RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 ZNF841Q6ZN19 808 aa13.89□□□□□ -0.19
DDX41-201ENST00000330503 STX12Q86Y82 276 aa13.89□□□□□ -0.19
DDX41-201ENST00000330503 RBMXL1Q96E39 390 aaKnown RBP13.89□□□□□ -0.19
DDX41-201ENST00000330503 SESN1Q9Y6P5 492 aa13.89□□□□□ -0.19
DDX41-201ENST00000330503 HRNRQ86YZ3 2850 aaPredicted RBP13.88□□□□□ -0.19
DDX41-201ENST00000330503 SHOXO15266 292 aa13.88□□□□□ -0.19
DDX41-201ENST00000330503 METTL15P1P0C7V9 234 aa13.88□□□□□ -0.19
DDX41-201ENST00000330503 DANCRP0C864 163 aa13.88□□□□□ -0.19
DDX41-201ENST00000330503 AGAP20933 346 aa13.88□□□□□ -0.19
DDX41-201ENST00000330503 ATP6V0CP27449 155 aa13.88□□□□□ -0.19
DDX41-201ENST00000330503 VKORC1L1Q8N0U8 176 aa13.88□□□□□ -0.19
DDX41-201ENST00000330503 ATP5SQ99766 215 aa13.88□□□□□ -0.19
DDX41-201ENST00000330503 QTRT1Q9BXR0 403 aaKnown RBP13.88□□□□□ -0.19
DDX41-201ENST00000330503 LRBAP50851 2863 aa13.88□□□□□ -0.19
DDX41-201ENST00000330503 RAB19A4D1S5 217 aa13.88□□□□□ -0.19
DDX41-201ENST00000330503 LY6HO94772 140 aa13.88□□□□□ -0.19
DDX41-201ENST00000330503 CT45A6P0DMU7 189 aa13.88□□□□□ -0.19
DDX41-201ENST00000330503 CT45A5P0DMU8 189 aa13.88□□□□□ -0.19
DDX41-201ENST00000330503 CT45A7P0DMV0 189 aa13.88□□□□□ -0.19
DDX41-201ENST00000330503 ZP3P21754 424 aa13.88□□□□□ -0.19
DDX41-201ENST00000330503 AARDQ4LEZ3 155 aa13.88□□□□□ -0.19
DDX41-201ENST00000330503 TMEM155Q4W5P6 130 aa13.88□□□□□ -0.19
DDX41-201ENST00000330503 SPANXN5Q5MJ07 72 aa13.88□□□□□ -0.19
DDX41-201ENST00000330503 SSX9Q7RTT3 188 aa13.88□□□□□ -0.19
DDX41-201ENST00000330503 STPG2Q8N412 459 aa13.88□□□□□ -0.19
DDX41-201ENST00000330503 C11orf42Q8N5U0 333 aa13.88□□□□□ -0.19
DDX41-201ENST00000330503 RAB1BQ9H0U4 201 aa13.88□□□□□ -0.19
DDX41-201ENST00000330503 PARP11Q9NR21 331 aa13.88□□□□□ -0.19
DDX41-201ENST00000330503 CACFD1Q9UGQ2 172 aa13.88□□□□□ -0.19
DDX41-201ENST00000330503 SPTBN1Q01082 2364 aaKnown RBP13.87□□□□□ -0.19
DDX41-201ENST00000330503 FAM90A9PA6NNJ1 464 aa13.87□□□□□ -0.19
DDX41-201ENST00000330503 C19orf84I3L1E1 186 aa13.87□□□□□ -0.19
DDX41-201ENST00000330503 PLA2G5P39877 138 aa13.87□□□□□ -0.19
DDX41-201ENST00000330503 BLOC1S1P78537 153 aa13.87□□□□□ -0.19
DDX41-201ENST00000330503 TUSC1Q2TAM9 212 aa13.87□□□□□ -0.19
DDX41-201ENST00000330503 TMEM14EPQ6UXP3 125 aa13.87□□□□□ -0.19
DDX41-201ENST00000330503 ZDHHC16Q969W1 377 aa13.87□□□□□ -0.19
DDX41-201ENST00000330503 ADTRPQ96IZ2 230 aa13.87□□□□□ -0.19
DDX41-201ENST00000330503 TSNAXQ99598 290 aaKnown RBP13.87□□□□□ -0.19
DDX41-201ENST00000330503 HRH4Q9H3N8 390 aa13.87□□□□□ -0.19
DDX41-201ENST00000330503 MMP26Q9NRE1 261 aa13.87□□□□□ -0.19
DDX41-201ENST00000330503 TRAV3A0A0B4J244 114 aa13.87□□□□□ -0.19
DDX41-201ENST00000330503 NQO2P16083 231 aa13.87□□□□□ -0.19
DDX41-201ENST00000330503 AVPI1Q5T686 147 aa13.87□□□□□ -0.19
DDX41-201ENST00000330503 BPIFCQ8NFQ6 507 aa13.87□□□□□ -0.19
DDX41-201ENST00000330503 OR4S2Q8NH73 311 aa13.87□□□□□ -0.19
DDX41-201ENST00000330503 OR4C12Q96R67 309 aa13.87□□□□□ -0.19
DDX41-201ENST00000330503 KRBOX1C9JBD0 128 aa13.86□□□□□ -0.19
DDX41-201ENST00000330503 CRYZL1O95825 349 aa13.86□□□□□ -0.19
DDX41-201ENST00000330503 FHITP49789 147 aa13.86□□□□□ -0.19
DDX41-201ENST00000330503 OR2B8PP59922 312 aa13.86□□□□□ -0.19
DDX41-201ENST00000330503 SRSF3P84103 164 aaKnown RBP13.86□□□□□ -0.19
DDX41-201ENST00000330503 RELBQ01201 579 aa13.86□□□□□ -0.19
DDX41-201ENST00000330503 SPINK9Q5DT21 86 aa13.86□□□□□ -0.19
DDX41-201ENST00000330503 Q6ZRG5 221 aa13.86□□□□□ -0.19
DDX41-201ENST00000330503 ZNF833PQ6ZTB9 187 aa13.86□□□□□ -0.19
DDX41-201ENST00000330503 ZNF525Q8N782 197 aa13.86□□□□□ -0.19
DDX41-201ENST00000330503 LYPD6BQ8NI32 183 aa13.86□□□□□ -0.19
DDX41-201ENST00000330503 ZNF596Q8TC21 504 aa13.86□□□□□ -0.19
DDX41-201ENST00000330503 RALYQ9UKM9 306 aaKnown RBP13.86□□□□□ -0.19
DDX41-201ENST00000330503 C1QL1O75973 258 aa13.85□□□□□ -0.19
DDX41-201ENST00000330503 PJVKQ0ZLH3 352 aa13.85□□□□□ -0.19
DDX41-201ENST00000330503 DTX2Q86UW9 622 aa13.85□□□□□ -0.19
DDX41-201ENST00000330503 DTD1Q8TEA8 209 aa13.85□□□□□ -0.19
DDX41-201ENST00000330503 NUDT19A8MXV4 375 aa13.85□□□□□ -0.19
DDX41-201ENST00000330503 RBMXL2O75526 392 aaKnown RBP13.85□□□□□ -0.19
DDX41-201ENST00000330503 DFFBO76075 338 aa13.85□□□□□ -0.19
DDX41-201ENST00000330503 ARHGDIBP52566 201 aa13.85□□□□□ -0.19
DDX41-201ENST00000330503 RUNX1Q01196 453 aa13.85□□□□□ -0.19
DDX41-201ENST00000330503 TMEM182Q6ZP80 229 aaPredicted RBP13.85□□□□□ -0.19
DDX41-201ENST00000330503 CCDC28AQ8IWP9 274 aa13.85□□□□□ -0.19
DDX41-201ENST00000330503 OR2G3Q8NGZ4 309 aa13.85□□□□□ -0.19
DDX41-201ENST00000330503 TMEM140Q9NV12 185 aa13.85□□□□□ -0.19
DDX41-201ENST00000330503 ACACBO00763 2458 aa13.84□□□□□ -0.19
DDX41-201ENST00000330503 DOCK11Q5JSL3 2073 aa13.84□□□□□ -0.19
DDX41-201ENST00000330503 TRBV23-1A0A0A0MS06 115 aa13.84□□□□□ -0.19
DDX41-201ENST00000330503 PMS2P5A8MQ11 134 aa13.84□□□□□ -0.19
DDX41-201ENST00000330503 J3QR06 171 aa13.84□□□□□ -0.19
DDX41-201ENST00000330503 ERVK-16P61578 105 aa13.84□□□□□ -0.19
DDX41-201ENST00000330503 UQCC3Q6UW78 93 aa13.84□□□□□ -0.19
DDX41-201ENST00000330503 IL34Q6ZMJ4 242 aa13.84□□□□□ -0.19
DDX41-201ENST00000330503 LINC00311Q8N616 119 aa13.84□□□□□ -0.19
DDX41-201ENST00000330503 C8orf31Q8N9H6 132 aa13.84□□□□□ -0.19
DDX41-201ENST00000330503 OR4A16Q8NH70 328 aa13.84□□□□□ -0.19
DDX41-201ENST00000330503 DCHS2Q6V1P9 2916 aa13.84□□□□□ -0.19
DDX41-201ENST00000330503 IGSF10Q6WRI0 2623 aa13.84□□□□□ -0.19
DDX41-201ENST00000330503 A0A087X0M5 115 aa13.84□□□□□ -0.19
DDX41-201ENST00000330503 A0A1B0GX30 115 aa13.84□□□□□ -0.19
DDX41-201ENST00000330503 RAB5CP51148 216 aa13.84□□□□□ -0.19
DDX41-201ENST00000330503 NEU4Q8WWR8 484 aaPredicted RBP13.84□□□□□ -0.19
DDX41-201ENST00000330503 CFAP46Q8IYW2 2715 aa13.83□□□□□ -0.2
DDX41-201ENST00000330503 CEBPZOSA8MTT3 80 aa13.83□□□□□ -0.2
DDX41-201ENST00000330503 IGHV1-8P0DP01 117 aa13.83□□□□□ -0.2
DDX41-201ENST00000330503 POU2AF1Q16633 256 aa13.83□□□□□ -0.2
DDX41-201ENST00000330503 GNPNAT1Q96EK6 184 aaPredicted RBP13.83□□□□□ -0.2
DDX41-201ENST00000330503 RHOVQ96L33 236 aa13.83□□□□□ -0.2
DDX41-201ENST00000330503 MRPL20Q9BYC9 149 aaKnown RBP13.83□□□□□ -0.2
DDX41-201ENST00000330503 STRAPQ9Y3F4 350 aaKnown RBP13.83□□□□□ -0.2
DDX41-201ENST00000330503 SRRM4A7MD48 611 aaKnown RBP13.82□□□□□ -0.2
DDX41-201ENST00000330503 SCO1O75880 301 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms