RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 DYNLRB1Q9NP97 96 aa13.38□□□□□ -0.27
SCNN1A-202ENST00000338748 TMEM106BQ9NUM4 274 aa13.38□□□□□ -0.27
SCNN1A-202ENST00000338748 STRAPQ9Y3F4 350 aaKnown RBP13.38□□□□□ -0.27
SCNN1A-202ENST00000338748 FBXO7Q9Y3I1 522 aa13.38□□□□□ -0.27
SCNN1A-202ENST00000338748 SFTA3P0C7M3 94 aa13.37□□□□□ -0.27
SCNN1A-202ENST00000338748 TAS2R30P59541 319 aa13.37□□□□□ -0.27
SCNN1A-202ENST00000338748 TAGLNQ01995 201 aaKnown RBP13.37□□□□□ -0.27
SCNN1A-202ENST00000338748 TMEM14EPQ6UXP3 125 aa13.37□□□□□ -0.27
SCNN1A-202ENST00000338748 THNSL2Q86YJ6 484 aa13.37□□□□□ -0.27
SCNN1A-202ENST00000338748 DDB2Q92466 427 aa13.37□□□□□ -0.27
SCNN1A-202ENST00000338748 QTRT1Q9BXR0 403 aaKnown RBP13.37□□□□□ -0.27
SCNN1A-202ENST00000338748 EGLN1Q9GZT9 426 aa13.37□□□□□ -0.27
SCNN1A-202ENST00000338748 SLC25A10Q9UBX3 287 aaPredicted RBP13.37□□□□□ -0.27
SCNN1A-202ENST00000338748 CARHSP1Q9Y2V2 147 aaKnown RBP13.37□□□□□ -0.27
SCNN1A-202ENST00000338748 PKD1L2Q7Z442 2459 aa13.37□□□□□ -0.27
SCNN1A-202ENST00000338748 TET2Q6N021 2002 aaPredicted RBP13.37□□□□□ -0.27
SCNN1A-202ENST00000338748 CACNA1AO00555 2505 aa13.37□□□□□ -0.27
SCNN1A-202ENST00000338748 TRAV38-1A0A0B4J264 116 aa13.37□□□□□ -0.27
SCNN1A-202ENST00000338748 RBMXL2O75526 392 aaKnown RBP13.37□□□□□ -0.27
SCNN1A-202ENST00000338748 CHRNB4P30926 498 aa13.37□□□□□ -0.27
SCNN1A-202ENST00000338748 CCL20P78556 96 aa13.37□□□□□ -0.27
SCNN1A-202ENST00000338748 OR8G2PQ6IF36 304 aa13.37□□□□□ -0.27
SCNN1A-202ENST00000338748 NKX6-2Q9C056 277 aaPredicted RBP13.37□□□□□ -0.27
SCNN1A-202ENST00000338748 LINC00574Q9H8X3 128 aa13.37□□□□□ -0.27
SCNN1A-202ENST00000338748 IDI2-AS1Q9NZ38 188 aa13.37□□□□□ -0.27
SCNN1A-202ENST00000338748 ASH1LQ9NR48 2969 aaKnown RBP13.36□□□□□ -0.27
SCNN1A-202ENST00000338748 PPIAL4EA0A075B759 164 aa13.36□□□□□ -0.27
SCNN1A-202ENST00000338748 TRAV3A0A0B4J244 114 aa13.36□□□□□ -0.27
SCNN1A-202ENST00000338748 NKX6-3A6NJ46 265 aa13.36□□□□□ -0.27
SCNN1A-202ENST00000338748 PPIAL4DF5H284 164 aa13.36□□□□□ -0.27
SCNN1A-202ENST00000338748 TRIM77I1YAP6 450 aa13.36□□□□□ -0.27
SCNN1A-202ENST00000338748 DNASE2O00115 360 aaPredicted RBP13.36□□□□□ -0.27
SCNN1A-202ENST00000338748 DFFBO76075 338 aa13.36□□□□□ -0.27
SCNN1A-202ENST00000338748 PPIAL4FP0DN26 164 aa13.36□□□□□ -0.27
SCNN1A-202ENST00000338748 CCL3L1P16619 93 aa13.36□□□□□ -0.27
SCNN1A-202ENST00000338748 ATF4P18848 351 aaPredicted RBP13.36□□□□□ -0.27
SCNN1A-202ENST00000338748 PLA2G5P39877 138 aa13.36□□□□□ -0.27
SCNN1A-202ENST00000338748 DVL1P1P54792 670 aaPredicted RBP13.36□□□□□ -0.27
SCNN1A-202ENST00000338748 LY6DQ14210 128 aa13.36□□□□□ -0.27
SCNN1A-202ENST00000338748 LYG1Q8N1E2 194 aa13.36□□□□□ -0.27
SCNN1A-202ENST00000338748 DTD1Q8TEA8 209 aa13.36□□□□□ -0.27
SCNN1A-202ENST00000338748 CTSZQ9UBR2 303 aa13.36□□□□□ -0.27
SCNN1A-202ENST00000338748 PPIAL4AQ9Y536 164 aa13.36□□□□□ -0.27
SCNN1A-202ENST00000338748 ZNF729A6NN14 1252 aaPredicted RBP13.36□□□□□ -0.27
SCNN1A-202ENST00000338748 CD3EP07766 207 aa13.36□□□□□ -0.27
SCNN1A-202ENST00000338748 FBXL19-AS1Q494R0 122 aa13.36□□□□□ -0.27
SCNN1A-202ENST00000338748 SPSB3Q6PJ21 355 aa13.36□□□□□ -0.27
SCNN1A-202ENST00000338748 CD300LFQ8TDQ1 290 aa13.36□□□□□ -0.27
SCNN1A-202ENST00000338748 CORO2AQ92828 525 aa13.36□□□□□ -0.27
SCNN1A-202ENST00000338748 GNPNAT1Q96EK6 184 aaPredicted RBP13.36□□□□□ -0.27
SCNN1A-202ENST00000338748 SEC11CQ9BY50 192 aa13.36□□□□□ -0.27
SCNN1A-202ENST00000338748 LAMP3Q9UQV4 416 aa13.36□□□□□ -0.27
SCNN1A-202ENST00000338748 ITGB1BP1O14713 200 aa13.35□□□□□ -0.27
SCNN1A-202ENST00000338748 HPRT1P00492 218 aa13.35□□□□□ -0.27
SCNN1A-202ENST00000338748 RPL31P62899 125 aaKnown RBP13.35□□□□□ -0.27
SCNN1A-202ENST00000338748 HNF4GQ14541 408 aa13.35□□□□□ -0.27
SCNN1A-202ENST00000338748 GUK1Q16774 197 aa13.35□□□□□ -0.27
SCNN1A-202ENST00000338748 SLC25A24Q6NUK1 477 aa13.35□□□□□ -0.27
SCNN1A-202ENST00000338748 LILRB2Q8N423 598 aa13.35□□□□□ -0.27
SCNN1A-202ENST00000338748 ZNF383Q8NA42 475 aa13.35□□□□□ -0.27
SCNN1A-202ENST00000338748 VSIRQ9H7M9 311 aa13.35□□□□□ -0.27
SCNN1A-202ENST00000338748 RPUSD1Q9UJJ7 312 aaKnown RBP13.35□□□□□ -0.27
SCNN1A-202ENST00000338748 LINC00312Q9Y6C7 94 aa13.35□□□□□ -0.27
SCNN1A-202ENST00000338748 PMS2P5A8MQ11 134 aa13.35□□□□□ -0.27
SCNN1A-202ENST00000338748 UMAD1C9J7I0 102 aa13.35□□□□□ -0.27
SCNN1A-202ENST00000338748 TNFRSF13BO14836 293 aaPredicted RBP13.35□□□□□ -0.27
SCNN1A-202ENST00000338748 APOBEC3AP31941 199 aaPredicted RBP13.35□□□□□ -0.27
SCNN1A-202ENST00000338748 PPT1P50897 306 aa13.35□□□□□ -0.27
SCNN1A-202ENST00000338748 RAB7AP51149 207 aa13.35□□□□□ -0.27
SCNN1A-202ENST00000338748 SLC38A11Q08AI6 406 aa13.35□□□□□ -0.27
SCNN1A-202ENST00000338748 SVBPQ8N300 66 aa13.35□□□□□ -0.27
SCNN1A-202ENST00000338748 FAM216AQ8WUB2 273 aa13.35□□□□□ -0.27
SCNN1A-202ENST00000338748 S1PR3Q99500 378 aa13.35□□□□□ -0.27
SCNN1A-202ENST00000338748 SVEP1Q4LDE5 3571 aa13.34□□□□□ -0.27
SCNN1A-202ENST00000338748 UBE2L5PA0A1B0GUS4 154 aa13.34□□□□□ -0.27
SCNN1A-202ENST00000338748 PPIHO43447 177 aaKnown RBP13.34□□□□□ -0.27
SCNN1A-202ENST00000338748 IFNA5P01569 189 aa13.34□□□□□ -0.27
SCNN1A-202ENST00000338748 NPBWR1P48145 328 aa13.34□□□□□ -0.27
SCNN1A-202ENST00000338748 C1orf87Q8N0U7 546 aa13.34□□□□□ -0.27
SCNN1A-202ENST00000338748 CISD1Q9NZ45 108 aaKnown RBP13.34□□□□□ -0.27
SCNN1A-202ENST00000338748 TNCP24821 2201 aa13.34□□□□□ -0.27
SCNN1A-202ENST00000338748 hADV38S2A0JD32 116 aa13.33□□□□□ -0.27
SCNN1A-202ENST00000338748 VSTM5A8MXK1 200 aa13.33□□□□□ -0.27
SCNN1A-202ENST00000338748 LYNX1G3V0Z9 82 aa13.33□□□□□ -0.27
SCNN1A-202ENST00000338748 RBFOX2O43251 390 aaKnown RBP eCLIP13.33□□□□□ -0.27
SCNN1A-202ENST00000338748 LYNX1P0DP58 116 aa13.33□□□□□ -0.27
SCNN1A-202ENST00000338748 HBG1P69891 147 aa13.33□□□□□ -0.27
SCNN1A-202ENST00000338748 HBG2P69892 147 aa13.33□□□□□ -0.27
SCNN1A-202ENST00000338748 MRPS11P82912 194 aaKnown RBP13.33□□□□□ -0.27
SCNN1A-202ENST00000338748 EFNB3Q15768 340 aa13.33□□□□□ -0.27
SCNN1A-202ENST00000338748 TMEM88Q6PEY1 159 aa13.33□□□□□ -0.27
SCNN1A-202ENST00000338748 ZCCHC14Q8WYQ9 949 aaKnown RBP13.33□□□□□ -0.27
SCNN1A-202ENST00000338748 COL12A1Q99715 3063 aa13.33□□□□□ -0.28
SCNN1A-202ENST00000338748 CEBPZOSA8MTT3 80 aa13.33□□□□□ -0.28
SCNN1A-202ENST00000338748 LRRC75BQ2VPJ9 315 aa13.33□□□□□ -0.28
SCNN1A-202ENST00000338748 AKR1C8PQ5T2L2 129 aa13.33□□□□□ -0.28
SCNN1A-202ENST00000338748 TMEM200BQ69YZ2 307 aa13.33□□□□□ -0.28
SCNN1A-202ENST00000338748 SP5Q6BEB4 398 aaPredicted RBP13.33□□□□□ -0.28
SCNN1A-202ENST00000338748 SLC25A48Q6ZT89 311 aaKnown RBP13.33□□□□□ -0.28
SCNN1A-202ENST00000338748 RARRES2Q99969 163 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms