RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 DRAM1Q8N682 238 aa6.65□□□□□ -1.35
VMA21-201ENST00000330374 OR10P1Q8NGE3 313 aa6.65□□□□□ -1.35
VMA21-201ENST00000330374 FAM234AQ9H0X4 552 aa6.65□□□□□ -1.35
VMA21-201ENST00000330374 F2Z2F3 143 aa6.64□□□□□ -1.35
VMA21-201ENST00000330374 TMEM250H0YL14 139 aa6.64□□□□□ -1.35
VMA21-201ENST00000330374 SLC25A6P12236 298 aa6.64□□□□□ -1.35
VMA21-201ENST00000330374 OTX2P32243 289 aa6.64□□□□□ -1.35
VMA21-201ENST00000330374 TMPRSS3P57727 454 aa6.64□□□□□ -1.35
VMA21-201ENST00000330374 KRTDAPP60985 99 aa6.64□□□□□ -1.35
VMA21-201ENST00000330374 GNB1P62873 340 aa6.64□□□□□ -1.35
VMA21-201ENST00000330374 CEACAM21Q3KPI0 293 aa6.64□□□□□ -1.35
VMA21-201ENST00000330374 RP1L1Q8IWN7 2480 aaPredicted RBP6.64□□□□□ -1.35
VMA21-201ENST00000330374 MDFIC2A0A1B0GVS7 189 aa6.64□□□□□ -1.35
VMA21-201ENST00000330374 MARCH11A6NNE9 402 aa6.64□□□□□ -1.35
VMA21-201ENST00000330374 DLEU1O43261 78 aa6.64□□□□□ -1.35
VMA21-201ENST00000330374 GGCTO75223 188 aaKnown RBP6.64□□□□□ -1.35
VMA21-201ENST00000330374 IGLV2-14P01704 120 aa6.64□□□□□ -1.35
VMA21-201ENST00000330374 FRMD6-AS1P0C7T7 363 aa6.64□□□□□ -1.35
VMA21-201ENST00000330374 CDC34P49427 236 aaPredicted RBP6.64□□□□□ -1.35
VMA21-201ENST00000330374 SLC35B1P78383 322 aa6.64□□□□□ -1.35
VMA21-201ENST00000330374 NUFIP2Q7Z417 695 aaKnown RBP6.64□□□□□ -1.35
VMA21-201ENST00000330374 IFI44Q8TCB0 444 aa6.64□□□□□ -1.35
VMA21-201ENST00000330374 IGHV3-43A0A0B4J1X8 118 aa6.64□□□□□ -1.35
VMA21-201ENST00000330374 A0A1W2PPV4 95 aa6.64□□□□□ -1.35
VMA21-201ENST00000330374 GJE1A6NN92 205 aa6.64□□□□□ -1.35
VMA21-201ENST00000330374 DEFB108AA8MXU0 73 aa6.64□□□□□ -1.35
VMA21-201ENST00000330374 RBFOX2O43251 390 aaKnown RBP eCLIP6.64□□□□□ -1.35
VMA21-201ENST00000330374 SIAH2O43255 324 aa6.64□□□□□ -1.35
VMA21-201ENST00000330374 TCF21O43680 179 aa6.64□□□□□ -1.35
VMA21-201ENST00000330374 IGHV3-43DP0DP04 118 aa6.64□□□□□ -1.35
VMA21-201ENST00000330374 CCL4P13236 92 aa6.64□□□□□ -1.35
VMA21-201ENST00000330374 RAB4AP20338 218 aa6.64□□□□□ -1.35
VMA21-201ENST00000330374 KITLGP21583 273 aa6.64□□□□□ -1.35
VMA21-201ENST00000330374 MZT1Q08AG7 82 aa6.64□□□□□ -1.35
VMA21-201ENST00000330374 LINC01551Q86U37 167 aa6.64□□□□□ -1.35
VMA21-201ENST00000330374 OR5A2Q8NGI9 324 aa6.64□□□□□ -1.35
VMA21-201ENST00000330374 AGMATQ9BSE5 352 aa6.64□□□□□ -1.35
VMA21-201ENST00000330374 C1QTNF5Q9BXJ0 243 aa6.64□□□□□ -1.35
VMA21-201ENST00000330374 OR2D2Q9H210 308 aa6.64□□□□□ -1.35
VMA21-201ENST00000330374 TUBG2Q9NRH3 451 aa6.64□□□□□ -1.35
VMA21-201ENST00000330374 IGHV3-13P01766 116 aa6.64□□□□□ -1.35
VMA21-201ENST00000330374 IGHV3-7P01780 117 aa6.64□□□□□ -1.35
VMA21-201ENST00000330374 PDLIM4P50479 330 aa6.64□□□□□ -1.35
VMA21-201ENST00000330374 ZNF90Q03938 601 aa6.64□□□□□ -1.35
VMA21-201ENST00000330374 Q6ZWC4 215 aa6.64□□□□□ -1.35
VMA21-201ENST00000330374 GGNQ86UU5 652 aa6.64□□□□□ -1.35
VMA21-201ENST00000330374 ZCCHC14Q8WYQ9 949 aaKnown RBP6.64□□□□□ -1.35
VMA21-201ENST00000330374 ZNF391Q9UJN7 358 aa6.64□□□□□ -1.35
VMA21-201ENST00000330374 ANKRD30BLA7E2S9 258 aa6.63□□□□□ -1.35
VMA21-201ENST00000330374 F6UZH7 168 aa6.63□□□□□ -1.35
VMA21-201ENST00000330374 SLC25A17O43808 307 aa6.63□□□□□ -1.35
VMA21-201ENST00000330374 SERF1AO75920 110 aa6.63□□□□□ -1.35
VMA21-201ENST00000330374 S1PR2O95136 353 aa6.63□□□□□ -1.35
VMA21-201ENST00000330374 SRP14P37108 136 aaKnown RBP6.63□□□□□ -1.35
VMA21-201ENST00000330374 KIAA1644Q3SXP7 199 aa6.63□□□□□ -1.35
VMA21-201ENST00000330374 IGF2-ASQ6U949 168 aa6.63□□□□□ -1.35
VMA21-201ENST00000330374 TPRX1Q8N7U7 411 aa6.63□□□□□ -1.35
VMA21-201ENST00000330374 CADM4Q8NFZ8 388 aa6.63□□□□□ -1.35
VMA21-201ENST00000330374 RFESDQ8TAC1 157 aa6.63□□□□□ -1.35
VMA21-201ENST00000330374 WDYHV1Q96HA8 205 aa6.63□□□□□ -1.35
VMA21-201ENST00000330374 TMEM147Q9BVK8 224 aa6.63□□□□□ -1.35
VMA21-201ENST00000330374 NPCDR1Q9BY65 106 aa6.63□□□□□ -1.35
VMA21-201ENST00000330374 RAB9BQ9NP90 201 aa6.63□□□□□ -1.35
VMA21-201ENST00000330374 IGHV1-45A0A0A0MS14 117 aa6.63□□□□□ -1.35
VMA21-201ENST00000330374 ODAMA1E959 279 aa6.63□□□□□ -1.35
VMA21-201ENST00000330374 UMODP07911 640 aa6.63□□□□□ -1.35
VMA21-201ENST00000330374 RPL30P62888 115 aaKnown RBP6.63□□□□□ -1.35
VMA21-201ENST00000330374 C3AR1Q16581 482 aa6.63□□□□□ -1.35
VMA21-201ENST00000330374 CARFQ8N187 725 aa6.63□□□□□ -1.35
VMA21-201ENST00000330374 DTD1Q8TEA8 209 aa6.63□□□□□ -1.35
VMA21-201ENST00000330374 LSM10Q969L4 123 aaKnown RBP6.63□□□□□ -1.35
VMA21-201ENST00000330374 VAMP8Q9BV40 100 aa6.63□□□□□ -1.35
VMA21-201ENST00000330374 SF3B5Q9BWJ5 86 aaKnown RBP6.63□□□□□ -1.35
VMA21-201ENST00000330374 FBXL7Q9UJT9 491 aa6.63□□□□□ -1.35
VMA21-201ENST00000330374 NCKAP5O14513 1909 aa6.63□□□□□ -1.35
VMA21-201ENST00000330374 MC5RP33032 325 aa6.63□□□□□ -1.35
VMA21-201ENST00000330374 SMRP1Q8NCR6 262 aa6.63□□□□□ -1.35
VMA21-201ENST00000330374 BTF3L4Q96K17 158 aa6.63□□□□□ -1.35
VMA21-201ENST00000330374 TMEM210A6NLX4 147 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 F5H697 171 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 COX6A1P12074 109 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 CRISP2P16562 243 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 IER3P46695 156 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 OR52L2PQ8NGH6 319 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 TECTBQ96PL2 329 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 DEPPQ9NTK1 212 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 TMEM106BQ9NUM4 274 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 SCO2A0A1W2PP80 73 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 B3GALT5-AS1P59052 145 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 RPL15P61313 204 aaKnown RBP6.62□□□□□ -1.35
VMA21-201ENST00000330374 TMEM14EPQ6UXP3 125 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 Q6ZS49 121 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 HIPK2Q9H2X6 1198 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 LPAR2Q9HBW0 351 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 PXMP4Q9Y6I8 212 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 ASPMQ8IZT6 3477 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 C17orf98A8MV24 154 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 NXPH2O95156 264 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 OR2H2O95918 312 aa6.62□□□□□ -1.35
VMA21-201ENST00000330374 TRA2AQ13595 282 aaKnown RBP eCLIP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms