RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 USF3Q68DE3 2245 aa12.83□□□□□ -0.36
BRCC3-201ENST00000330045 LINC00473A8K010 186 aa12.83□□□□□ -0.36
BRCC3-201ENST00000330045 SSTR5P35346 364 aa12.83□□□□□ -0.36
BRCC3-201ENST00000330045 VWC2Q2TAL6 325 aa12.83□□□□□ -0.36
BRCC3-201ENST00000330045 PRAMEF6Q5VXH4 476 aa12.83□□□□□ -0.36
BRCC3-201ENST00000330045 WDR82Q6UXN9 313 aa12.83□□□□□ -0.36
BRCC3-201ENST00000330045 ZNF66Q6ZN08 573 aa12.83□□□□□ -0.36
BRCC3-201ENST00000330045 FAM214BQ7L5A3 538 aa12.83□□□□□ -0.36
BRCC3-201ENST00000330045 CLCF1Q9UBD9 225 aa12.83□□□□□ -0.36
BRCC3-201ENST00000330045 IGHV3-43A0A0B4J1X8 118 aa12.82□□□□□ -0.36
BRCC3-201ENST00000330045 H7BYZ3 331 aa12.82□□□□□ -0.36
BRCC3-201ENST00000330045 GATCO43716 136 aaKnown RBP12.82□□□□□ -0.36
BRCC3-201ENST00000330045 AGFG2O95081 481 aa12.82□□□□□ -0.36
BRCC3-201ENST00000330045 IGHV3-43DP0DP04 118 aa12.82□□□□□ -0.36
BRCC3-201ENST00000330045 LINC00205P59089 165 aa12.82□□□□□ -0.36
BRCC3-201ENST00000330045 SPINK9Q5DT21 86 aa12.82□□□□□ -0.36
BRCC3-201ENST00000330045 OR51G1Q8NGK1 321 aa12.82□□□□□ -0.36
BRCC3-201ENST00000330045 LURAP1Q96LR2 239 aa12.82□□□□□ -0.36
BRCC3-201ENST00000330045 OR5B12Q96R08 314 aa12.82□□□□□ -0.36
BRCC3-201ENST00000330045 PRDM13Q9H4Q3 707 aa12.82□□□□□ -0.36
BRCC3-201ENST00000330045 UFSP2Q9NUQ7 469 aa12.82□□□□□ -0.36
BRCC3-201ENST00000330045 CEP295Q9C0D2 2601 aa12.82□□□□□ -0.36
BRCC3-201ENST00000330045 CACNA1DQ01668 2161 aa12.82□□□□□ -0.36
BRCC3-201ENST00000330045 C17orf112F2Z3M2 114 aa12.82□□□□□ -0.36
BRCC3-201ENST00000330045 GALR1P47211 349 aa12.82□□□□□ -0.36
BRCC3-201ENST00000330045 CCL11P51671 97 aa12.82□□□□□ -0.36
BRCC3-201ENST00000330045 GNB2P62879 340 aa12.82□□□□□ -0.36
BRCC3-201ENST00000330045 COL10A1Q03692 680 aa12.82□□□□□ -0.36
BRCC3-201ENST00000330045 Q3ZCU0 254 aa12.82□□□□□ -0.36
BRCC3-201ENST00000330045 OR13A1Q8NGR1 328 aa12.82□□□□□ -0.36
BRCC3-201ENST00000330045 RFESDQ8TAC1 157 aa12.82□□□□□ -0.36
BRCC3-201ENST00000330045 TRIB1Q96RU8 372 aa12.82□□□□□ -0.36
BRCC3-201ENST00000330045 HSD17B10Q99714 261 aaKnown RBP12.82□□□□□ -0.36
BRCC3-201ENST00000330045 GFOD1Q9NXC2 390 aa12.82□□□□□ -0.36
BRCC3-201ENST00000330045 METRNQ9UJH8 293 aa12.82□□□□□ -0.36
BRCC3-201ENST00000330045 GAB2Q9UQC2 676 aa12.82□□□□□ -0.36
BRCC3-201ENST00000330045 DOCK11Q5JSL3 2073 aa12.81□□□□□ -0.36
BRCC3-201ENST00000330045 MARCH11A6NNE9 402 aa12.81□□□□□ -0.36
BRCC3-201ENST00000330045 ZNF891A8MT65 544 aaPredicted RBP12.81□□□□□ -0.36
BRCC3-201ENST00000330045 DEFB108AA8MXU0 73 aa12.81□□□□□ -0.36
BRCC3-201ENST00000330045 TIMM8AO60220 97 aaPredicted RBP12.81□□□□□ -0.36
BRCC3-201ENST00000330045 PAGE4O60829 102 aa12.81□□□□□ -0.36
BRCC3-201ENST00000330045 NDUFS6O75380 124 aaKnown RBP12.81□□□□□ -0.36
BRCC3-201ENST00000330045 IGKV3-15P01624 115 aa12.81□□□□□ -0.36
BRCC3-201ENST00000330045 HOXC12P31275 282 aa12.81□□□□□ -0.36
BRCC3-201ENST00000330045 CNEP1R1Q8N9A8 125 aa12.81□□□□□ -0.36
BRCC3-201ENST00000330045 PACRGQ96M98 296 aaPredicted RBP12.81□□□□□ -0.36
BRCC3-201ENST00000330045 PSG11Q9UQ72 335 aa12.81□□□□□ -0.36
BRCC3-201ENST00000330045 IFNL4K9M1U5 179 aa12.81□□□□□ -0.36
BRCC3-201ENST00000330045 ST8SIA5O15466 376 aa12.81□□□□□ -0.36
BRCC3-201ENST00000330045 TUBG1P23258 451 aa12.81□□□□□ -0.36
BRCC3-201ENST00000330045 DNLZQ5SXM8 178 aa12.81□□□□□ -0.36
BRCC3-201ENST00000330045 TGIF2LYQ8IUE0 185 aa12.81□□□□□ -0.36
BRCC3-201ENST00000330045 FDCSPQ8NFU4 85 aa12.81□□□□□ -0.36
BRCC3-201ENST00000330045 HIST1H2BLQ99880 126 aa12.81□□□□□ -0.36
BRCC3-201ENST00000330045 FZR1Q9UM11 496 aa12.81□□□□□ -0.36
BRCC3-201ENST00000330045 WASF3Q9UPY6 502 aa12.81□□□□□ -0.36
BRCC3-201ENST00000330045 GZMHP20718 246 aa12.8□□□□□ -0.36
BRCC3-201ENST00000330045 RTP5Q14D33 572 aa12.8□□□□□ -0.36
BRCC3-201ENST00000330045 NEIL1Q96FI4 390 aaPredicted RBP12.8□□□□□ -0.36
BRCC3-201ENST00000330045 PPP5D1E7EU14 171 aa12.8□□□□□ -0.36
BRCC3-201ENST00000330045 TNFSF10P50591 281 aa12.8□□□□□ -0.36
BRCC3-201ENST00000330045 FABP6P51161 128 aa12.8□□□□□ -0.36
BRCC3-201ENST00000330045 SMIM21Q3B7S5 101 aa12.8□□□□□ -0.36
BRCC3-201ENST00000330045 ACOT6Q3I5F7 207 aaPredicted RBP12.8□□□□□ -0.36
BRCC3-201ENST00000330045 TMEM183AQ8IXX5 376 aa12.8□□□□□ -0.36
BRCC3-201ENST00000330045 WDR31Q8NA23 367 aa12.8□□□□□ -0.36
BRCC3-201ENST00000330045 ANAPC16Q96DE5 110 aa12.8□□□□□ -0.36
BRCC3-201ENST00000330045 QTRT1Q9BXR0 403 aaKnown RBP12.8□□□□□ -0.36
BRCC3-201ENST00000330045 MSL2Q9HCI7 577 aa12.8□□□□□ -0.36
BRCC3-201ENST00000330045 CACNA1GO43497 2377 aa12.8□□□□□ -0.36
BRCC3-201ENST00000330045 SMCO3A2RU48 225 aa12.79□□□□□ -0.36
BRCC3-201ENST00000330045 C15orf62A8K5M9 175 aa12.79□□□□□ -0.36
BRCC3-201ENST00000330045 SPINT2O43291 252 aa12.79□□□□□ -0.36
BRCC3-201ENST00000330045 GYPAP02724 150 aa12.79□□□□□ -0.36
BRCC3-201ENST00000330045 DEFA4P12838 97 aa12.79□□□□□ -0.36
BRCC3-201ENST00000330045 CDC34P49427 236 aaPredicted RBP12.79□□□□□ -0.36
BRCC3-201ENST00000330045 DEFA6Q01524 100 aa12.79□□□□□ -0.36
BRCC3-201ENST00000330045 GAMTQ14353 236 aa12.79□□□□□ -0.36
BRCC3-201ENST00000330045 R3HDM4Q96D70 268 aa12.79□□□□□ -0.36
BRCC3-201ENST00000330045 HRASP01112 189 aa12.79□□□□□ -0.36
BRCC3-201ENST00000330045 ADH4P08319 380 aa12.79□□□□□ -0.36
BRCC3-201ENST00000330045 KITLGP21583 273 aa12.79□□□□□ -0.36
BRCC3-201ENST00000330045 SOX8P57073 446 aa12.79□□□□□ -0.36
BRCC3-201ENST00000330045 FOXF2Q12947 444 aa12.79□□□□□ -0.36
BRCC3-201ENST00000330045 GUSBP1Q15486 140 aa12.79□□□□□ -0.36
BRCC3-201ENST00000330045 LINC00469Q8N7U9 141 aa12.79□□□□□ -0.36
BRCC3-201ENST00000330045 ELOVL1Q9BW60 279 aa12.79□□□□□ -0.36
BRCC3-201ENST00000330045 C11orf94C9JXX5 98 aa12.78□□□□□ -0.36
BRCC3-201ENST00000330045 IGHG3P01860 377 aa12.78□□□□□ -0.36
BRCC3-201ENST00000330045 HTD2P86397 168 aa12.78□□□□□ -0.36
BRCC3-201ENST00000330045 LTC4SQ16873 150 aa12.78□□□□□ -0.36
BRCC3-201ENST00000330045 CLEC12BQ2HXU8 276 aa12.78□□□□□ -0.36
BRCC3-201ENST00000330045 S100PBPQ96BU1 408 aa12.78□□□□□ -0.36
BRCC3-201ENST00000330045 DIRC2Q96SL1 478 aa12.78□□□□□ -0.36
BRCC3-201ENST00000330045 PCGF1Q9BSM1 259 aa12.78□□□□□ -0.36
BRCC3-201ENST00000330045 DCTN5Q9BTE1 182 aa12.78□□□□□ -0.36
BRCC3-201ENST00000330045 ANKRD11Q6UB99 2663 aaPredicted RBP12.78□□□□□ -0.36
BRCC3-201ENST00000330045 A0A1W2PPQ1 181 aa12.78□□□□□ -0.36
BRCC3-201ENST00000330045 C15orf65H3BRN8 121 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms