RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 CDS2O95674 445 aa17.3■□□□□ 0.36
TPM1-204ENST00000334895 ANXA3P12429 323 aa17.3■□□□□ 0.36
TPM1-204ENST00000334895 FBLN7Q53RD9 439 aa17.3■□□□□ 0.36
TPM1-204ENST00000334895 CCDC144NLQ6NUI1 221 aa17.3■□□□□ 0.36
TPM1-204ENST00000334895 C11orf88Q6PI97 169 aa17.3■□□□□ 0.36
TPM1-204ENST00000334895 LIAT1Q6ZQX7 453 aa17.3■□□□□ 0.36
TPM1-204ENST00000334895 TCTEX1D1Q8N7M0 179 aa17.3■□□□□ 0.36
TPM1-204ENST00000334895 OR51J1Q9H342 316 aa17.3■□□□□ 0.36
TPM1-204ENST00000334895 FAM212BQ9NTI7 297 aaPredicted RBP17.3■□□□□ 0.36
TPM1-204ENST00000334895 MXRA5Q9NR99 2828 aa17.3■□□□□ 0.36
TPM1-204ENST00000334895 RBFOX2O43251 390 aaKnown RBP eCLIP17.29■□□□□ 0.36
TPM1-204ENST00000334895 S1PR2O95136 353 aa17.29■□□□□ 0.36
TPM1-204ENST00000334895 LPAR6P43657 344 aa17.29■□□□□ 0.36
TPM1-204ENST00000334895 C9orf139Q6ZV77 190 aa17.29■□□□□ 0.36
TPM1-204ENST00000334895 C22orf15Q8WYQ4 148 aa17.29■□□□□ 0.36
TPM1-204ENST00000334895 TMEM56Q96MV1 263 aa17.29■□□□□ 0.36
TPM1-204ENST00000334895 TMEM56-RWDD3S4R434 201 aa17.29■□□□□ 0.36
TPM1-204ENST00000334895 FN1P02751 2386 aaKnown RBP17.29■□□□□ 0.36
TPM1-204ENST00000334895 hCG_2014768A0A024R1R8 64 aa17.29■□□□□ 0.36
TPM1-204ENST00000334895 APOA2P02652 100 aa17.29■□□□□ 0.36
TPM1-204ENST00000334895 KIR2DS2P43631 304 aa17.29■□□□□ 0.36
TPM1-204ENST00000334895 SELENOHQ8IZQ5 122 aaKnown RBP17.29■□□□□ 0.36
TPM1-204ENST00000334895 C12orf45Q8N5I9 185 aaPredicted RBP17.29■□□□□ 0.36
TPM1-204ENST00000334895 MEGF9Q9H1U4 602 aa17.29■□□□□ 0.36
TPM1-204ENST00000334895 WASHC3Q9Y3C0 194 aa17.29■□□□□ 0.36
TPM1-204ENST00000334895 NAV3Q8IVL0 2385 aa17.28■□□□□ 0.36
TPM1-204ENST00000334895 A0A0B4J2A0 478 aa17.28■□□□□ 0.36
TPM1-204ENST00000334895 MDFIC2A0A1B0GVS7 189 aa17.28■□□□□ 0.36
TPM1-204ENST00000334895 DBX1A6NMT0 343 aa17.28■□□□□ 0.36
TPM1-204ENST00000334895 VENTXO95231 258 aa17.28■□□□□ 0.36
TPM1-204ENST00000334895 CRYZL1O95825 349 aa17.28■□□□□ 0.36
TPM1-204ENST00000334895 SERPINE2P07093 398 aa17.28■□□□□ 0.36
TPM1-204ENST00000334895 CD24P25063 80 aa17.28■□□□□ 0.36
TPM1-204ENST00000334895 TAGLNQ01995 201 aaKnown RBP17.28■□□□□ 0.36
TPM1-204ENST00000334895 RTL8BQ17RB0 113 aa17.28■□□□□ 0.36
TPM1-204ENST00000334895 PDPNQ86YL7 162 aa17.28■□□□□ 0.36
TPM1-204ENST00000334895 LRTM2Q8N967 370 aa17.28■□□□□ 0.36
TPM1-204ENST00000334895 OR4S2Q8NH73 311 aa17.28■□□□□ 0.36
TPM1-204ENST00000334895 CD300LFQ8TDQ1 290 aa17.28■□□□□ 0.36
TPM1-204ENST00000334895 RITA1Q96K30 269 aa17.28■□□□□ 0.36
TPM1-204ENST00000334895 PHB2Q99623 299 aa17.28■□□□□ 0.36
TPM1-204ENST00000334895 MS4A7Q9GZW8 240 aaPredicted RBP17.28■□□□□ 0.36
TPM1-204ENST00000334895 TMEM160Q9NX00 188 aa17.28■□□□□ 0.36
TPM1-204ENST00000334895 SHPKQ9UHJ6 478 aa17.28■□□□□ 0.36
TPM1-204ENST00000334895 ZFHX3Q15911 3703 aa17.27■□□□□ 0.36
TPM1-204ENST00000334895 FAM90A9PA6NNJ1 464 aa17.27■□□□□ 0.36
TPM1-204ENST00000334895 H7C2Y5 167 aa17.27■□□□□ 0.36
TPM1-204ENST00000334895 CD1BP29016 333 aa17.27■□□□□ 0.36
TPM1-204ENST00000334895 MC5RP33032 325 aa17.27■□□□□ 0.36
TPM1-204ENST00000334895 RAB13P51153 203 aa17.27■□□□□ 0.36
TPM1-204ENST00000334895 C2orf68Q2NKX9 166 aa17.27■□□□□ 0.36
TPM1-204ENST00000334895 TMEM268Q5VZI3 342 aa17.27■□□□□ 0.36
TPM1-204ENST00000334895 COQ8AQ8NI60 647 aa17.27■□□□□ 0.36
TPM1-204ENST00000334895 PLEKHA2Q9HB19 425 aa17.27■□□□□ 0.36
TPM1-204ENST00000334895 FAM96BQ9Y3D0 163 aa17.27■□□□□ 0.36
TPM1-204ENST00000334895 HPRT1P00492 218 aa17.26■□□□□ 0.35
TPM1-204ENST00000334895 RRASP10301 218 aa17.26■□□□□ 0.35
TPM1-204ENST00000334895 DEFB112Q30KQ8 113 aa17.26■□□□□ 0.35
TPM1-204ENST00000334895 DHRS7BQ6IAN0 325 aaPredicted RBP17.26■□□□□ 0.35
TPM1-204ENST00000334895 CADM3Q8N126 398 aa17.26■□□□□ 0.35
TPM1-204ENST00000334895 LGI3Q8N145 548 aa17.26■□□□□ 0.35
TPM1-204ENST00000334895 SLC35G3Q8N808 338 aa17.26■□□□□ 0.35
TPM1-204ENST00000334895 SRRM4A7MD48 611 aaKnown RBP17.25■□□□□ 0.35
TPM1-204ENST00000334895 VGLL3A8MV65 326 aa17.25■□□□□ 0.35
TPM1-204ENST00000334895 INAFM1C9JVW0 142 aa17.25■□□□□ 0.35
TPM1-204ENST00000334895 SNRNP70P08621 437 aaKnown RBP17.25■□□□□ 0.35
TPM1-204ENST00000334895 FBP1P09467 338 aa17.25■□□□□ 0.35
TPM1-204ENST00000334895 RPA2P15927 270 aa17.25■□□□□ 0.35
TPM1-204ENST00000334895 SRPXP78539 464 aa17.25■□□□□ 0.35
TPM1-204ENST00000334895 TMEM177Q53S58 311 aa17.25■□□□□ 0.35
TPM1-204ENST00000334895 LYZL2Q7Z4W2 148 aa17.25■□□□□ 0.35
TPM1-204ENST00000334895 UXS1Q8NBZ7 420 aa17.25■□□□□ 0.35
TPM1-204ENST00000334895 PIFOQ8TCI5 191 aa17.25■□□□□ 0.35
TPM1-204ENST00000334895 RBPMSQ93062 196 aaKnown RBP17.25■□□□□ 0.35
TPM1-204ENST00000334895 IL22RA2Q969J5 263 aa17.25■□□□□ 0.35
TPM1-204ENST00000334895 SSNA1O43805 119 aa17.25■□□□□ 0.35
TPM1-204ENST00000334895 ADAP1O75689 374 aa17.25■□□□□ 0.35
TPM1-204ENST00000334895 IGKV1D-33P01593 117 aa17.25■□□□□ 0.35
TPM1-204ENST00000334895 IGKV1-33P01594 117 aa17.25■□□□□ 0.35
TPM1-204ENST00000334895 IGKV1-5P01602 117 aa17.25■□□□□ 0.35
TPM1-204ENST00000334895 HNF1AP20823 631 aa17.25■□□□□ 0.35
TPM1-204ENST00000334895 ZNF695Q8IW36 515 aa17.25■□□□□ 0.35
TPM1-204ENST00000334895 FLYWCH2Q96CP2 140 aaKnown RBP17.25■□□□□ 0.35
TPM1-204ENST00000334895 SEC22AQ96IW7 307 aa17.25■□□□□ 0.35
TPM1-204ENST00000334895 ZNF48Q96MX3 618 aaPredicted RBP17.25■□□□□ 0.35
TPM1-204ENST00000334895 DYNLT3P51808 116 aa17.24■□□□□ 0.35
TPM1-204ENST00000334895 ARHGDIBP52566 201 aa17.24■□□□□ 0.35
TPM1-204ENST00000334895 EBI3Q14213 229 aa17.24■□□□□ 0.35
TPM1-204ENST00000334895 TUSC1Q2TAM9 212 aa17.24■□□□□ 0.35
TPM1-204ENST00000334895 VKORC1L1Q8N0U8 176 aa17.24■□□□□ 0.35
TPM1-204ENST00000334895 OR4C13Q8NGP0 309 aa17.24■□□□□ 0.35
TPM1-204ENST00000334895 COMMD9Q9P000 198 aa17.24■□□□□ 0.35
TPM1-204ENST00000334895 A0A0G2JRQ6 117 aa17.23■□□□□ 0.35
TPM1-204ENST00000334895 IGLV2-23P01705 113 aa17.23■□□□□ 0.35
TPM1-204ENST00000334895 HOXB5P09067 269 aa17.23■□□□□ 0.35
TPM1-204ENST00000334895 G6PCP35575 357 aa17.23■□□□□ 0.35
TPM1-204ENST00000334895 SRP14P37108 136 aaKnown RBP17.23■□□□□ 0.35
TPM1-204ENST00000334895 RRAS2P62070 204 aaPredicted RBP17.23■□□□□ 0.35
TPM1-204ENST00000334895 FCN2Q15485 313 aa17.23■□□□□ 0.35
TPM1-204ENST00000334895 OSR1Q8TAX0 266 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms