RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 MSRB2Q9Y3D2 182 aa10.44□□□□□ -0.74
LIMK1-201ENST00000336180 HIVEP3Q5T1R4 2406 aa10.44□□□□□ -0.74
LIMK1-201ENST00000336180 ARHGAP32A7KAX9 2087 aa10.44□□□□□ -0.74
LIMK1-201ENST00000336180 BORCS7-ASMTA0A0B4J1R7 106 aa10.44□□□□□ -0.74
LIMK1-201ENST00000336180 C15orf65H3BRN8 121 aa10.44□□□□□ -0.74
LIMK1-201ENST00000336180 CCL3L1P16619 93 aa10.44□□□□□ -0.74
LIMK1-201ENST00000336180 GPR12P47775 334 aa10.44□□□□□ -0.74
LIMK1-201ENST00000336180 REG1BP48304 166 aa10.44□□□□□ -0.74
LIMK1-201ENST00000336180 ZNF645Q8N7E2 425 aa10.44□□□□□ -0.74
LIMK1-201ENST00000336180 SEBOXQ9HB31 216 aaPredicted RBP10.44□□□□□ -0.74
LIMK1-201ENST00000336180 PSENENQ9NZ42 101 aa10.44□□□□□ -0.74
LIMK1-201ENST00000336180 TRAV3A0A0B4J244 114 aa10.43□□□□□ -0.74
LIMK1-201ENST00000336180 SNAPC5O75971 98 aa10.43□□□□□ -0.74
LIMK1-201ENST00000336180 CD200P41217 278 aa10.43□□□□□ -0.74
LIMK1-201ENST00000336180 SRSF7Q16629 238 aaKnown RBP eCLIP10.43□□□□□ -0.74
LIMK1-201ENST00000336180 LYPD2Q6UXB3 125 aa10.43□□□□□ -0.74
LIMK1-201ENST00000336180 IGFBPL1Q8WX77 278 aa10.43□□□□□ -0.74
LIMK1-201ENST00000336180 EIF5A2Q9GZV4 153 aaKnown RBP10.43□□□□□ -0.74
LIMK1-201ENST00000336180 VSIRQ9H7M9 311 aa10.43□□□□□ -0.74
LIMK1-201ENST00000336180 RNF7Q9UBF6 113 aa10.43□□□□□ -0.74
LIMK1-201ENST00000336180 RNF115Q9Y4L5 304 aa10.43□□□□□ -0.74
LIMK1-201ENST00000336180 TNCP24821 2201 aa10.43□□□□□ -0.74
LIMK1-201ENST00000336180 CCL21O00585 134 aa10.43□□□□□ -0.74
LIMK1-201ENST00000336180 ZNF25P17030 456 aaPredicted RBP10.43□□□□□ -0.74
LIMK1-201ENST00000336180 ELLP55199 621 aaPredicted RBP10.43□□□□□ -0.74
LIMK1-201ENST00000336180 MRGPRGQ86SM5 289 aa10.43□□□□□ -0.74
LIMK1-201ENST00000336180 AKR1E2Q96JD6 320 aa10.43□□□□□ -0.74
LIMK1-201ENST00000336180 RARRES2Q99969 163 aa10.43□□□□□ -0.74
LIMK1-201ENST00000336180 LYRM2Q9NU23 88 aaPredicted RBP10.43□□□□□ -0.74
LIMK1-201ENST00000336180 LIN7CQ9NUP9 197 aaKnown RBP10.43□□□□□ -0.74
LIMK1-201ENST00000336180 TMEM218A2RU14 115 aa10.43□□□□□ -0.74
LIMK1-201ENST00000336180 ZG16O60844 167 aa10.43□□□□□ -0.74
LIMK1-201ENST00000336180 TSPAN15O95858 294 aa10.43□□□□□ -0.74
LIMK1-201ENST00000336180 NUTF2P61970 127 aaKnown RBP10.43□□□□□ -0.74
LIMK1-201ENST00000336180 PUSL1Q8N0Z8 303 aaKnown RBP10.43□□□□□ -0.74
LIMK1-201ENST00000336180 PIGMQ9H3S5 423 aa10.43□□□□□ -0.74
LIMK1-201ENST00000336180 RAI1Q7Z5J4 1906 aaPredicted RBP10.42□□□□□ -0.74
LIMK1-201ENST00000336180 ACACBO00763 2458 aa10.42□□□□□ -0.74
LIMK1-201ENST00000336180 IGLV3-9A0A075B6K5 115 aa10.42□□□□□ -0.74
LIMK1-201ENST00000336180 TAAR5O14804 337 aa10.42□□□□□ -0.74
LIMK1-201ENST00000336180 SYNGR2O43760 224 aa10.42□□□□□ -0.74
LIMK1-201ENST00000336180 NPBWR1P48145 328 aa10.42□□□□□ -0.74
LIMK1-201ENST00000336180 SULT1A2P50226 295 aa10.42□□□□□ -0.74
LIMK1-201ENST00000336180 HAPLN4Q86UW8 402 aa10.42□□□□□ -0.74
LIMK1-201ENST00000336180 LYG1Q8N1E2 194 aa10.42□□□□□ -0.74
LIMK1-201ENST00000336180 C2orf88Q9BSF0 95 aa10.42□□□□□ -0.74
LIMK1-201ENST00000336180 HINT2Q9BX68 163 aa10.42□□□□□ -0.74
LIMK1-201ENST00000336180 C11orf1Q9H5F2 150 aa10.42□□□□□ -0.74
LIMK1-201ENST00000336180 DYNLRB1Q9NP97 96 aa10.42□□□□□ -0.74
LIMK1-201ENST00000336180 CALYQ9NYX4 217 aa10.42□□□□□ -0.74
LIMK1-201ENST00000336180 OR13C7P0DN81 318 aa10.42□□□□□ -0.74
LIMK1-201ENST00000336180 FGF8P55075 233 aaPredicted RBP10.42□□□□□ -0.74
LIMK1-201ENST00000336180 PJVKQ0ZLH3 352 aa10.42□□□□□ -0.74
LIMK1-201ENST00000336180 HAGHQ16775 308 aa10.42□□□□□ -0.74
LIMK1-201ENST00000336180 C1orf122Q6ZSJ8 110 aa10.42□□□□□ -0.74
LIMK1-201ENST00000336180 UBAC2Q8NBM4 344 aa10.42□□□□□ -0.74
LIMK1-201ENST00000336180 RBKSQ9H477 322 aa10.42□□□□□ -0.74
LIMK1-201ENST00000336180 SIRT7Q9NRC8 400 aa10.42□□□□□ -0.74
LIMK1-201ENST00000336180 C19orf12Q9NSK7 152 aa10.42□□□□□ -0.74
LIMK1-201ENST00000336180 K7N7A8 449 aa10.41□□□□□ -0.74
LIMK1-201ENST00000336180 DAOP14920 347 aa10.41□□□□□ -0.74
LIMK1-201ENST00000336180 TMPRSS3P57727 454 aa10.41□□□□□ -0.74
LIMK1-201ENST00000336180 SAP30LQ9HAJ7 183 aa10.41□□□□□ -0.74
LIMK1-201ENST00000336180 GOLT1BQ9Y3E0 138 aa10.41□□□□□ -0.74
LIMK1-201ENST00000336180 MALRD1Q5VYJ5 2156 aa10.41□□□□□ -0.74
LIMK1-201ENST00000336180 PLXNB1O43157 2135 aa10.41□□□□□ -0.74
LIMK1-201ENST00000336180 SPG11Q96JI7 2443 aa10.41□□□□□ -0.74
LIMK1-201ENST00000336180 UBE2L5PA0A1B0GUS4 154 aa10.41□□□□□ -0.74
LIMK1-201ENST00000336180 E7EQL1 145 aa10.41□□□□□ -0.74
LIMK1-201ENST00000336180 SCAF4O95104 1147 aaKnown RBP10.41□□□□□ -0.74
LIMK1-201ENST00000336180 IRF2P14316 349 aa10.41□□□□□ -0.74
LIMK1-201ENST00000336180 FABP9Q0Z7S8 132 aa10.41□□□□□ -0.74
LIMK1-201ENST00000336180 MORN2Q502X0 79 aa10.41□□□□□ -0.74
LIMK1-201ENST00000336180 GAFA1Q96PS6 74 aa10.41□□□□□ -0.74
LIMK1-201ENST00000336180 AGMATQ9BSE5 352 aa10.41□□□□□ -0.74
LIMK1-201ENST00000336180 UQCC1Q9NVA1 299 aa10.41□□□□□ -0.74
LIMK1-201ENST00000336180 CACNA1BQ00975 2339 aa10.41□□□□□ -0.74
LIMK1-201ENST00000336180 UTP20O75691 2785 aaKnown RBP10.41□□□□□ -0.74
LIMK1-201ENST00000336180 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.41□□□□□ -0.74
LIMK1-201ENST00000336180 RNASEK-C17orf49H0YIS7 233 aa10.41□□□□□ -0.74
LIMK1-201ENST00000336180 MGST3O14880 152 aa10.41□□□□□ -0.74
LIMK1-201ENST00000336180 FCN3O75636 299 aa10.41□□□□□ -0.74
LIMK1-201ENST00000336180 NPSP0C0P6 89 aa10.41□□□□□ -0.74
LIMK1-201ENST00000336180 SFTA3P0C7M3 94 aa10.41□□□□□ -0.74
LIMK1-201ENST00000336180 OR9G9P0C7N8 305 aa10.41□□□□□ -0.74
LIMK1-201ENST00000336180 GPR157Q5UAW9 335 aa10.41□□□□□ -0.74
LIMK1-201ENST00000336180 S100A7AQ86SG5 101 aa10.41□□□□□ -0.74
LIMK1-201ENST00000336180 ZNF561Q8N587 486 aa10.41□□□□□ -0.74
LIMK1-201ENST00000336180 SMIM8Q96KF7 97 aa10.41□□□□□ -0.74
LIMK1-201ENST00000336180 SNX22Q96L94 193 aa10.41□□□□□ -0.74
LIMK1-201ENST00000336180 GGACTQ9BVM4 153 aa10.41□□□□□ -0.74
LIMK1-201ENST00000336180 MMP26Q9NRE1 261 aa10.41□□□□□ -0.74
LIMK1-201ENST00000336180 MED9Q9NWA0 146 aa10.41□□□□□ -0.74
LIMK1-201ENST00000336180 CACFD1Q9UGQ2 172 aa10.41□□□□□ -0.74
LIMK1-201ENST00000336180 CLEC18AA5D8T8 446 aa10.4□□□□□ -0.74
LIMK1-201ENST00000336180 NCMAPQ5T1S8 102 aa10.4□□□□□ -0.74
LIMK1-201ENST00000336180 AVPI1Q5T686 147 aa10.4□□□□□ -0.74
LIMK1-201ENST00000336180 TCF23Q7RTU1 214 aa10.4□□□□□ -0.74
LIMK1-201ENST00000336180 CLEC18CQ8NCF0 446 aa10.4□□□□□ -0.74
LIMK1-201ENST00000336180 Q8TCH9 128 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms