RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 GPR157Q5UAW9 335 aa12.32□□□□□ -0.44
PRPF3-201ENST00000324862 SSX9Q7RTT3 188 aa12.32□□□□□ -0.44
PRPF3-201ENST00000324862 CHIAQ9BZP6 476 aa12.32□□□□□ -0.44
PRPF3-201ENST00000324862 MGAT4CQ9UBM8 478 aa12.32□□□□□ -0.44
PRPF3-201ENST00000324862 A0A0U1RQK1 487 aa12.31□□□□□ -0.44
PRPF3-201ENST00000324862 H7C2Y5 167 aa12.31□□□□□ -0.44
PRPF3-201ENST00000324862 KRASP01116 189 aa12.31□□□□□ -0.44
PRPF3-201ENST00000324862 ANXA3P12429 323 aa12.31□□□□□ -0.44
PRPF3-201ENST00000324862 IL3RAP26951 378 aa12.31□□□□□ -0.44
PRPF3-201ENST00000324862 G6PCP35575 357 aa12.31□□□□□ -0.44
PRPF3-201ENST00000324862 TAGLNQ01995 201 aaKnown RBP12.31□□□□□ -0.44
PRPF3-201ENST00000324862 BCL6BQ8N143 479 aaPredicted RBP12.31□□□□□ -0.44
PRPF3-201ENST00000324862 FAM216AQ8WUB2 273 aa12.31□□□□□ -0.44
PRPF3-201ENST00000324862 SEC22AQ96IW7 307 aa12.31□□□□□ -0.44
PRPF3-201ENST00000324862 AMMECR1Q9Y4X0 333 aaPredicted RBP12.31□□□□□ -0.44
PRPF3-201ENST00000324862 MDFIC2A0A1B0GVS7 189 aa12.31□□□□□ -0.44
PRPF3-201ENST00000324862 THBS3P49746 956 aa12.31□□□□□ -0.44
PRPF3-201ENST00000324862 ZNF695Q8IW36 515 aa12.31□□□□□ -0.44
PRPF3-201ENST00000324862 OR5AN1Q8NGI8 311 aa12.31□□□□□ -0.44
PRPF3-201ENST00000324862 COQ8AQ8NI60 647 aa12.31□□□□□ -0.44
PRPF3-201ENST00000324862 C18orf12Q96KH6 178 aa12.31□□□□□ -0.44
PRPF3-201ENST00000324862 OR10C1Q96KK4 312 aa12.31□□□□□ -0.44
PRPF3-201ENST00000324862 TMEM56Q96MV1 263 aa12.31□□□□□ -0.44
PRPF3-201ENST00000324862 SLC35D1Q9NTN3 355 aa12.31□□□□□ -0.44
PRPF3-201ENST00000324862 TMEM56-RWDD3S4R434 201 aa12.31□□□□□ -0.44
PRPF3-201ENST00000324862 C13orf42A0A1B0GVH6 325 aa12.3□□□□□ -0.44
PRPF3-201ENST00000324862 SRRM4A7MD48 611 aaKnown RBP12.3□□□□□ -0.44
PRPF3-201ENST00000324862 RNF212BA8MTL3 300 aa12.3□□□□□ -0.44
PRPF3-201ENST00000324862 IGKV1-5P01602 117 aa12.3□□□□□ -0.44
PRPF3-201ENST00000324862 GAPDHP04406 335 aaKnown RBP12.3□□□□□ -0.44
PRPF3-201ENST00000324862 SULT1A3P0DMM9 295 aa12.3□□□□□ -0.44
PRPF3-201ENST00000324862 SULT1A4P0DMN0 295 aa12.3□□□□□ -0.44
PRPF3-201ENST00000324862 C11orf88Q6PI97 169 aa12.3□□□□□ -0.44
PRPF3-201ENST00000324862 FYTTD1Q96QD9 318 aaKnown RBP12.3□□□□□ -0.44
PRPF3-201ENST00000324862 SMLR1H3BR10 107 aa12.3□□□□□ -0.44
PRPF3-201ENST00000324862 HNF4GQ14541 408 aa12.3□□□□□ -0.44
PRPF3-201ENST00000324862 FAM120AOSQ5T036 256 aa12.3□□□□□ -0.44
PRPF3-201ENST00000324862 GGNBP1Q5YKI7 109 aa12.3□□□□□ -0.44
PRPF3-201ENST00000324862 PRELID3BQ9Y3B1 194 aa12.3□□□□□ -0.44
PRPF3-201ENST00000324862 NXPH3O95157 252 aa12.29□□□□□ -0.44
PRPF3-201ENST00000324862 CNTFRP26992 372 aa12.29□□□□□ -0.44
PRPF3-201ENST00000324862 Q6ZRM9 215 aa12.29□□□□□ -0.44
PRPF3-201ENST00000324862 LGI3Q8N145 548 aa12.29□□□□□ -0.44
PRPF3-201ENST00000324862 CFHR4Q92496 578 aa12.29□□□□□ -0.44
PRPF3-201ENST00000324862 RBPMSQ93062 196 aaKnown RBP12.29□□□□□ -0.44
PRPF3-201ENST00000324862 RANGRFQ9HD47 186 aaPredicted RBP12.29□□□□□ -0.44
PRPF3-201ENST00000324862 HMX3A6NHT5 357 aa12.29□□□□□ -0.44
PRPF3-201ENST00000324862 Q71RC1 249 aaPredicted RBP12.29□□□□□ -0.44
PRPF3-201ENST00000324862 NEURL2Q9BR09 285 aa12.29□□□□□ -0.44
PRPF3-201ENST00000324862 NSG2Q9Y328 171 aa12.29□□□□□ -0.44
PRPF3-201ENST00000324862 J3QLI3 93 aa12.28□□□□□ -0.44
PRPF3-201ENST00000324862 CEACAM3P40198 252 aa12.28□□□□□ -0.44
PRPF3-201ENST00000324862 MINOS1Q5TGZ0 78 aa12.28□□□□□ -0.44
PRPF3-201ENST00000324862 FAM71F2Q6NXP2 309 aa12.28□□□□□ -0.44
PRPF3-201ENST00000324862 LRTM2Q8N967 370 aa12.28□□□□□ -0.44
PRPF3-201ENST00000324862 MINOS1-NBL1R4GNA1 71 aa12.28□□□□□ -0.44
PRPF3-201ENST00000324862 C5orf51A6NDU8 294 aa12.28□□□□□ -0.44
PRPF3-201ENST00000324862 AKR1C2P52895 323 aa12.28□□□□□ -0.44
PRPF3-201ENST00000324862 MIDNQ504T8 468 aa12.28□□□□□ -0.44
PRPF3-201ENST00000324862 Q5BKY6 102 aa12.28□□□□□ -0.44
PRPF3-201ENST00000324862 OR5M8Q8NGP6 311 aa12.28□□□□□ -0.44
PRPF3-201ENST00000324862 YAE1D1Q9NRH1 226 aa12.28□□□□□ -0.44
PRPF3-201ENST00000324862 TBL2Q9Y4P3 447 aaKnown RBP12.28□□□□□ -0.44
PRPF3-201ENST00000324862 MTORP42345 2549 aa12.28□□□□□ -0.44
PRPF3-201ENST00000324862 TRAV3A0A0B4J244 114 aa12.27□□□□□ -0.44
PRPF3-201ENST00000324862 MARCH11A6NNE9 402 aa12.27□□□□□ -0.44
PRPF3-201ENST00000324862 IGKV1D-33P01593 117 aa12.27□□□□□ -0.44
PRPF3-201ENST00000324862 IGKV1-33P01594 117 aa12.27□□□□□ -0.44
PRPF3-201ENST00000324862 OR4S2Q8NH73 311 aa12.27□□□□□ -0.44
PRPF3-201ENST00000324862 GPR146Q96CH1 333 aa12.27□□□□□ -0.44
PRPF3-201ENST00000324862 R3HDM4Q96D70 268 aa12.27□□□□□ -0.44
PRPF3-201ENST00000324862 MALSU1Q96EH3 234 aa12.27□□□□□ -0.44
PRPF3-201ENST00000324862 ADTRPQ96IZ2 230 aa12.27□□□□□ -0.44
PRPF3-201ENST00000324862 A0A0B4J2A0 478 aa12.27□□□□□ -0.45
PRPF3-201ENST00000324862 HPRT1P00492 218 aa12.27□□□□□ -0.45
PRPF3-201ENST00000324862 APOA2P02652 100 aa12.27□□□□□ -0.45
PRPF3-201ENST00000324862 ST6GAL2Q96JF0 529 aa12.27□□□□□ -0.45
PRPF3-201ENST00000324862 HARBI1Q96MB7 349 aa12.27□□□□□ -0.45
PRPF3-201ENST00000324862 GSKIPQ9P0R6 139 aa12.27□□□□□ -0.45
PRPF3-201ENST00000324862 SHPKQ9UHJ6 478 aa12.27□□□□□ -0.45
PRPF3-201ENST00000324862 WASHC3Q9Y3C0 194 aa12.27□□□□□ -0.45
PRPF3-201ENST00000324862 SHOXO15266 292 aa12.26□□□□□ -0.45
PRPF3-201ENST00000324862 CD5LO43866 347 aa12.26□□□□□ -0.45
PRPF3-201ENST00000324862 CCNKO75909 580 aa12.26□□□□□ -0.45
PRPF3-201ENST00000324862 VENTXO95231 258 aa12.26□□□□□ -0.45
PRPF3-201ENST00000324862 SNRNP70P08621 437 aaKnown RBP12.26□□□□□ -0.45
PRPF3-201ENST00000324862 RTL8BQ17RB0 113 aa12.26□□□□□ -0.45
PRPF3-201ENST00000324862 NMSQ5H8A3 153 aa12.26□□□□□ -0.45
PRPF3-201ENST00000324862 RNASE11Q8TAA1 199 aaKnown RBP12.26□□□□□ -0.45
PRPF3-201ENST00000324862 FLYWCH2Q96CP2 140 aaKnown RBP12.26□□□□□ -0.45
PRPF3-201ENST00000324862 RHOVQ96L33 236 aa12.26□□□□□ -0.45
PRPF3-201ENST00000324862 ZNF436Q9C0F3 470 aaPredicted RBP12.26□□□□□ -0.45
PRPF3-201ENST00000324862 RAB18Q9NP72 206 aa12.26□□□□□ -0.45
PRPF3-201ENST00000324862 TPSG1Q9NRR2 321 aa12.26□□□□□ -0.45
PRPF3-201ENST00000324862 FSHBP01225 129 aa12.26□□□□□ -0.45
PRPF3-201ENST00000324862 MYOD1P15172 320 aa12.26□□□□□ -0.45
PRPF3-201ENST00000324862 F2RL1P55085 397 aa12.26□□□□□ -0.45
PRPF3-201ENST00000324862 RPS16P62249 146 aaKnown RBP12.26□□□□□ -0.45
PRPF3-201ENST00000324862 HES1Q14469 280 aa12.26□□□□□ -0.45
PRPF3-201ENST00000324862 LRRC37A5PQ49AS3 106 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms