RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 ANKRD36A6QL64 1941 aa13.79□□□□□ -0.2
NPHP3-201ENST00000337331 CDKN1BP46527 198 aa13.78□□□□□ -0.2
NPHP3-201ENST00000337331 FAM162BQ5T6X4 162 aa13.78□□□□□ -0.2
NPHP3-201ENST00000337331 OR4S2Q8NH73 311 aa13.78□□□□□ -0.2
NPHP3-201ENST00000337331 NDFIP1Q9BT67 221 aa13.78□□□□□ -0.2
NPHP3-201ENST00000337331 TIMM9Q9Y5J7 89 aa13.78□□□□□ -0.2
NPHP3-201ENST00000337331 SERF2P84101 59 aa13.78□□□□□ -0.2
NPHP3-201ENST00000337331 OR51G1Q8NGK1 321 aa13.78□□□□□ -0.2
NPHP3-201ENST00000337331 CTXND1A0A1B0GTU2 59 aa13.78□□□□□ -0.2
NPHP3-201ENST00000337331 hADV38S2A0JD32 116 aa13.78□□□□□ -0.2
NPHP3-201ENST00000337331 PSG1P11464 419 aa13.78□□□□□ -0.2
NPHP3-201ENST00000337331 SLC25A47Q6Q0C1 308 aa13.78□□□□□ -0.2
NPHP3-201ENST00000337331 SLC25A40Q8TBP6 338 aa13.78□□□□□ -0.2
NPHP3-201ENST00000337331 SCARF2Q96GP6 870 aaPredicted RBP13.78□□□□□ -0.2
NPHP3-201ENST00000337331 CASP8AP2Q9UKL3 1982 aa13.78□□□□□ -0.2
NPHP3-201ENST00000337331 AMMECR1LQ6DCA0 310 aa13.78□□□□□ -0.2
NPHP3-201ENST00000337331 VWA1Q6PCB0 445 aa13.78□□□□□ -0.2
NPHP3-201ENST00000337331 OR2M7Q8NG81 312 aa13.78□□□□□ -0.2
NPHP3-201ENST00000337331 HSD17B10Q99714 261 aaKnown RBP13.78□□□□□ -0.2
NPHP3-201ENST00000337331 SH2D2AQ9NP31 389 aa13.78□□□□□ -0.2
NPHP3-201ENST00000337331 CCL25O15444 150 aa13.77□□□□□ -0.2
NPHP3-201ENST00000337331 PMCHL1Q16048 86 aa13.77□□□□□ -0.2
NPHP3-201ENST00000337331 C12orf54Q6X4T0 127 aa13.77□□□□□ -0.2
NPHP3-201ENST00000337331 OR2T6Q8NHC8 308 aa13.77□□□□□ -0.2
NPHP3-201ENST00000337331 ZNF519Q8TB69 540 aa13.77□□□□□ -0.2
NPHP3-201ENST00000337331 RAB37Q96AX2 223 aa13.77□□□□□ -0.2
NPHP3-201ENST00000337331 OOEPA6NGQ2 149 aa13.77□□□□□ -0.21
NPHP3-201ENST00000337331 RBP4P02753 201 aa13.77□□□□□ -0.21
NPHP3-201ENST00000337331 GZMHP20718 246 aa13.77□□□□□ -0.21
NPHP3-201ENST00000337331 ADMP35318 185 aa13.77□□□□□ -0.21
NPHP3-201ENST00000337331 G6PCP35575 357 aa13.77□□□□□ -0.21
NPHP3-201ENST00000337331 LCN2P80188 198 aa13.77□□□□□ -0.21
NPHP3-201ENST00000337331 ARTNQ5T4W7 220 aa13.77□□□□□ -0.21
NPHP3-201ENST00000337331 FNDC7Q5VTL7 733 aa13.77□□□□□ -0.21
NPHP3-201ENST00000337331 WDR73Q6P4I2 378 aa13.77□□□□□ -0.21
NPHP3-201ENST00000337331 OR8I2Q8N0Y5 310 aa13.77□□□□□ -0.21
NPHP3-201ENST00000337331 A0A0G2JMZ2 1700 aa13.77□□□□□ -0.21
NPHP3-201ENST00000337331 LRRC37A2A6NM11 1700 aa13.77□□□□□ -0.21
NPHP3-201ENST00000337331 COMPP49747 757 aaPredicted RBP13.77□□□□□ -0.21
NPHP3-201ENST00000337331 TCTAP57738 103 aa13.77□□□□□ -0.21
NPHP3-201ENST00000337331 TRIP6Q15654 476 aaKnown RBP13.77□□□□□ -0.21
NPHP3-201ENST00000337331 FBXW9Q5XUX1 488 aa13.77□□□□□ -0.21
NPHP3-201ENST00000337331 FDX2Q6P4F2 183 aa13.77□□□□□ -0.21
NPHP3-201ENST00000337331 AGFG2O95081 481 aa13.76□□□□□ -0.21
NPHP3-201ENST00000337331 SLC25A5P05141 298 aaKnown RBP13.76□□□□□ -0.21
NPHP3-201ENST00000337331 BMI1P35226 326 aa13.76□□□□□ -0.21
NPHP3-201ENST00000337331 OCIAD2Q56VL3 154 aa13.76□□□□□ -0.21
NPHP3-201ENST00000337331 STPG4Q8N801 248 aa13.76□□□□□ -0.21
NPHP3-201ENST00000337331 NRN1Q9NPD7 142 aa13.76□□□□□ -0.21
NPHP3-201ENST00000337331 FAM206AQ9NX38 181 aa13.76□□□□□ -0.21
NPHP3-201ENST00000337331 MRPS18CQ9Y3D5 142 aaKnown RBP13.76□□□□□ -0.21
NPHP3-201ENST00000337331 AESQ08117 197 aa13.76□□□□□ -0.21
NPHP3-201ENST00000337331 RHBDL1O75783 438 aa13.76□□□□□ -0.21
NPHP3-201ENST00000337331 OR4C12Q96R67 309 aa13.76□□□□□ -0.21
NPHP3-201ENST00000337331 CST9LQ9H4G1 147 aa13.76□□□□□ -0.21
NPHP3-201ENST00000337331 G6PC2Q9NQR9 355 aa13.76□□□□□ -0.21
NPHP3-201ENST00000337331 CTSSP25774 331 aa13.76□□□□□ -0.21
NPHP3-201ENST00000337331 SRIP30626 198 aa13.76□□□□□ -0.21
NPHP3-201ENST00000337331 TPRX1Q8N7U7 411 aa13.76□□□□□ -0.21
NPHP3-201ENST00000337331 BLNKQ8WV28 456 aa13.76□□□□□ -0.21
NPHP3-201ENST00000337331 RPEQ96AT9 228 aa13.76□□□□□ -0.21
NPHP3-201ENST00000337331 PLA2G2EQ9NZK7 142 aa13.76□□□□□ -0.21
NPHP3-201ENST00000337331 TMEM238C9JI98 176 aa13.75□□□□□ -0.21
NPHP3-201ENST00000337331 SCTP09683 121 aa13.75□□□□□ -0.21
NPHP3-201ENST00000337331 MDP1Q86V88 176 aa13.75□□□□□ -0.21
NPHP3-201ENST00000337331 A0A1B0GW64 132 aa13.75□□□□□ -0.21
NPHP3-201ENST00000337331 TMPRSS2O15393 492 aa13.75□□□□□ -0.21
NPHP3-201ENST00000337331 SMPD2O60906 423 aa13.75□□□□□ -0.21
NPHP3-201ENST00000337331 LYPD3O95274 346 aa13.75□□□□□ -0.21
NPHP3-201ENST00000337331 IGKV3-11P04433 115 aa13.75□□□□□ -0.21
NPHP3-201ENST00000337331 LYL1P12980 280 aa13.75□□□□□ -0.21
NPHP3-201ENST00000337331 RND2P52198 227 aa13.75□□□□□ -0.21
NPHP3-201ENST00000337331 UBE2L3P68036 154 aaKnown RBP13.75□□□□□ -0.21
NPHP3-201ENST00000337331 IGLV3-21P80748 117 aaPredicted RBP13.75□□□□□ -0.21
NPHP3-201ENST00000337331 SMAGPQ0VAQ4 97 aa13.75□□□□□ -0.21
NPHP3-201ENST00000337331 SPSB3Q6PJ21 355 aa13.75□□□□□ -0.21
NPHP3-201ENST00000337331 C20orf144Q9BQM9 153 aa13.75□□□□□ -0.21
NPHP3-201ENST00000337331 TMEM191AQ9H0A3 160 aa13.75□□□□□ -0.21
NPHP3-201ENST00000337331 EPOPA6NHQ4 379 aa13.75□□□□□ -0.21
NPHP3-201ENST00000337331 ORM2P19652 201 aa13.75□□□□□ -0.21
NPHP3-201ENST00000337331 MOGAT3Q86VF5 341 aa13.75□□□□□ -0.21
NPHP3-201ENST00000337331 OR1L4Q8NGR5 311 aa13.75□□□□□ -0.21
NPHP3-201ENST00000337331 NEURL1O76050 574 aa13.74□□□□□ -0.21
NPHP3-201ENST00000337331 RELBQ01201 579 aa13.74□□□□□ -0.21
NPHP3-201ENST00000337331 TMEM222Q9H0R3 208 aa13.74□□□□□ -0.21
NPHP3-201ENST00000337331 COX11Q9Y6N1 276 aa13.74□□□□□ -0.21
NPHP3-201ENST00000337331 C21orf140B9A014 251 aa13.74□□□□□ -0.21
NPHP3-201ENST00000337331 TMEM250H0YL14 139 aa13.74□□□□□ -0.21
NPHP3-201ENST00000337331 ADTRPQ96IZ2 230 aa13.74□□□□□ -0.21
NPHP3-201ENST00000337331 MGAMO43451 1857 aa13.74□□□□□ -0.21
NPHP3-201ENST00000337331 NCBP2LA6PVI3 153 aaKnown RBP13.74□□□□□ -0.21
NPHP3-201ENST00000337331 IGFBP3P17936 291 aaPredicted RBP13.74□□□□□ -0.21
NPHP3-201ENST00000337331 COX7A1P24310 79 aa13.74□□□□□ -0.21
NPHP3-201ENST00000337331 SLC25A34Q6PIV7 304 aa13.74□□□□□ -0.21
NPHP3-201ENST00000337331 DNM1P46Q6ZS02 220 aa13.74□□□□□ -0.21
NPHP3-201ENST00000337331 C1QL2Q7Z5L3 287 aa13.74□□□□□ -0.21
NPHP3-201ENST00000337331 OR4P4Q8NGL7 312 aa13.74□□□□□ -0.21
NPHP3-201ENST00000337331 GREB1Q4ZG55 1949 aa13.74□□□□□ -0.21
NPHP3-201ENST00000337331 TDGF1P13385 188 aa13.74□□□□□ -0.21
NPHP3-201ENST00000337331 GLRX2Q9NS18 164 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms