RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 RPL39P5Q59GN2 51 aa12.07□□□□□ -0.48
TPM3-206ENST00000330188 FAM180AQ6UWF9 173 aa12.07□□□□□ -0.48
TPM3-206ENST00000330188 Q8TCH9 128 aa12.07□□□□□ -0.48
TPM3-206ENST00000330188 FAM222BQ8WU58 562 aa12.07□□□□□ -0.48
TPM3-206ENST00000330188 DSCAML1Q8TD84 2053 aa12.06□□□□□ -0.48
TPM3-206ENST00000330188 RAI1Q7Z5J4 1906 aaPredicted RBP12.06□□□□□ -0.48
TPM3-206ENST00000330188 A0A1W2PPE3 182 aa12.06□□□□□ -0.48
TPM3-206ENST00000330188 C5orf52A6NGY3 159 aa12.06□□□□□ -0.48
TPM3-206ENST00000330188 C15orf62A8K5M9 175 aa12.06□□□□□ -0.48
TPM3-206ENST00000330188 IGHV3-7P01780 117 aa12.06□□□□□ -0.48
TPM3-206ENST00000330188 FGF7P21781 194 aa12.06□□□□□ -0.48
TPM3-206ENST00000330188 OR2B8PP59922 312 aa12.06□□□□□ -0.48
TPM3-206ENST00000330188 TFF3Q07654 80 aa12.06□□□□□ -0.48
TPM3-206ENST00000330188 PMS2P11Q13670 270 aa12.06□□□□□ -0.48
TPM3-206ENST00000330188 KRTCAP3Q53RY4 240 aa12.06□□□□□ -0.48
TPM3-206ENST00000330188 ADAM5Q6NVV9 412 aa12.06□□□□□ -0.48
TPM3-206ENST00000330188 HEPN1Q6WQI6 88 aa12.06□□□□□ -0.48
TPM3-206ENST00000330188 MRGPRGQ86SM5 289 aa12.06□□□□□ -0.48
TPM3-206ENST00000330188 OR6C3Q9NZP0 311 aa12.06□□□□□ -0.48
TPM3-206ENST00000330188 FAM90A9PA6NNJ1 464 aa12.05□□□□□ -0.48
TPM3-206ENST00000330188 A8MXE2 369 aa12.05□□□□□ -0.48
TPM3-206ENST00000330188 GNB2P62879 340 aa12.05□□□□□ -0.48
TPM3-206ENST00000330188 P2RX4Q99571 388 aa12.05□□□□□ -0.48
TPM3-206ENST00000330188 NCOR1P1Q9H4R4 102 aa12.05□□□□□ -0.48
TPM3-206ENST00000330188 SLC39A9Q9NUM3 307 aa12.05□□□□□ -0.48
TPM3-206ENST00000330188 VAX2Q9UIW0 290 aa12.05□□□□□ -0.48
TPM3-206ENST00000330188 TANC2Q9HCD6 1990 aa12.05□□□□□ -0.48
TPM3-206ENST00000330188 ZNF98A6NK75 572 aa12.05□□□□□ -0.48
TPM3-206ENST00000330188 SLC31A2O15432 143 aa12.05□□□□□ -0.48
TPM3-206ENST00000330188 IGHV1-46P01743 117 aa12.05□□□□□ -0.48
TPM3-206ENST00000330188 MDKP21741 143 aaPredicted RBP12.05□□□□□ -0.48
TPM3-206ENST00000330188 C17orf58Q2M2W7 97 aa12.05□□□□□ -0.48
TPM3-206ENST00000330188 UTF1Q5T230 341 aa12.05□□□□□ -0.48
TPM3-206ENST00000330188 DUX4L9Q6RFH8 374 aaPredicted RBP12.05□□□□□ -0.48
TPM3-206ENST00000330188 SSX9Q7RTT3 188 aa12.05□□□□□ -0.48
TPM3-206ENST00000330188 LHX4Q969G2 390 aa12.05□□□□□ -0.48
TPM3-206ENST00000330188 FAM234AQ9H0X4 552 aa12.05□□□□□ -0.48
TPM3-206ENST00000330188 GCM1Q9NP62 436 aa12.05□□□□□ -0.48
TPM3-206ENST00000330188 RNF7Q9UBF6 113 aa12.05□□□□□ -0.48
TPM3-206ENST00000330188 BOD1L1Q8NFC6 3051 aa12.05□□□□□ -0.48
TPM3-206ENST00000330188 RBFOX2O43251 390 aaKnown RBP eCLIP12.04□□□□□ -0.48
TPM3-206ENST00000330188 IFNA1P01562 189 aa12.04□□□□□ -0.48
TPM3-206ENST00000330188 BMP5P22003 454 aa12.04□□□□□ -0.48
TPM3-206ENST00000330188 CD40P25942 277 aa12.04□□□□□ -0.48
TPM3-206ENST00000330188 CCKARP32238 428 aa12.04□□□□□ -0.48
TPM3-206ENST00000330188 TNFAIP6P98066 277 aaPredicted RBP12.04□□□□□ -0.48
TPM3-206ENST00000330188 PRAMEF5Q5TYX0 476 aa12.04□□□□□ -0.48
TPM3-206ENST00000330188 STUMQ69YW2 141 aa12.04□□□□□ -0.48
TPM3-206ENST00000330188 C1orf229Q6ZS94 237 aaPredicted RBP12.04□□□□□ -0.48
TPM3-206ENST00000330188 SDSLQ96GA7 329 aa12.04□□□□□ -0.48
TPM3-206ENST00000330188 NPCDR1Q9BY65 106 aa12.04□□□□□ -0.48
TPM3-206ENST00000330188 SIRT7Q9NRC8 400 aa12.04□□□□□ -0.48
TPM3-206ENST00000330188 IL19Q9UHD0 177 aa12.04□□□□□ -0.48
TPM3-206ENST00000330188 CTXND1A0A1B0GTU2 59 aa12.04□□□□□ -0.48
TPM3-206ENST00000330188 UBE2CO00762 179 aa12.04□□□□□ -0.48
TPM3-206ENST00000330188 ITGB1BP1O14713 200 aa12.04□□□□□ -0.48
TPM3-206ENST00000330188 LAMA5O15230 3695 aa12.04□□□□□ -0.48
TPM3-206ENST00000330188 CYB5R3P00387 301 aaPredicted RBP12.04□□□□□ -0.48
TPM3-206ENST00000330188 MBP02144 154 aa12.04□□□□□ -0.48
TPM3-206ENST00000330188 S100A6P06703 90 aa12.04□□□□□ -0.48
TPM3-206ENST00000330188 SELENOVP59797 346 aa12.04□□□□□ -0.48
TPM3-206ENST00000330188 FFAR4Q5NUL3 377 aa12.04□□□□□ -0.48
TPM3-206ENST00000330188 ZNF343Q6P1L6 599 aa12.04□□□□□ -0.48
TPM3-206ENST00000330188 C1QL4Q86Z23 238 aa12.04□□□□□ -0.48
TPM3-206ENST00000330188 DDB2Q92466 427 aa12.04□□□□□ -0.48
TPM3-206ENST00000330188 LEAP2Q969E1 77 aa12.04□□□□□ -0.48
TPM3-206ENST00000330188 SLC25A22Q9H936 323 aa12.04□□□□□ -0.48
TPM3-206ENST00000330188 IFNA17P01571 189 aa12.03□□□□□ -0.48
TPM3-206ENST00000330188 SPCS3P61009 180 aa12.03□□□□□ -0.48
TPM3-206ENST00000330188 ELOBQ15370 118 aa12.03□□□□□ -0.48
TPM3-206ENST00000330188 VKORC1L1Q8N0U8 176 aa12.03□□□□□ -0.48
TPM3-206ENST00000330188 OR10G9Q8NGN4 311 aa12.03□□□□□ -0.48
TPM3-206ENST00000330188 OR10G7Q8NGN6 311 aa12.03□□□□□ -0.48
TPM3-206ENST00000330188 Q8WTZ3 238 aa12.03□□□□□ -0.48
TPM3-206ENST00000330188 S1PR3Q99500 378 aa12.03□□□□□ -0.48
TPM3-206ENST00000330188 C12orf57Q99622 126 aa12.03□□□□□ -0.48
TPM3-206ENST00000330188 GFOD1Q9NXC2 390 aa12.03□□□□□ -0.48
TPM3-206ENST00000330188 GAB2Q9UQC2 676 aa12.03□□□□□ -0.48
TPM3-206ENST00000330188 ZNF292O60281 2723 aa12.03□□□□□ -0.48
TPM3-206ENST00000330188 TET2Q6N021 2002 aaPredicted RBP12.03□□□□□ -0.48
TPM3-206ENST00000330188 KBTBD11-OT1A0A1B0GTJ5 212 aa12.02□□□□□ -0.48
TPM3-206ENST00000330188 CXorf65A6NEN9 183 aa12.02□□□□□ -0.48
TPM3-206ENST00000330188 B4DEV8 164 aa12.02□□□□□ -0.48
TPM3-206ENST00000330188 HMGB3O15347 200 aaKnown RBP12.02□□□□□ -0.48
TPM3-206ENST00000330188 KIR2DS2P43631 304 aa12.02□□□□□ -0.48
TPM3-206ENST00000330188 RAB7AP51149 207 aa12.02□□□□□ -0.48
TPM3-206ENST00000330188 RELBQ01201 579 aa12.02□□□□□ -0.48
TPM3-206ENST00000330188 PNRC1Q12796 327 aaPredicted RBP12.02□□□□□ -0.48
TPM3-206ENST00000330188 CT45A1Q5HYN5 189 aa12.02□□□□□ -0.48
TPM3-206ENST00000330188 OR52E5Q8NH55 327 aa12.02□□□□□ -0.48
TPM3-206ENST00000330188 OR4A16Q8NH70 328 aa12.02□□□□□ -0.48
TPM3-206ENST00000330188 CT45A3Q8NHU0 189 aa12.02□□□□□ -0.48
TPM3-206ENST00000330188 GAFA1Q96PS6 74 aa12.02□□□□□ -0.48
TPM3-206ENST00000330188 TMPRSS5Q9H3S3 457 aa12.02□□□□□ -0.48
TPM3-206ENST00000330188 LY86O95711 162 aa12.02□□□□□ -0.49
TPM3-206ENST00000330188 IGHV2-5P01817 119 aa12.02□□□□□ -0.49
TPM3-206ENST00000330188 CXCL1P09341 107 aa12.02□□□□□ -0.49
TPM3-206ENST00000330188 NQO2P16083 231 aa12.02□□□□□ -0.49
TPM3-206ENST00000330188 NBL1P41271 181 aa12.02□□□□□ -0.49
TPM3-206ENST00000330188 CD81P60033 236 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms