RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 C19orf54Q5BKX5 351 aa21.55■■□□□ 1.04
ATPAF1-201ENST00000329231 TMEM69Q5SWH9 247 aa21.55■■□□□ 1.04
ATPAF1-201ENST00000329231 MZT2AQ6P582 158 aa21.55■■□□□ 1.04
ATPAF1-201ENST00000329231 PPP1R27Q86WC6 154 aa21.55■■□□□ 1.04
ATPAF1-201ENST00000329231 HOGA1Q86XE5 327 aa21.55■■□□□ 1.04
ATPAF1-201ENST00000329231 UBE2E2Q96LR5 201 aa21.55■■□□□ 1.04
ATPAF1-201ENST00000329231 DUX3Q96PT4 197 aa21.55■■□□□ 1.04
ATPAF1-201ENST00000329231 FOXA2Q9Y261 457 aaPredicted RBP21.55■■□□□ 1.04
ATPAF1-201ENST00000329231 A0A1W2PN81 502 aa21.54■■□□□ 1.04
ATPAF1-201ENST00000329231 SHOXO15266 292 aa21.54■■□□□ 1.04
ATPAF1-201ENST00000329231 IGLV2-23P01705 113 aa21.54■■□□□ 1.04
ATPAF1-201ENST00000329231 EIF4EP06730 217 aaKnown RBP21.54■■□□□ 1.04
ATPAF1-201ENST00000329231 EGR2P11161 476 aaPredicted RBP21.54■■□□□ 1.04
ATPAF1-201ENST00000329231 CHRNA7P36544 502 aa21.54■■□□□ 1.04
ATPAF1-201ENST00000329231 RAB9AP51151 201 aa21.54■■□□□ 1.04
ATPAF1-201ENST00000329231 SPCS2Q15005 226 aa21.54■■□□□ 1.04
ATPAF1-201ENST00000329231 DEFB136Q30KP8 78 aa21.54■■□□□ 1.04
ATPAF1-201ENST00000329231 DDB2Q92466 427 aa21.54■■□□□ 1.04
ATPAF1-201ENST00000329231 VSIG4Q9Y279 399 aa21.54■■□□□ 1.04
ATPAF1-201ENST00000329231 CBX5P45973 191 aa21.53■■□□□ 1.04
ATPAF1-201ENST00000329231 TAS2R20P59543 309 aa21.53■■□□□ 1.04
ATPAF1-201ENST00000329231 AKIRIN2Q53H80 203 aa21.53■■□□□ 1.04
ATPAF1-201ENST00000329231 GVQW1Q8N7I0 195 aa21.53■■□□□ 1.04
ATPAF1-201ENST00000329231 ZNF491Q8N8L2 437 aa21.53■■□□□ 1.04
ATPAF1-201ENST00000329231 ARPC1AQ92747 370 aa21.53■■□□□ 1.04
ATPAF1-201ENST00000329231 TPSG1Q9NRR2 321 aa21.53■■□□□ 1.04
ATPAF1-201ENST00000329231 LINC00473A8K010 186 aa21.52■■□□□ 1.04
ATPAF1-201ENST00000329231 PTHLHP12272 177 aa21.52■■□□□ 1.04
ATPAF1-201ENST00000329231 RAB25P57735 213 aa21.52■■□□□ 1.04
ATPAF1-201ENST00000329231 KIAA0141Q14154 515 aaPredicted RBP21.52■■□□□ 1.04
ATPAF1-201ENST00000329231 FXYD3Q14802 87 aa21.52■■□□□ 1.04
ATPAF1-201ENST00000329231 ACTBL2Q562R1 376 aa21.52■■□□□ 1.04
ATPAF1-201ENST00000329231 UNQ5815/PRO19632Q6UWF5 114 aa21.52■■□□□ 1.04
ATPAF1-201ENST00000329231 FAM103A1Q9BTL3 118 aaKnown RBP21.52■■□□□ 1.04
ATPAF1-201ENST00000329231 RBMX2Q9Y388 322 aaKnown RBP21.52■■□□□ 1.04
ATPAF1-201ENST00000329231 IGKV1D-13A0A0B4J2D9 117 aa21.51■■□□□ 1.03
ATPAF1-201ENST00000329231 SMIM31A0A1B0GVY4 71 aa21.51■■□□□ 1.03
ATPAF1-201ENST00000329231 HPGDSO60760 199 aa21.51■■□□□ 1.03
ATPAF1-201ENST00000329231 NOL3O60936 208 aaKnown RBP21.51■■□□□ 1.03
ATPAF1-201ENST00000329231 TUSC2O75896 110 aa21.51■■□□□ 1.03
ATPAF1-201ENST00000329231 CRYGBP07316 175 aa21.51■■□□□ 1.03
ATPAF1-201ENST00000329231 IGKV1-13P0DP09 117 aa21.51■■□□□ 1.03
ATPAF1-201ENST00000329231 PYHIN1Q6K0P9 492 aa21.51■■□□□ 1.03
ATPAF1-201ENST00000329231 LFNGQ8NES3 379 aa21.51■■□□□ 1.03
ATPAF1-201ENST00000329231 OR5M8Q8NGP6 311 aa21.51■■□□□ 1.03
ATPAF1-201ENST00000329231 DPF1Q92782 380 aa21.51■■□□□ 1.03
ATPAF1-201ENST00000329231 PRELID3BQ9Y3B1 194 aa21.51■■□□□ 1.03
ATPAF1-201ENST00000329231 SOX15O60248 233 aa21.5■■□□□ 1.03
ATPAF1-201ENST00000329231 CNIH1O95406 144 aa21.5■■□□□ 1.03
ATPAF1-201ENST00000329231 CRYZL1O95825 349 aa21.5■■□□□ 1.03
ATPAF1-201ENST00000329231 ELK1P19419 428 aa21.5■■□□□ 1.03
ATPAF1-201ENST00000329231 VMA21Q3ZAQ7 101 aa21.5■■□□□ 1.03
ATPAF1-201ENST00000329231 GRPEL2Q8TAA5 225 aa21.5■■□□□ 1.03
ATPAF1-201ENST00000329231 OSR1Q8TAX0 266 aaPredicted RBP21.5■■□□□ 1.03
ATPAF1-201ENST00000329231 GNB4Q9HAV0 340 aa21.5■■□□□ 1.03
ATPAF1-201ENST00000329231 AURKAIP1Q9NWT8 199 aaPredicted RBP21.5■■□□□ 1.03
ATPAF1-201ENST00000329231 SRRM4A7MD48 611 aaKnown RBP21.49■■□□□ 1.03
ATPAF1-201ENST00000329231 CD40LGP29965 261 aa21.49■■□□□ 1.03
ATPAF1-201ENST00000329231 GNB1P62873 340 aa21.49■■□□□ 1.03
ATPAF1-201ENST00000329231 RUNX1Q01196 453 aa21.49■■□□□ 1.03
ATPAF1-201ENST00000329231 KCTD9Q7L273 389 aa21.49■■□□□ 1.03
ATPAF1-201ENST00000329231 OR11H1Q8NG94 326 aa21.49■■□□□ 1.03
ATPAF1-201ENST00000329231 I3L521 148 aa21.48■■□□□ 1.03
ATPAF1-201ENST00000329231 ARPC1BO15143 372 aaKnown RBP21.48■■□□□ 1.03
ATPAF1-201ENST00000329231 IGLV2-14P01704 120 aa21.48■■□□□ 1.03
ATPAF1-201ENST00000329231 FCGR2CP31995 323 aa21.48■■□□□ 1.03
ATPAF1-201ENST00000329231 UBE2KP61086 200 aa21.48■■□□□ 1.03
ATPAF1-201ENST00000329231 PJVKQ0ZLH3 352 aa21.48■■□□□ 1.03
ATPAF1-201ENST00000329231 FHL3Q13643 280 aa21.48■■□□□ 1.03
ATPAF1-201ENST00000329231 TEX45Q8NA69 505 aa21.48■■□□□ 1.03
ATPAF1-201ENST00000329231 ISOC1Q96CN7 298 aa21.48■■□□□ 1.03
ATPAF1-201ENST00000329231 HSD17B10Q99714 261 aaKnown RBP21.48■■□□□ 1.03
ATPAF1-201ENST00000329231 IFT46Q9NQC8 304 aa21.48■■□□□ 1.03
ATPAF1-201ENST00000329231 MRPS7Q9Y2R9 242 aaKnown RBP21.48■■□□□ 1.03
ATPAF1-201ENST00000329231 FCGR3BO75015 233 aa21.47■■□□□ 1.03
ATPAF1-201ENST00000329231 PRSS3P35030 304 aa21.47■■□□□ 1.03
ATPAF1-201ENST00000329231 OVCH2Q7RTZ1 564 aa21.47■■□□□ 1.03
ATPAF1-201ENST00000329231 MRAPQ8TCY5 172 aa21.47■■□□□ 1.03
ATPAF1-201ENST00000329231 SNAPC3Q92966 411 aa21.47■■□□□ 1.03
ATPAF1-201ENST00000329231 DCUN1D5Q9BTE7 237 aa21.47■■□□□ 1.03
ATPAF1-201ENST00000329231 FAM25AB3EWG3 89 aa21.46■■□□□ 1.03
ATPAF1-201ENST00000329231 FAM25CB3EWG5 89 aa21.46■■□□□ 1.03
ATPAF1-201ENST00000329231 FAM25GB3EWG6 89 aa21.46■■□□□ 1.03
ATPAF1-201ENST00000329231 H3BMQ9 156 aa21.46■■□□□ 1.03
ATPAF1-201ENST00000329231 FCER2P06734 321 aa21.46■■□□□ 1.03
ATPAF1-201ENST00000329231 AADACP22760 399 aa21.46■■□□□ 1.03
ATPAF1-201ENST00000329231 EGFEM1PQ0D2K5 195 aa21.46■■□□□ 1.03
ATPAF1-201ENST00000329231 OR5AP2Q8NGF4 316 aa21.46■■□□□ 1.03
ATPAF1-201ENST00000329231 OR1N2Q8NGR9 330 aa21.46■■□□□ 1.03
ATPAF1-201ENST00000329231 DYNC2LI1Q8TCX1 351 aa21.46■■□□□ 1.03
ATPAF1-201ENST00000329231 CASTOR1Q8WTX7 329 aa21.46■■□□□ 1.03
ATPAF1-201ENST00000329231 TMEM68Q96MH6 324 aa21.46■■□□□ 1.03
ATPAF1-201ENST00000329231 OR5B12Q96R08 314 aa21.46■■□□□ 1.03
ATPAF1-201ENST00000329231 CEPT1Q9Y6K0 416 aa21.46■■□□□ 1.03
ATPAF1-201ENST00000329231 PRKDCP78527 4128 aaKnown RBP21.45■■□□□ 1.02
ATPAF1-201ENST00000329231 MEIS3P1A6NDR6 274 aa21.45■■□□□ 1.02
ATPAF1-201ENST00000329231 HOXD3P31249 432 aaPredicted RBP21.45■■□□□ 1.02
ATPAF1-201ENST00000329231 SSBP2P81877 361 aaPredicted RBP21.45■■□□□ 1.02
ATPAF1-201ENST00000329231 MSMO1Q15800 293 aa21.45■■□□□ 1.02
ATPAF1-201ENST00000329231 SECTM1Q8WVN6 248 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms