RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 PDLIM3Q53GG5 364 aaPredicted RBP13.32□□□□□ -0.28
HPS1-202ENST00000338546 ZNF295-AS1Q8N0V1 137 aa13.32□□□□□ -0.28
HPS1-202ENST00000338546 OR8B3Q8NGG8 313 aa13.32□□□□□ -0.28
HPS1-202ENST00000338546 OR1S2Q8NGQ3 325 aa13.32□□□□□ -0.28
HPS1-202ENST00000338546 NEIL1Q96FI4 390 aaPredicted RBP13.32□□□□□ -0.28
HPS1-202ENST00000338546 OR8B2Q96RD0 313 aa13.32□□□□□ -0.28
HPS1-202ENST00000338546 PSENENQ9NZ42 101 aa13.32□□□□□ -0.28
HPS1-202ENST00000338546 SESN1Q9Y6P5 492 aa13.32□□□□□ -0.28
HPS1-202ENST00000338546 LYNX1G3V0Z9 82 aa13.32□□□□□ -0.28
HPS1-202ENST00000338546 HRASP01112 189 aa13.32□□□□□ -0.28
HPS1-202ENST00000338546 IGHV3-7P01780 117 aa13.32□□□□□ -0.28
HPS1-202ENST00000338546 LYNX1P0DP58 116 aa13.32□□□□□ -0.28
HPS1-202ENST00000338546 SPP1P10451 314 aa13.32□□□□□ -0.28
HPS1-202ENST00000338546 GNG10P50151 68 aa13.32□□□□□ -0.28
HPS1-202ENST00000338546 ZNF137PP52743 207 aa13.32□□□□□ -0.28
HPS1-202ENST00000338546 BLOC1S1P78537 153 aa13.32□□□□□ -0.28
HPS1-202ENST00000338546 UTF1Q5T230 341 aa13.32□□□□□ -0.28
HPS1-202ENST00000338546 C1orf229Q6ZS94 237 aaPredicted RBP13.32□□□□□ -0.28
HPS1-202ENST00000338546 OR5C1Q8NGR4 320 aa13.32□□□□□ -0.28
HPS1-202ENST00000338546 TMEM186Q96B77 213 aa13.32□□□□□ -0.28
HPS1-202ENST00000338546 RBKSQ9H477 322 aa13.32□□□□□ -0.28
HPS1-202ENST00000338546 A0A1W2PPE3 182 aa13.31□□□□□ -0.28
HPS1-202ENST00000338546 A6NNC1 897 aa13.31□□□□□ -0.28
HPS1-202ENST00000338546 J3QR06 171 aa13.31□□□□□ -0.28
HPS1-202ENST00000338546 FGF2P09038 288 aa13.31□□□□□ -0.28
HPS1-202ENST00000338546 LINC00205P59089 165 aa13.31□□□□□ -0.28
HPS1-202ENST00000338546 HBG1P69891 147 aa13.31□□□□□ -0.28
HPS1-202ENST00000338546 HBG2P69892 147 aa13.31□□□□□ -0.28
HPS1-202ENST00000338546 RTL8BQ17RB0 113 aa13.31□□□□□ -0.28
HPS1-202ENST00000338546 ZNF429Q86V71 674 aa13.31□□□□□ -0.28
HPS1-202ENST00000338546 ZNF383Q8NA42 475 aa13.31□□□□□ -0.28
HPS1-202ENST00000338546 OR9G1Q8NH87 305 aa13.31□□□□□ -0.28
HPS1-202ENST00000338546 ATP5SQ99766 215 aa13.31□□□□□ -0.28
HPS1-202ENST00000338546 YLPM1P49750 1951 aaKnown RBP13.31□□□□□ -0.28
HPS1-202ENST00000338546 hCG_1809904A0A1W2PP81 198 aa13.3□□□□□ -0.28
HPS1-202ENST00000338546 A0A1W2PPE2 198 aa13.3□□□□□ -0.28
HPS1-202ENST00000338546 A0A1W2PR64 198 aa13.3□□□□□ -0.28
HPS1-202ENST00000338546 A0A1W2PRV1 198 aa13.3□□□□□ -0.28
HPS1-202ENST00000338546 B8ZZF3 427 aa13.3□□□□□ -0.28
HPS1-202ENST00000338546 NXPH3O95157 252 aa13.3□□□□□ -0.28
HPS1-202ENST00000338546 CT45A6P0DMU7 189 aa13.3□□□□□ -0.28
HPS1-202ENST00000338546 CT45A5P0DMU8 189 aa13.3□□□□□ -0.28
HPS1-202ENST00000338546 CT45A7P0DMV0 189 aa13.3□□□□□ -0.28
HPS1-202ENST00000338546 IGHV1-8P0DP01 117 aa13.3□□□□□ -0.28
HPS1-202ENST00000338546 DYNLT3P51808 116 aa13.3□□□□□ -0.28
HPS1-202ENST00000338546 CLEC9AQ6UXN8 241 aa13.3□□□□□ -0.28
HPS1-202ENST00000338546 TMEM14EPQ6UXP3 125 aa13.3□□□□□ -0.28
HPS1-202ENST00000338546 OR4A16Q8NH70 328 aa13.3□□□□□ -0.28
HPS1-202ENST00000338546 GNPNAT1Q96EK6 184 aaPredicted RBP13.3□□□□□ -0.28
HPS1-202ENST00000338546 RAB19A4D1S5 217 aa13.29□□□□□ -0.28
HPS1-202ENST00000338546 ZNF705EA8MWA4 302 aaPredicted RBP13.29□□□□□ -0.28
HPS1-202ENST00000338546 A8MXK9 166 aa13.29□□□□□ -0.28
HPS1-202ENST00000338546 C19orf84I3L1E1 186 aa13.29□□□□□ -0.28
HPS1-202ENST00000338546 CST7O76096 145 aa13.29□□□□□ -0.28
HPS1-202ENST00000338546 F12P00748 615 aaPredicted RBP13.29□□□□□ -0.28
HPS1-202ENST00000338546 IL3RAP26951 378 aa13.29□□□□□ -0.28
HPS1-202ENST00000338546 SPCS3P61009 180 aa13.29□□□□□ -0.28
HPS1-202ENST00000338546 WDR25Q64LD2 544 aaPredicted RBP13.29□□□□□ -0.28
HPS1-202ENST00000338546 UQCC3Q6UW78 93 aa13.29□□□□□ -0.28
HPS1-202ENST00000338546 C11orf42Q8N5U0 333 aa13.29□□□□□ -0.28
HPS1-202ENST00000338546 TSNAXQ99598 290 aaKnown RBP13.29□□□□□ -0.28
HPS1-202ENST00000338546 PCGF1Q9BSM1 259 aa13.29□□□□□ -0.28
HPS1-202ENST00000338546 PARD6GQ9BYG4 376 aaPredicted RBP13.29□□□□□ -0.28
HPS1-202ENST00000338546 TMEM133Q9H2Q1 129 aa13.29□□□□□ -0.28
HPS1-202ENST00000338546 PARP11Q9NR21 331 aa13.29□□□□□ -0.28
HPS1-202ENST00000338546 STRAPQ9Y3F4 350 aaKnown RBP13.29□□□□□ -0.28
HPS1-202ENST00000338546 A0A1W2PPR1 153 aa13.28□□□□□ -0.28
HPS1-202ENST00000338546 PPIHO43447 177 aaKnown RBP13.28□□□□□ -0.28
HPS1-202ENST00000338546 CLINT1Q14677 625 aa13.28□□□□□ -0.28
HPS1-202ENST00000338546 ATP6V1FQ16864 119 aa13.28□□□□□ -0.28
HPS1-202ENST00000338546 LY6G5BQ8NDX9 201 aa13.28□□□□□ -0.28
HPS1-202ENST00000338546 OR5AN1Q8NGI8 311 aa13.28□□□□□ -0.28
HPS1-202ENST00000338546 OR10X1Q8NGY0 326 aa13.28□□□□□ -0.28
HPS1-202ENST00000338546 DTD1Q8TEA8 209 aa13.28□□□□□ -0.28
HPS1-202ENST00000338546 MARC2Q969Z3 335 aa13.28□□□□□ -0.28
HPS1-202ENST00000338546 PATZ1Q9HBE1 687 aaKnown RBP13.28□□□□□ -0.28
HPS1-202ENST00000338546 TMEM140Q9NV12 185 aa13.28□□□□□ -0.28
HPS1-202ENST00000338546 UMAD1C9J7I0 102 aa13.28□□□□□ -0.28
HPS1-202ENST00000338546 KRBOX1C9JBD0 128 aa13.28□□□□□ -0.28
HPS1-202ENST00000338546 TRIM77I1YAP6 450 aa13.28□□□□□ -0.28
HPS1-202ENST00000338546 I3L521 148 aa13.28□□□□□ -0.28
HPS1-202ENST00000338546 FBXO24O75426 580 aa13.28□□□□□ -0.28
HPS1-202ENST00000338546 RBMXL2O75526 392 aaKnown RBP13.28□□□□□ -0.28
HPS1-202ENST00000338546 CRYZL1O95825 349 aa13.28□□□□□ -0.28
HPS1-202ENST00000338546 APOA2P02652 100 aa13.28□□□□□ -0.28
HPS1-202ENST00000338546 OR9G9P0C7N8 305 aa13.28□□□□□ -0.28
HPS1-202ENST00000338546 IAPPP10997 89 aa13.28□□□□□ -0.28
HPS1-202ENST00000338546 RPP30P78346 268 aaKnown RBP13.28□□□□□ -0.28
HPS1-202ENST00000338546 RELBQ01201 579 aa13.28□□□□□ -0.28
HPS1-202ENST00000338546 IL34Q6ZMJ4 242 aa13.28□□□□□ -0.28
HPS1-202ENST00000338546 PUSL1Q8N0Z8 303 aaKnown RBP13.28□□□□□ -0.28
HPS1-202ENST00000338546 OSR1Q8TAX0 266 aaPredicted RBP13.28□□□□□ -0.28
HPS1-202ENST00000338546 ST6GALNAC6Q969X2 333 aa13.28□□□□□ -0.28
HPS1-202ENST00000338546 SLC35D1Q9NTN3 355 aa13.28□□□□□ -0.28
HPS1-202ENST00000338546 KLF2Q9Y5W3 355 aaPredicted RBP13.28□□□□□ -0.28
HPS1-202ENST00000338546 DOCK11Q5JSL3 2073 aa13.27□□□□□ -0.28
HPS1-202ENST00000338546 PPIAL4CA0A0B4J2A2 164 aa13.27□□□□□ -0.29
HPS1-202ENST00000338546 IFNA5P01569 189 aa13.27□□□□□ -0.29
HPS1-202ENST00000338546 IL6RP08887 468 aaPredicted RBP13.27□□□□□ -0.29
HPS1-202ENST00000338546 OR8U8P0C7N1 319 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms