RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 SLC25A22Q9H936 323 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 ATAD5Q96QE3 1844 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 A0A0J9YY10 115 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 A0A1B0GX78 115 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 NMBP08949 121 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 TMEM240Q5SV17 173 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 VSIG2Q96IQ7 327 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 SLIRPQ9GZT3 109 aaKnown RBP5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 SLC25A19Q9HC21 320 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 EMCNQ9ULC0 261 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 UNC119Q13432 240 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 ANXA2RQ3ZCQ2 193 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 CIARTQ8N365 385 aaPredicted RBP5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 TOPAZ1Q8N9V7 1692 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 TRAV27A0A087WT01 109 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 AQP6Q13520 282 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 TBR1Q16650 682 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 FAM219BQ5XKK7 198 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 INO80CQ6PI98 192 aaPredicted RBP5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 ABHD12Q8N2K0 398 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 C10orf111Q8N326 155 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 TRAV26-1A0A087WT03 109 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 LTBRP36941 435 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 NEGR1Q7Z3B1 354 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 ZNRF1Q8ND25 227 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 IGKV6D-41A0A0C4DH26 115 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 ZCWPW2A0A1B0GU75 182 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 FABP5P3A8MUU1 101 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 ZNF593O00488 134 aaPredicted RBP5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 EML2O95834 649 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 ANOS1P23352 680 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 CST5P28325 142 aaPredicted RBP5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 CST6Q15828 149 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 SYS1Q8N2H4 156 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 CHST8Q9H2A9 424 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 TMED7-TICAM2A0A0A6YYA0 188 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 NXPH3O95157 252 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 LYL1P12980 280 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 BLVRBP30043 206 aaPredicted RBP5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 ID1P41134 155 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 FXYD7P58549 80 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 RPS15AP62244 130 aaKnown RBP5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 MISP3Q96FF7 219 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 A6NNC1 897 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 ACOT8O14734 319 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 AGFG2O95081 481 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 MRPL23Q16540 153 aaKnown RBP5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 ZNF441Q8N8Z8 693 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 TMEM170AQ8WVE7 144 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 FOXB1Q99853 325 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 OCIAD1Q9NX40 245 aa5.28□□□□□ -1.56
CDC42BPA-201ENST00000334218 M0QZ24 198 aa5.27□□□□□ -1.57
CDC42BPA-201ENST00000334218 SRSF10O75494 262 aaKnown RBP5.27□□□□□ -1.57
CDC42BPA-201ENST00000334218 WNT11O96014 354 aa5.27□□□□□ -1.57
CDC42BPA-201ENST00000334218 TSPOP30536 169 aa5.27□□□□□ -1.57
CDC42BPA-201ENST00000334218 STC1P52823 247 aa5.27□□□□□ -1.57
CDC42BPA-201ENST00000334218 IL11RAQ14626 422 aa5.27□□□□□ -1.57
CDC42BPA-201ENST00000334218 TMEM86BQ8N661 226 aa5.27□□□□□ -1.57
CDC42BPA-201ENST00000334218 IFI27L2Q9H2X8 130 aa5.27□□□□□ -1.57
CDC42BPA-201ENST00000334218 FOXI3A8MTJ6 420 aaPredicted RBP5.27□□□□□ -1.57
CDC42BPA-201ENST00000334218 K7EP34 96 aa5.27□□□□□ -1.57
CDC42BPA-201ENST00000334218 RNF225M0QZC1 329 aaPredicted RBP5.27□□□□□ -1.57
CDC42BPA-201ENST00000334218 TIMP1P01033 207 aa5.27□□□□□ -1.57
CDC42BPA-201ENST00000334218 IGHV2-70P01814 119 aa5.27□□□□□ -1.57
CDC42BPA-201ENST00000334218 RND2P52198 227 aa5.27□□□□□ -1.57
CDC42BPA-201ENST00000334218 IP6K3Q96PC2 410 aa5.27□□□□□ -1.57
CDC42BPA-201ENST00000334218 CMC2Q9NRP2 79 aa5.27□□□□□ -1.57
CDC42BPA-201ENST00000334218 RGPD8O14715 1765 aaPredicted RBP5.27□□□□□ -1.57
CDC42BPA-201ENST00000334218 NPPBP16860 134 aa5.27□□□□□ -1.57
CDC42BPA-201ENST00000334218 KCNK17Q96T54 332 aa5.27□□□□□ -1.57
CDC42BPA-201ENST00000334218 COA4Q9NYJ1 87 aa5.27□□□□□ -1.57
CDC42BPA-201ENST00000334218 TRBV20OR9-2A0A075B6H5 130 aa5.27□□□□□ -1.57
CDC42BPA-201ENST00000334218 CRPP02741 224 aa5.27□□□□□ -1.57
CDC42BPA-201ENST00000334218 ZNF250P15622 560 aa5.27□□□□□ -1.57
CDC42BPA-201ENST00000334218 TIAL1Q01085 375 aaKnown RBP eCLIP5.27□□□□□ -1.57
CDC42BPA-201ENST00000334218 COL10A1Q03692 680 aa5.27□□□□□ -1.57
CDC42BPA-201ENST00000334218 PLCE1Q9P212 2302 aa5.27□□□□□ -1.57
CDC42BPA-201ENST00000334218 NDUFB1O75438 58 aa5.27□□□□□ -1.57
CDC42BPA-201ENST00000334218 EBLN2Q6P2I7 272 aa5.27□□□□□ -1.57
CDC42BPA-201ENST00000334218 NHLRC1Q6VVB1 395 aa5.27□□□□□ -1.57
CDC42BPA-201ENST00000334218 RFLNAQ6ZTI6 216 aa5.27□□□□□ -1.57
CDC42BPA-201ENST00000334218 M0R381 172 aa5.27□□□□□ -1.57
CDC42BPA-201ENST00000334218 TCL1BO95988 128 aa5.27□□□□□ -1.57
CDC42BPA-201ENST00000334218 CEACAM1P13688 526 aa5.27□□□□□ -1.57
CDC42BPA-201ENST00000334218 MRPS24Q96EL2 167 aaKnown RBP5.27□□□□□ -1.57
CDC42BPA-201ENST00000334218 PLXNB3Q9ULL4 1909 aa5.27□□□□□ -1.57
CDC42BPA-201ENST00000334218 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.27□□□□□ -1.57
CDC42BPA-201ENST00000334218 C9orf170A2RU37 121 aa5.27□□□□□ -1.57
CDC42BPA-201ENST00000334218 NUP43Q8NFH3 380 aa5.27□□□□□ -1.57
CDC42BPA-201ENST00000334218 CYB5D2Q8WUJ1 264 aa5.27□□□□□ -1.57
CDC42BPA-201ENST00000334218 RBM24Q9BX46 236 aaKnown RBP5.27□□□□□ -1.57
CDC42BPA-201ENST00000334218 NPCDR1Q9BY65 106 aa5.27□□□□□ -1.57
CDC42BPA-201ENST00000334218 PHPT1Q9NRX4 125 aaPredicted RBP5.27□□□□□ -1.57
CDC42BPA-201ENST00000334218 A0A0U1RQF3 1178 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 RAC3P60763 192 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 IBA57Q5T440 356 aaKnown RBP5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 SSMEM1Q8WWF3 244 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 TRMT61AQ96FX7 289 aaKnown RBP5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 PRNDQ9UKY0 176 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 SIVA1O15304 175 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms