RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 RTP5Q14D33 572 aa13.95□□□□□ -0.18
CDC42EP4-201ENST00000335793 TBC1D28Q2M2D7 210 aa13.95□□□□□ -0.18
CDC42EP4-201ENST00000335793 LDLRAD2Q5SZI1 272 aa13.95□□□□□ -0.18
CDC42EP4-201ENST00000335793 DPPA3Q6W0C5 159 aa13.95□□□□□ -0.18
CDC42EP4-201ENST00000335793 CLN8Q9UBY8 286 aa13.95□□□□□ -0.18
CDC42EP4-201ENST00000335793 IGKV3D-15A0A087WSY6 115 aa13.95□□□□□ -0.18
CDC42EP4-201ENST00000335793 NKX6-3A6NJ46 265 aa13.95□□□□□ -0.18
CDC42EP4-201ENST00000335793 SH2D1BO14796 132 aa13.95□□□□□ -0.18
CDC42EP4-201ENST00000335793 IGKV1-39P01597 117 aa13.95□□□□□ -0.18
CDC42EP4-201ENST00000335793 IGKV1-5P01602 117 aa13.95□□□□□ -0.18
CDC42EP4-201ENST00000335793 IGKV1D-39P04432 117 aa13.95□□□□□ -0.18
CDC42EP4-201ENST00000335793 CD46P15529 392 aa13.95□□□□□ -0.18
CDC42EP4-201ENST00000335793 MEOX1P50221 254 aa13.95□□□□□ -0.18
CDC42EP4-201ENST00000335793 ARG2P78540 354 aa13.95□□□□□ -0.18
CDC42EP4-201ENST00000335793 HOXA4Q00056 320 aaPredicted RBP13.95□□□□□ -0.18
CDC42EP4-201ENST00000335793 ZNF525Q8N782 197 aa13.95□□□□□ -0.18
CDC42EP4-201ENST00000335793 TPRX1Q8N7U7 411 aa13.95□□□□□ -0.18
CDC42EP4-201ENST00000335793 OR2D2Q9H210 308 aa13.95□□□□□ -0.18
CDC42EP4-201ENST00000335793 LNP1A1A4G5 178 aa13.94□□□□□ -0.18
CDC42EP4-201ENST00000335793 NRN1LQ496H8 165 aa13.94□□□□□ -0.18
CDC42EP4-201ENST00000335793 DRAM1Q8N682 238 aa13.94□□□□□ -0.18
CDC42EP4-201ENST00000335793 SCCPDHQ8NBX0 429 aa13.94□□□□□ -0.18
CDC42EP4-201ENST00000335793 OR4F5Q8NH21 305 aa13.94□□□□□ -0.18
CDC42EP4-201ENST00000335793 OR4F4Q96R69 305 aa13.94□□□□□ -0.18
CDC42EP4-201ENST00000335793 A0A087WWC5 75 aa13.94□□□□□ -0.18
CDC42EP4-201ENST00000335793 NUPR1O60356 82 aa13.94□□□□□ -0.18
CDC42EP4-201ENST00000335793 CIDEAO60543 219 aa13.94□□□□□ -0.18
CDC42EP4-201ENST00000335793 LYZL6O75951 148 aa13.94□□□□□ -0.18
CDC42EP4-201ENST00000335793 CELA3BP08861 270 aa13.94□□□□□ -0.18
CDC42EP4-201ENST00000335793 HINT1P49773 126 aaPredicted RBP13.94□□□□□ -0.18
CDC42EP4-201ENST00000335793 FAM53AQ6NSI3 398 aaPredicted RBP13.94□□□□□ -0.18
CDC42EP4-201ENST00000335793 UBALD2Q8IYN6 164 aa13.94□□□□□ -0.18
CDC42EP4-201ENST00000335793 OR5B12Q96R08 314 aa13.94□□□□□ -0.18
CDC42EP4-201ENST00000335793 VAX2Q9UIW0 290 aa13.94□□□□□ -0.18
CDC42EP4-201ENST00000335793 POLDIP2Q9Y2S7 368 aa13.94□□□□□ -0.18
CDC42EP4-201ENST00000335793 GVINP1Q7Z2Y8 2422 aa13.94□□□□□ -0.18
CDC42EP4-201ENST00000335793 IGHV3-43A0A0B4J1X8 118 aa13.93□□□□□ -0.18
CDC42EP4-201ENST00000335793 LRP5LA4QPB2 252 aa13.93□□□□□ -0.18
CDC42EP4-201ENST00000335793 DEFB108AA8MXU0 73 aa13.93□□□□□ -0.18
CDC42EP4-201ENST00000335793 IGHV3-43DP0DP04 118 aa13.93□□□□□ -0.18
CDC42EP4-201ENST00000335793 ALKBH6Q3KRA9 238 aa13.93□□□□□ -0.18
CDC42EP4-201ENST00000335793 ZNF826PQ6ZT77 177 aa13.93□□□□□ -0.18
CDC42EP4-201ENST00000335793 WFDC8Q8IUA0 241 aa13.93□□□□□ -0.18
CDC42EP4-201ENST00000335793 FAM234AQ9H0X4 552 aa13.93□□□□□ -0.18
CDC42EP4-201ENST00000335793 PATZ1Q9HBE1 687 aaKnown RBP13.93□□□□□ -0.18
CDC42EP4-201ENST00000335793 TFF1P04155 84 aa13.93□□□□□ -0.18
CDC42EP4-201ENST00000335793 OR10J1P30954 320 aa13.93□□□□□ -0.18
CDC42EP4-201ENST00000335793 CDC34P49427 236 aaPredicted RBP13.93□□□□□ -0.18
CDC42EP4-201ENST00000335793 CNEP1R1Q8N9A8 125 aa13.93□□□□□ -0.18
CDC42EP4-201ENST00000335793 ARRDC1-AS1Q9H2J1 176 aa13.93□□□□□ -0.18
CDC42EP4-201ENST00000335793 FZR1Q9UM11 496 aa13.93□□□□□ -0.18
CDC42EP4-201ENST00000335793 GALR2O43603 387 aaPredicted RBP13.93□□□□□ -0.18
CDC42EP4-201ENST00000335793 PSMB3P49720 205 aa13.93□□□□□ -0.18
CDC42EP4-201ENST00000335793 AESQ08117 197 aa13.93□□□□□ -0.18
CDC42EP4-201ENST00000335793 RNPS1Q15287 305 aaKnown RBP13.93□□□□□ -0.18
CDC42EP4-201ENST00000335793 OR1L1Q8NH94 360 aa13.93□□□□□ -0.18
CDC42EP4-201ENST00000335793 TAF15Q92804 592 aaKnown RBP eCLIP13.93□□□□□ -0.18
CDC42EP4-201ENST00000335793 MIEN1Q9BRT3 115 aa13.93□□□□□ -0.18
CDC42EP4-201ENST00000335793 OR51I2Q9H344 312 aa13.93□□□□□ -0.18
CDC42EP4-201ENST00000335793 MSMO1Q15800 293 aa13.92□□□□□ -0.18
CDC42EP4-201ENST00000335793 SRSF7Q16629 238 aaKnown RBP eCLIP13.92□□□□□ -0.18
CDC42EP4-201ENST00000335793 FAM90A2PQ658T7 463 aa13.92□□□□□ -0.18
CDC42EP4-201ENST00000335793 MRGPRGQ86SM5 289 aa13.92□□□□□ -0.18
CDC42EP4-201ENST00000335793 GALMQ96C23 342 aa13.92□□□□□ -0.18
CDC42EP4-201ENST00000335793 CISD1Q9NZ45 108 aaKnown RBP13.92□□□□□ -0.18
CDC42EP4-201ENST00000335793 CADP27708 2225 aa13.92□□□□□ -0.18
CDC42EP4-201ENST00000335793 TECTAO75443 2155 aa13.92□□□□□ -0.18
CDC42EP4-201ENST00000335793 KLRC4-KLRK1H3BQV0 150 aa13.92□□□□□ -0.18
CDC42EP4-201ENST00000335793 RAMP3O60896 148 aa13.92□□□□□ -0.18
CDC42EP4-201ENST00000335793 DEFA4P12838 97 aa13.92□□□□□ -0.18
CDC42EP4-201ENST00000335793 GZMHP20718 246 aa13.92□□□□□ -0.18
CDC42EP4-201ENST00000335793 PPP1CBP62140 327 aa13.92□□□□□ -0.18
CDC42EP4-201ENST00000335793 PNRC1Q12796 327 aaPredicted RBP13.92□□□□□ -0.18
CDC42EP4-201ENST00000335793 ZNF726P1Q15940 193 aa13.92□□□□□ -0.18
CDC42EP4-201ENST00000335793 OR52L2PQ8NGH6 319 aa13.92□□□□□ -0.18
CDC42EP4-201ENST00000335793 MRGPRDQ8TDS7 321 aa13.92□□□□□ -0.18
CDC42EP4-201ENST00000335793 WDR61Q9GZS3 305 aaKnown RBP13.92□□□□□ -0.18
CDC42EP4-201ENST00000335793 GRIFINA4D1Z8 144 aa13.91□□□□□ -0.18
CDC42EP4-201ENST00000335793 B4DEV8 164 aa13.91□□□□□ -0.18
CDC42EP4-201ENST00000335793 TMEM41BQ5BJD5 291 aa13.91□□□□□ -0.18
CDC42EP4-201ENST00000335793 LINC00596Q86U02 117 aa13.91□□□□□ -0.18
CDC42EP4-201ENST00000335793 PINX1Q96BK5 328 aaKnown RBP13.91□□□□□ -0.18
CDC42EP4-201ENST00000335793 TXN2Q99757 166 aa13.91□□□□□ -0.18
CDC42EP4-201ENST00000335793 VAMP8Q9BV40 100 aa13.91□□□□□ -0.18
CDC42EP4-201ENST00000335793 CACNA1GO43497 2377 aa13.91□□□□□ -0.18
CDC42EP4-201ENST00000335793 NBEAQ8NFP9 2946 aa13.91□□□□□ -0.18
CDC42EP4-201ENST00000335793 KIAA1549Q9HCM3 1950 aa13.91□□□□□ -0.18
CDC42EP4-201ENST00000335793 RNF212BA8MTL3 300 aa13.91□□□□□ -0.18
CDC42EP4-201ENST00000335793 H7BYZ3 331 aa13.91□□□□□ -0.18
CDC42EP4-201ENST00000335793 IGHV3-13P01766 116 aa13.91□□□□□ -0.18
CDC42EP4-201ENST00000335793 IGHV3-7P01780 117 aa13.91□□□□□ -0.18
CDC42EP4-201ENST00000335793 SERF2P84101 59 aa13.91□□□□□ -0.18
CDC42EP4-201ENST00000335793 VAMP3Q15836 100 aa13.91□□□□□ -0.18
CDC42EP4-201ENST00000335793 TMEM241Q24JQ0 296 aa13.91□□□□□ -0.18
CDC42EP4-201ENST00000335793 LRRC75BQ2VPJ9 315 aa13.91□□□□□ -0.18
CDC42EP4-201ENST00000335793 ZNF585BQ52M93 769 aa13.91□□□□□ -0.18
CDC42EP4-201ENST00000335793 OR10P1Q8NGE3 313 aa13.91□□□□□ -0.18
CDC42EP4-201ENST00000335793 SLC25A40Q8TBP6 338 aa13.91□□□□□ -0.18
CDC42EP4-201ENST00000335793 LSM10Q969L4 123 aaKnown RBP13.91□□□□□ -0.18
CDC42EP4-201ENST00000335793 AURKAIP1Q9NWT8 199 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms