79□□□□□ -0.68
COMMD4-202ENST00000338995 DYRK1AQ13627 763 aa10.79□□□□□ -0.68
COMMD4-202ENST00000338995 PRSS8Q16651 343 aa10.79□□□□□ -0.68
COMMD4-202ENST00000338995 LAIR2Q6ISS4 152 aa10.79□□□□□ -0.68
COMMD4-202ENST00000338995 ADAD2Q8NCV1 583 aaKnown RBP10.79□□□□□ -0.68
COMMD4-202ENST00000338995 OSR1Q8TAX0 266 aaPredicted RBP10.79□□□□□ -0.68
COMMD4-202ENST00000338995 ACOT12Q8WYK0 555 aa10.79□□□□□ -0.68
COMMD4-202ENST00000338995 FAM3DQ96BQ1 224 aa10.79□□□□□ -0.68
COMMD4-202ENST00000338995 RAB3CQ96E17 227 aa10.79□□□□□ -0.68
COMMD4-202ENST00000338995 THAP7Q9BT49 309 aaPredicted RBP10.79□□□□□ -0.68
COMMD4-202ENST00000338995 HIPK2Q9H2X6 1198 aa10.79□□□□□ -0.68
COMMD4-202ENST00000338995 TECRQ9NZ01 308 aaKnown RBP10.79□□□□□ -0.68
COMMD4-202ENST00000338995 DYNC2H1Q8NCM8 4307 aaKnown RBP10.78□□□□□ -0.68
COMMD4-202ENST00000338995 TRBV6-7A0A0A0MS04 114 aa10.78□□□□□ -0.68
COMMD4-202ENST00000338995 FOXI3A8MTJ6 420 aaPredicted RBP10.78□□□□□ -0.68
COMMD4-202ENST00000338995 APELAP0DMC3 54 aa10.78□□□□□ -0.68
COMMD4-202ENST00000338995 TALDO1P37837 337 aa10.78□□□□□ -0.68
COMMD4-202ENST00000338995 SSBP2P81877 361 aaPredicted RBP10.78□□□□□ -0.68
COMMD4-202ENST00000338995 GUCA2BQ16661 112 aa10.78□□□□□ -0.68
COMMD4-202ENST00000338995 LIPKQ5VXJ0 399 aa10.78□□□□□ -0.68
COMMD4-202ENST00000338995 DCUN1D5Q9BTE7 237 aa10.78□□□□□ -0.68
COMMD4-202ENST00000338995 PLEKHA3Q9HB20 300 aa10.78□□□□□ -0.68
COMMD4-202ENST00000338995 V9GY05 133 aa10.78□□□□□ -0.68
COMMD4-202ENST00000338995 SACSQ9NZJ4 4579 aa10.77□□□□□ -0.68
COMMD4-202ENST00000338995 IZUMO1RA6ND01 250 aa10.77□□□□□ -0.69
COMMD4-202ENST00000338995 SRRM4A7MD48 611 aaKnown RBP10.77□□□□□ -0.69
COMMD4-202ENST00000338995 OR11H12B2RN74 326 aa10.77□□□□□ -0.69
COMMD4-202ENST00000338995 CRYZL1O95825 349 aa10.77□□□□□ -0.69
COMMD4-202ENST00000338995 TRBV12-3P01733 135 aa10.77□□□□□ -0.69
COMMD4-202ENST00000338995 GSTT2P0CG29 244 aa10.77□□□□□ -0.69
COMMD4-202ENST00000338995 GSTT2BP0CG30 244 aa10.77□□□□□ -0.69
COMMD4-202ENST00000338995 HSMCR30P0CW71 290 aa10.77□□□□□ -0.69
COMMD4-202ENST00000338995 EXOSC2Q13868 293 aaKnown RBP10.77□□□□□ -0.69
COMMD4-202ENST00000338995 CD300EQ496F6 205 aaPredicted RBP10.77□□□□□ -0.69
COMMD4-202ENST00000338995 IGSF11Q5DX21 431 aa10.77□□□□□ -0.69
COMMD4-202ENST00000338995 LINC00322Q6ZN03 302 aaPredicted RBP10.77□□□□□ -0.69
COMMD4-202ENST00000338995 MMD2Q8IY49 270 aa10.77□□□□□ -0.69
COMMD4-202ENST00000338995 NECAP1Q8NC96 275 aa10.77□□□□□ -0.69
COMMD4-202ENST00000338995 SRSF12Q8WXF0 261 aaKnown RBP10.77□□□□□ -0.69
COMMD4-202ENST00000338995 AKIP1Q9NQ31 210 aa10.77□□□□□ -0.69
COMMD4-202ENST00000338995 ADAM30Q9UKF2 790 aa10.77□□□□□ -0.69
COMMD4-202ENST00000338995 PRELID3BQ9Y3B1 194 aa10.77□□□□□ -0.69
COMMD4-202ENST00000338995 TPRKBQ9Y3C4 175 aa10.77□□□□□ -0.69
COMMD4-202ENST00000338995 BIRC6Q9NR09 4857 aa10.76□□□□□ -0.69
COMMD4-202ENST00000338995 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.76□□□□□ -0.69
COMMD4-202ENST00000338995 DPPA5A6NC42 116 aa10.76□□□□□ -0.69
COMMD4-202ENST00000338995 METTL21EPA6NDL7 271 aa10.76□□□□□ -0.69
COMMD4-202ENST00000338995 CASQ2O14958 399 aaPredicted RBP10.76□□□□□ -0.69
COMMD4-202ENST00000338995 ARFRP1Q13795 201 aa10.76□□□□□ -0.69
COMMD4-202ENST00000338995 ARL6IP1Q15041 203 aa10.76□□□□□ -0.69
COMMD4-202ENST00000338995 DEFB114Q30KQ6 69 aa10.76□□□□□ -0.69
COMMD4-202ENST00000338995 PLAC9Q5JTB6 97 aa10.76□□□□□ -0.69
COMMD4-202ENST00000338995 SLC16A13Q7RTY0 426 aa10.76□□□□□ -0.69
COMMD4-202ENST00000338995 TTC9CQ8N5M4 171 aa10.76□□□□□ -0.69
COMMD4-202ENST00000338995 CABLES2Q9BTV7 478 aa10.76□□□□□ -0.69
COMMD4-202ENST00000338995 SRD5A3Q9H8P0 318 aa10.76□□□□□ -0.69
COMMD4-202ENST00000338995 TRBV9A0A0B4J1U6 114 aa10.75□□□□□ -0.69
COMMD4-202ENST00000338995 ZNF785A8K8V0 405 aa10.75□□□□□ -0.69
COMMD4-202ENST00000338995 BMPR1BO00238 502 aa10.75□□□□□ -0.69
COMMD4-202ENST00000338995 PDCD5O14737 125 aa10.75□□□□□ -0.69
COMMD4-202ENST00000338995 GGCTO75223 188 aaKnown RBP10.75□□□□□ -0.69
COMMD4-202ENST00000338995 SLC22A5O76082 557 aa10.75□□□□□ -0.69
COMMD4-202ENST00000338995 FCGR3AP08637 254 aa10.75□□□□□ -0.69
COMMD4-202ENST00000338995 FOLR2P14207 255 aa10.75□□□□□ -0.69
COMMD4-202ENST00000338995 CALRP27797 417 aaKnown RBP10.75□□□□□ -0.69
COMMD4-202ENST00000338995 DUTP33316 252 aaKnown RBP10.75□□□□□ -0.69
COMMD4-202ENST00000338995 KIR2DS2P43631 304 aa10.75□□□□□ -0.69
COMMD4-202ENST00000338995 CLDN12P56749 244 aa10.75□□□□□ -0.69
COMMD4-202ENST00000338995 DEFA5Q01523 94 aa10.75□□□□□ -0.69
COMMD4-202ENST00000338995 CDK10Q15131 360 aa10.75□□□□□ -0.69
COMMD4-202ENST00000338995 SSX1Q16384 188 aa10.75□□□□□ -0.69
COMMD4-202ENST00000338995 ANKRD55Q3KP44 614 aa10.75□□□□□ -0.69
COMMD4-202ENST00000338995 FAM106AQ4KMX7 169 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms