RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 FAM209BQ5JX69 171 aa11.73□□□□□ -0.53
ATP2C1-201ENST00000328560 QTRT1Q9BXR0 403 aaKnown RBP11.73□□□□□ -0.53
ATP2C1-201ENST00000328560 WASF3Q9UPY6 502 aa11.73□□□□□ -0.53
ATP2C1-201ENST00000328560 MARCH11A6NNE9 402 aa11.73□□□□□ -0.53
ATP2C1-201ENST00000328560 SOX15O60248 233 aa11.73□□□□□ -0.53
ATP2C1-201ENST00000328560 IFNA10P01566 189 aa11.73□□□□□ -0.53
ATP2C1-201ENST00000328560 GPR12P47775 334 aa11.73□□□□□ -0.53
ATP2C1-201ENST00000328560 C21orf62-AS1Q17RA5 79 aa11.73□□□□□ -0.53
ATP2C1-201ENST00000328560 ZADH2Q8N4Q0 377 aa11.73□□□□□ -0.53
ATP2C1-201ENST00000328560 WDR31Q8NA23 367 aa11.73□□□□□ -0.53
ATP2C1-201ENST00000328560 EDARADDQ8WWZ3 215 aa11.73□□□□□ -0.53
ATP2C1-201ENST00000328560 ACTR3CQ9C0K3 210 aaPredicted RBP11.73□□□□□ -0.53
ATP2C1-201ENST00000328560 CRYAAP02489 173 aa11.73□□□□□ -0.53
ATP2C1-201ENST00000328560 COX5AP20674 150 aa11.73□□□□□ -0.53
ATP2C1-201ENST00000328560 BSXQ3C1V8 233 aa11.73□□□□□ -0.53
ATP2C1-201ENST00000328560 ZNF383Q8NA42 475 aa11.73□□□□□ -0.53
ATP2C1-201ENST00000328560 ZBTB34Q8NCN2 500 aa11.73□□□□□ -0.53
ATP2C1-201ENST00000328560 R3HDM4Q96D70 268 aa11.73□□□□□ -0.53
ATP2C1-201ENST00000328560 NAT8Q9UHE5 227 aa11.73□□□□□ -0.53
ATP2C1-201ENST00000328560 PROCRQ9UNN8 238 aa11.73□□□□□ -0.53
ATP2C1-201ENST00000328560 M0R1X1 148 aa11.72□□□□□ -0.53
ATP2C1-201ENST00000328560 PRAMEF5Q5TYX0 476 aa11.72□□□□□ -0.53
ATP2C1-201ENST00000328560 CST9LP1Q5W188 147 aa11.72□□□□□ -0.53
ATP2C1-201ENST00000328560 LEAP2Q969E1 77 aa11.72□□□□□ -0.53
ATP2C1-201ENST00000328560 P2RX4Q99571 388 aa11.72□□□□□ -0.53
ATP2C1-201ENST00000328560 PARLQ9H300 379 aa11.72□□□□□ -0.53
ATP2C1-201ENST00000328560 CFAP47Q6ZTR5 3102 aa11.72□□□□□ -0.53
ATP2C1-201ENST00000328560 SPTBN2O15020 2390 aa11.72□□□□□ -0.53
ATP2C1-201ENST00000328560 CTXND1A0A1B0GTU2 59 aa11.72□□□□□ -0.53
ATP2C1-201ENST00000328560 H7BYZ3 331 aa11.72□□□□□ -0.53
ATP2C1-201ENST00000328560 CLDN14O95500 239 aa11.72□□□□□ -0.53
ATP2C1-201ENST00000328560 WNT2P09544 360 aa11.72□□□□□ -0.53
ATP2C1-201ENST00000328560 BTF3P20290 206 aaKnown RBP11.72□□□□□ -0.53
ATP2C1-201ENST00000328560 PRDX2P32119 198 aa11.72□□□□□ -0.53
ATP2C1-201ENST00000328560 CD177Q8N6Q3 437 aa11.72□□□□□ -0.53
ATP2C1-201ENST00000328560 HES4Q9HCC6 221 aa11.72□□□□□ -0.53
ATP2C1-201ENST00000328560 TRAV38-1A0A0B4J264 116 aa11.72□□□□□ -0.53
ATP2C1-201ENST00000328560 A0A1W2PPQ1 181 aa11.72□□□□□ -0.53
ATP2C1-201ENST00000328560 SEC14L6B5MCN3 397 aa11.72□□□□□ -0.53
ATP2C1-201ENST00000328560 ZNF83P51522 516 aa11.72□□□□□ -0.53
ATP2C1-201ENST00000328560 TAAR6Q96RI8 345 aa11.72□□□□□ -0.53
ATP2C1-201ENST00000328560 PFDN5Q99471 154 aa11.72□□□□□ -0.53
ATP2C1-201ENST00000328560 ELOVL1Q9BW60 279 aa11.72□□□□□ -0.53
ATP2C1-201ENST00000328560 NPCDR1Q9BY65 106 aa11.72□□□□□ -0.53
ATP2C1-201ENST00000328560 HEYLQ9NQ87 328 aaPredicted RBP11.72□□□□□ -0.53
ATP2C1-201ENST00000328560 LRP11Q86VZ4 500 aa11.71□□□□□ -0.53
ATP2C1-201ENST00000328560 ZNRF1Q8ND25 227 aa11.71□□□□□ -0.53
ATP2C1-201ENST00000328560 OR5B12Q96R08 314 aa11.71□□□□□ -0.53
ATP2C1-201ENST00000328560 PATZ1Q9HBE1 687 aaKnown RBP11.71□□□□□ -0.53
ATP2C1-201ENST00000328560 OPN1MWP04001 364 aa11.71□□□□□ -0.54
ATP2C1-201ENST00000328560 OR9G9P0C7N8 305 aa11.71□□□□□ -0.54
ATP2C1-201ENST00000328560 OPN1MW2P0DN77 364 aa11.71□□□□□ -0.54
ATP2C1-201ENST00000328560 OPN1MW3P0DN78 364 aa11.71□□□□□ -0.54
ATP2C1-201ENST00000328560 RPL39P5Q59GN2 51 aa11.71□□□□□ -0.54
ATP2C1-201ENST00000328560 FAM201AQ5SY85 155 aa11.71□□□□□ -0.54
ATP2C1-201ENST00000328560 S100PBPQ96BU1 408 aa11.71□□□□□ -0.54
ATP2C1-201ENST00000328560 HIPK2Q9H2X6 1198 aa11.71□□□□□ -0.54
ATP2C1-201ENST00000328560 RAB29O14966 203 aa11.7□□□□□ -0.54
ATP2C1-201ENST00000328560 GALR2O43603 387 aaPredicted RBP11.7□□□□□ -0.54
ATP2C1-201ENST00000328560 IGKV3-15P01624 115 aa11.7□□□□□ -0.54
ATP2C1-201ENST00000328560 ATP6V1FQ16864 119 aa11.7□□□□□ -0.54
ATP2C1-201ENST00000328560 OR51G1Q8NGK1 321 aa11.7□□□□□ -0.54
ATP2C1-201ENST00000328560 CIB3Q96Q77 187 aaPredicted RBP11.7□□□□□ -0.54
ATP2C1-201ENST00000328560 TMEM204Q9BSN7 226 aa11.7□□□□□ -0.54
ATP2C1-201ENST00000328560 PRR33A8MZF0 331 aa11.7□□□□□ -0.54
ATP2C1-201ENST00000328560 WT1P19544 449 aaPredicted RBP11.7□□□□□ -0.54
ATP2C1-201ENST00000328560 GALR1P47211 349 aa11.7□□□□□ -0.54
ATP2C1-201ENST00000328560 RPL23P62829 140 aaKnown RBP11.7□□□□□ -0.54
ATP2C1-201ENST00000328560 OR4A16Q8NH70 328 aa11.7□□□□□ -0.54
ATP2C1-201ENST00000328560 HINT2Q9BX68 163 aa11.7□□□□□ -0.54
ATP2C1-201ENST00000328560 C1QTNF9BB2RNN3 333 aa11.7□□□□□ -0.54
ATP2C1-201ENST00000328560 KBTBD11O94819 623 aa11.7□□□□□ -0.54
ATP2C1-201ENST00000328560 LY86O95711 162 aa11.7□□□□□ -0.54
ATP2C1-201ENST00000328560 CHRNA7P36544 502 aa11.7□□□□□ -0.54
ATP2C1-201ENST00000328560 HIST3H2BBQ8N257 126 aa11.7□□□□□ -0.54
ATP2C1-201ENST00000328560 OR10A7Q8NGE5 316 aa11.7□□□□□ -0.54
ATP2C1-201ENST00000328560 OR13D1Q8NGV5 346 aa11.7□□□□□ -0.54
ATP2C1-201ENST00000328560 IGHV2OR16-5A0A0B4J2B6 119 aa11.69□□□□□ -0.54
ATP2C1-201ENST00000328560 A0A1W2PPV4 95 aa11.69□□□□□ -0.54
ATP2C1-201ENST00000328560 SPRY3O43610 288 aa11.69□□□□□ -0.54
ATP2C1-201ENST00000328560 IGHG3P01860 377 aa11.69□□□□□ -0.54
ATP2C1-201ENST00000328560 CDC34P49427 236 aaPredicted RBP11.69□□□□□ -0.54
ATP2C1-201ENST00000328560 CYP2G1PQ6ZSU1 146 aa11.69□□□□□ -0.54
ATP2C1-201ENST00000328560 HSD17B10Q99714 261 aaKnown RBP11.69□□□□□ -0.54
ATP2C1-201ENST00000328560 PCGF1Q9BSM1 259 aa11.69□□□□□ -0.54
ATP2C1-201ENST00000328560 TIMM9Q9Y5J7 89 aa11.69□□□□□ -0.54
ATP2C1-201ENST00000328560 PMS2P5A8MQ11 134 aa11.69□□□□□ -0.54
ATP2C1-201ENST00000328560 AQP7O14520 342 aa11.69□□□□□ -0.54
ATP2C1-201ENST00000328560 IGHV2-70P01814 119 aa11.69□□□□□ -0.54
ATP2C1-201ENST00000328560 MBP02144 154 aa11.69□□□□□ -0.54
ATP2C1-201ENST00000328560 RND2P52198 227 aa11.69□□□□□ -0.54
ATP2C1-201ENST00000328560 MZT1Q08AG7 82 aa11.69□□□□□ -0.54
ATP2C1-201ENST00000328560 DEFB108BQ8NET1 73 aa11.69□□□□□ -0.54
ATP2C1-201ENST00000328560 OTOGLQ3ZCN5 2332 aa11.69□□□□□ -0.54
ATP2C1-201ENST00000328560 IGHV1-18A0A0C4DH31 117 aa11.69□□□□□ -0.54
ATP2C1-201ENST00000328560 ZNF891A8MT65 544 aaPredicted RBP11.69□□□□□ -0.54
ATP2C1-201ENST00000328560 C11orf94C9JXX5 98 aa11.69□□□□□ -0.54
ATP2C1-201ENST00000328560 M0R1B8 84 aa11.69□□□□□ -0.54
ATP2C1-201ENST00000328560 SELLP14151 372 aa11.69□□□□□ -0.54
ATP2C1-201ENST00000328560 SPRNQ5BIV9 151 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms