RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 CT45A5P0DMU8 189 aa11.33□□□□□ -0.6
COL2A1-201ENST00000337299 CT45A7P0DMV0 189 aa11.33□□□□□ -0.6
COL2A1-201ENST00000337299 CT45A1Q5HYN5 189 aa11.33□□□□□ -0.6
COL2A1-201ENST00000337299 SLC25A47Q6Q0C1 308 aa11.33□□□□□ -0.6
COL2A1-201ENST00000337299 CT45A3Q8NHU0 189 aa11.33□□□□□ -0.6
COL2A1-201ENST00000337299 LRRK1Q38SD2 2015 aa11.33□□□□□ -0.6
COL2A1-201ENST00000337299 ARHGAP21Q5T5U3 1957 aa11.33□□□□□ -0.6
COL2A1-201ENST00000337299 CUL9Q8IWT3 2517 aa11.33□□□□□ -0.6
COL2A1-201ENST00000337299 S1PR2O95136 353 aa11.32□□□□□ -0.6
COL2A1-201ENST00000337299 CCL7P80098 99 aa11.32□□□□□ -0.6
COL2A1-201ENST00000337299 COX19Q49B96 90 aa11.32□□□□□ -0.6
COL2A1-201ENST00000337299 ZDHHC16Q969W1 377 aa11.32□□□□□ -0.6
COL2A1-201ENST00000337299 CYYR1Q96J86 154 aa11.32□□□□□ -0.6
COL2A1-201ENST00000337299 ARRDC1-AS1Q9H2J1 176 aa11.32□□□□□ -0.6
COL2A1-201ENST00000337299 AKIRIN1Q9H9L7 192 aaPredicted RBP11.32□□□□□ -0.6
COL2A1-201ENST00000337299 ATP23Q9Y6H3 246 aa11.32□□□□□ -0.6
COL2A1-201ENST00000337299 FER1L5A0AVI2 2057 aa11.32□□□□□ -0.6
COL2A1-201ENST00000337299 GALR2O43603 387 aaPredicted RBP11.32□□□□□ -0.6
COL2A1-201ENST00000337299 GNG7O60262 68 aa11.32□□□□□ -0.6
COL2A1-201ENST00000337299 CIDEAO60543 219 aa11.32□□□□□ -0.6
COL2A1-201ENST00000337299 VENTXO95231 258 aa11.32□□□□□ -0.6
COL2A1-201ENST00000337299 HLA-DQA1P01909 254 aa11.32□□□□□ -0.6
COL2A1-201ENST00000337299 TBC1D28Q2M2D7 210 aa11.32□□□□□ -0.6
COL2A1-201ENST00000337299 MOB1BQ7L9L4 216 aa11.32□□□□□ -0.6
COL2A1-201ENST00000337299 C10orf35Q96D05 121 aa11.32□□□□□ -0.6
COL2A1-201ENST00000337299 DERL1Q9BUN8 251 aa11.32□□□□□ -0.6
COL2A1-201ENST00000337299 YTHDF2Q9Y5A9 579 aaKnown RBP11.32□□□□□ -0.6
COL2A1-201ENST00000337299 ZNF407Q9C0G0 2248 aa11.32□□□□□ -0.6
COL2A1-201ENST00000337299 HAND1O96004 215 aa11.32□□□□□ -0.6
COL2A1-201ENST00000337299 DMWDQ09019 674 aa11.32□□□□□ -0.6
COL2A1-201ENST00000337299 OR1C1Q15619 314 aa11.32□□□□□ -0.6
COL2A1-201ENST00000337299 ACSF3Q4G176 576 aaPredicted RBP11.32□□□□□ -0.6
COL2A1-201ENST00000337299 ZNF841Q6ZN19 808 aa11.32□□□□□ -0.6
COL2A1-201ENST00000337299 ANKRD37Q7Z713 158 aa11.32□□□□□ -0.6
COL2A1-201ENST00000337299 OR4D5Q8NGN0 318 aa11.32□□□□□ -0.6
COL2A1-201ENST00000337299 C5orf63A6NC05 138 aa11.32□□□□□ -0.6
COL2A1-201ENST00000337299 CT45A10P0DMU9 189 aa11.32□□□□□ -0.6
COL2A1-201ENST00000337299 UCP1P25874 307 aa11.32□□□□□ -0.6
COL2A1-201ENST00000337299 SOX8P57073 446 aa11.32□□□□□ -0.6
COL2A1-201ENST00000337299 TM4SF20Q53R12 229 aa11.32□□□□□ -0.6
COL2A1-201ENST00000337299 RASL10BQ96S79 203 aa11.32□□□□□ -0.6
COL2A1-201ENST00000337299 WNT5BQ9H1J7 359 aa11.32□□□□□ -0.6
COL2A1-201ENST00000337299 TMEM242Q9NWH2 141 aa11.32□□□□□ -0.6
COL2A1-201ENST00000337299 IGHV1OR21-1A0A087WYE8 117 aa11.31□□□□□ -0.6
COL2A1-201ENST00000337299 M0QZ24 198 aa11.31□□□□□ -0.6
COL2A1-201ENST00000337299 LYL1P12980 280 aa11.31□□□□□ -0.6
COL2A1-201ENST00000337299 ORM2P19652 201 aa11.31□□□□□ -0.6
COL2A1-201ENST00000337299 GPR6P46095 362 aaPredicted RBP11.31□□□□□ -0.6
COL2A1-201ENST00000337299 ALKBH6Q3KRA9 238 aa11.31□□□□□ -0.6
COL2A1-201ENST00000337299 OR52L2PQ8NGH6 319 aa11.31□□□□□ -0.6
COL2A1-201ENST00000337299 SAP30LQ9HAJ7 183 aa11.31□□□□□ -0.6
COL2A1-201ENST00000337299 ZNF391Q9UJN7 358 aa11.31□□□□□ -0.6
COL2A1-201ENST00000337299 FZR1Q9UM11 496 aa11.31□□□□□ -0.6
COL2A1-201ENST00000337299 IGHV4-34P06331 123 aa11.31□□□□□ -0.6
COL2A1-201ENST00000337299 CDKN1AP38936 164 aa11.31□□□□□ -0.6
COL2A1-201ENST00000337299 ZNF658BQ4V348 819 aaPredicted RBP11.31□□□□□ -0.6
COL2A1-201ENST00000337299 GCSAMLQ5JQS6 135 aa11.31□□□□□ -0.6
COL2A1-201ENST00000337299 AMMECR1LQ6DCA0 310 aa11.31□□□□□ -0.6
COL2A1-201ENST00000337299 OR1L4Q8NGR5 311 aa11.31□□□□□ -0.6
COL2A1-201ENST00000337299 NEU1Q99519 415 aa11.31□□□□□ -0.6
COL2A1-201ENST00000337299 TMEM167BQ9NRX6 74 aa11.31□□□□□ -0.6
COL2A1-201ENST00000337299 PLA2G2EQ9NZK7 142 aa11.31□□□□□ -0.6
COL2A1-201ENST00000337299 F11RQ9Y624 299 aaKnown RBP11.31□□□□□ -0.6
COL2A1-201ENST00000337299 PPIAL4DF5H284 164 aa11.31□□□□□ -0.6
COL2A1-201ENST00000337299 PSG4Q00888 419 aa11.31□□□□□ -0.6
COL2A1-201ENST00000337299 EXT1Q16394 746 aa11.31□□□□□ -0.6
COL2A1-201ENST00000337299 FAM131CQ96AQ9 280 aa11.31□□□□□ -0.6
COL2A1-201ENST00000337299 GMPPAQ96IJ6 420 aaPredicted RBP11.31□□□□□ -0.6
COL2A1-201ENST00000337299 OR4C46A6NHA9 309 aa11.3□□□□□ -0.6
COL2A1-201ENST00000337299 PATE3B3GLJ2 98 aa11.3□□□□□ -0.6
COL2A1-201ENST00000337299 PLAUP00749 431 aa11.3□□□□□ -0.6
COL2A1-201ENST00000337299 DSCR4P56555 118 aaPredicted RBP11.3□□□□□ -0.6
COL2A1-201ENST00000337299 CENPWQ5EE01 88 aa11.3□□□□□ -0.6
COL2A1-201ENST00000337299 SLC23A3Q6PIS1 610 aa11.3□□□□□ -0.6
COL2A1-201ENST00000337299 OR10D3Q8NH80 312 aa11.3□□□□□ -0.6
COL2A1-201ENST00000337299 TM2D1Q9BX74 207 aa11.3□□□□□ -0.6
COL2A1-201ENST00000337299 OR2H1Q9GZK4 316 aa11.3□□□□□ -0.6
COL2A1-201ENST00000337299 INTS1Q8N201 2190 aaKnown RBP11.3□□□□□ -0.6
COL2A1-201ENST00000337299 TRPM7Q96QT4 1865 aa11.3□□□□□ -0.6
COL2A1-201ENST00000337299 LOC389332A0A1B0GUA5 103 aa11.3□□□□□ -0.6
COL2A1-201ENST00000337299 CYB561P49447 251 aa11.3□□□□□ -0.6
COL2A1-201ENST00000337299 ID3Q02535 119 aa11.3□□□□□ -0.6
COL2A1-201ENST00000337299 RABEPKQ7Z6M1 372 aa11.3□□□□□ -0.6
COL2A1-201ENST00000337299 KMT5CQ86Y97 462 aa11.3□□□□□ -0.6
COL2A1-201ENST00000337299 LYG1Q8N1E2 194 aa11.3□□□□□ -0.6
COL2A1-201ENST00000337299 LOXL4Q96JB6 756 aa11.3□□□□□ -0.6
COL2A1-201ENST00000337299 WDR90Q96KV7 1748 aa11.3□□□□□ -0.6
COL2A1-201ENST00000337299 SMPD2O60906 423 aa11.3□□□□□ -0.6
COL2A1-201ENST00000337299 ARL16Q0P5N6 197 aa11.3□□□□□ -0.6
COL2A1-201ENST00000337299 RPP25LQ8N5L8 163 aaKnown RBP11.3□□□□□ -0.6
COL2A1-201ENST00000337299 FLYWCH2Q96CP2 140 aaKnown RBP11.3□□□□□ -0.6
COL2A1-201ENST00000337299 LILRA5A6NI73 299 aa11.29□□□□□ -0.6
COL2A1-201ENST00000337299 ZNF324BQ6AW86 544 aaPredicted RBP11.29□□□□□ -0.6
COL2A1-201ENST00000337299 PRDM6Q9NQX0 595 aa11.29□□□□□ -0.6
COL2A1-201ENST00000337299 COL6A6A6NMZ7 2263 aa11.29□□□□□ -0.6
COL2A1-201ENST00000337299 RRHO14718 337 aa11.29□□□□□ -0.6
COL2A1-201ENST00000337299 OR2J3O76001 311 aa11.29□□□□□ -0.6
COL2A1-201ENST00000337299 HIST1H1EP10412 219 aaKnown RBP11.29□□□□□ -0.6
COL2A1-201ENST00000337299 UBE2V1Q13404 147 aa11.29□□□□□ -0.6
COL2A1-201ENST00000337299 TPTE2P1Q5T6R2 138 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms