RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 C17orf51A8MQB3 221 aa8.49□□□□□ -1.05
COL12A1-201ENST00000322507 PSG5Q15238 335 aa8.49□□□□□ -1.05
COL12A1-201ENST00000322507 LRRC75BQ2VPJ9 315 aa8.49□□□□□ -1.05
COL12A1-201ENST00000322507 LILRA3Q8N6C8 439 aaPredicted RBP8.49□□□□□ -1.05
COL12A1-201ENST00000322507 ZNF479Q96JC4 524 aa8.49□□□□□ -1.05
COL12A1-201ENST00000322507 KIR2DL4Q99706 377 aa8.49□□□□□ -1.05
COL12A1-201ENST00000322507 SMOC1Q9H4F8 434 aa8.49□□□□□ -1.05
COL12A1-201ENST00000322507 K7ESF4 209 aa8.48□□□□□ -1.05
COL12A1-201ENST00000322507 MRPL24Q96A35 216 aaKnown RBP8.48□□□□□ -1.05
COL12A1-201ENST00000322507 TMEFF2Q9UIK5 374 aaPredicted RBP8.48□□□□□ -1.05
COL12A1-201ENST00000322507 PLPP3O14495 311 aa8.48□□□□□ -1.05
COL12A1-201ENST00000322507 PEX11BO96011 259 aa8.48□□□□□ -1.05
COL12A1-201ENST00000322507 HBBP68871 147 aa8.48□□□□□ -1.05
COL12A1-201ENST00000322507 GTF3AQ92664 365 aaKnown RBP8.48□□□□□ -1.05
COL12A1-201ENST00000322507 A0A1B0GWJ7 208 aa8.48□□□□□ -1.05
COL12A1-201ENST00000322507 LRRC75AQ8NAA5 344 aa8.48□□□□□ -1.05
COL12A1-201ENST00000322507 SMIM14Q96QK8 99 aa8.48□□□□□ -1.05
COL12A1-201ENST00000322507 DEFB127Q9H1M4 99 aa8.48□□□□□ -1.05
COL12A1-201ENST00000322507 ONECUT1Q9UBC0 465 aa8.48□□□□□ -1.05
COL12A1-201ENST00000322507 PTPRDP23468 1912 aa8.48□□□□□ -1.05
COL12A1-201ENST00000322507 MGPP08493 103 aa8.48□□□□□ -1.05
COL12A1-201ENST00000322507 HOXD3P31249 432 aaPredicted RBP8.48□□□□□ -1.05
COL12A1-201ENST00000322507 SPRED2Q7Z698 418 aa8.48□□□□□ -1.05
COL12A1-201ENST00000322507 GALNT14Q96FL9 552 aa8.48□□□□□ -1.05
COL12A1-201ENST00000322507 PRSS23O95084 383 aa8.48□□□□□ -1.05
COL12A1-201ENST00000322507 SRIP30626 198 aa8.48□□□□□ -1.05
COL12A1-201ENST00000322507 ERRFI1Q9UJM3 462 aaPredicted RBP8.48□□□□□ -1.05
COL12A1-201ENST00000322507 TRBV7-9A0A0J9YWB2 115 aa8.48□□□□□ -1.05
COL12A1-201ENST00000322507 CDKN1BP46527 198 aa8.48□□□□□ -1.05
COL12A1-201ENST00000322507 TMEM196Q5HYL7 178 aa8.48□□□□□ -1.05
COL12A1-201ENST00000322507 ASPHD2Q6ICH7 369 aa8.48□□□□□ -1.05
COL12A1-201ENST00000322507 TMEM179BQ7Z7N9 219 aa8.48□□□□□ -1.05
COL12A1-201ENST00000322507 QTRT1Q9BXR0 403 aaKnown RBP8.48□□□□□ -1.05
COL12A1-201ENST00000322507 CHST5Q9GZS9 411 aa8.48□□□□□ -1.05
COL12A1-201ENST00000322507 RAMP3O60896 148 aa8.48□□□□□ -1.05
COL12A1-201ENST00000322507 AGAP20933 346 aa8.48□□□□□ -1.05
COL12A1-201ENST00000322507 ERVK11-1P61568 191 aa8.48□□□□□ -1.05
COL12A1-201ENST00000322507 SLC25A35Q3KQZ1 300 aa8.48□□□□□ -1.05
COL12A1-201ENST00000322507 SPANXN1Q5VSR9 72 aa8.48□□□□□ -1.05
COL12A1-201ENST00000322507 RASL11BQ9BPW5 248 aa8.48□□□□□ -1.05
COL12A1-201ENST00000322507 ZG16BQ96DA0 208 aa8.48□□□□□ -1.05
COL12A1-201ENST00000322507 TM4SF19Q96DZ7 209 aa8.48□□□□□ -1.05
COL12A1-201ENST00000322507 HOXA5P20719 270 aa8.48□□□□□ -1.05
COL12A1-201ENST00000322507 IBA57Q5T440 356 aaKnown RBP8.48□□□□□ -1.05
COL12A1-201ENST00000322507 C20orf173Q96LM9 149 aa8.48□□□□□ -1.05
COL12A1-201ENST00000322507 PPIAL4DF5H284 164 aa8.47□□□□□ -1.05
COL12A1-201ENST00000322507 ZNF585BQ52M93 769 aa8.47□□□□□ -1.05
COL12A1-201ENST00000322507 ATOH7Q8N100 152 aa8.47□□□□□ -1.05
COL12A1-201ENST00000322507 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.47□□□□□ -1.05
COL12A1-201ENST00000322507 IGHV4-39P01824 125 aa8.47□□□□□ -1.05
COL12A1-201ENST00000322507 ASPDHA6ND91 283 aa8.47□□□□□ -1.05
COL12A1-201ENST00000322507 ID1P41134 155 aa8.47□□□□□ -1.05
COL12A1-201ENST00000322507 GPR132Q9UNW8 380 aa8.47□□□□□ -1.05
COL12A1-201ENST00000322507 NEUROG3Q9Y4Z2 214 aa8.47□□□□□ -1.05
COL12A1-201ENST00000322507 GABRG2P18507 467 aa8.47□□□□□ -1.05
COL12A1-201ENST00000322507 SELENOTP62341 195 aa8.47□□□□□ -1.05
COL12A1-201ENST00000322507 GNRHR2Q96P88 292 aa8.47□□□□□ -1.05
COL12A1-201ENST00000322507 TET1Q8NFU7 2136 aa8.47□□□□□ -1.05
COL12A1-201ENST00000322507 TRAV41A0A0B4J266 112 aa8.47□□□□□ -1.05
COL12A1-201ENST00000322507 TNFAIP6P98066 277 aaPredicted RBP8.47□□□□□ -1.05
COL12A1-201ENST00000322507 ZNF117Q03924 483 aa8.47□□□□□ -1.05
COL12A1-201ENST00000322507 MRGPREQ86SM8 312 aa8.47□□□□□ -1.05
COL12A1-201ENST00000322507 TUBA4BQ9H853 241 aa8.47□□□□□ -1.05
COL12A1-201ENST00000322507 SHISA7A6NL88 538 aa8.47□□□□□ -1.05
COL12A1-201ENST00000322507 GDF9O60383 454 aa8.47□□□□□ -1.05
COL12A1-201ENST00000322507 CTSVO60911 334 aa8.47□□□□□ -1.05
COL12A1-201ENST00000322507 DUSP2Q05923 314 aa8.47□□□□□ -1.05
COL12A1-201ENST00000322507 LHX8Q68G74 356 aa8.47□□□□□ -1.05
COL12A1-201ENST00000322507 LYG1Q8N1E2 194 aa8.47□□□□□ -1.05
COL12A1-201ENST00000322507 OR11G2Q8NGC1 345 aa8.47□□□□□ -1.05
COL12A1-201ENST00000322507 MISP3Q96FF7 219 aa8.47□□□□□ -1.05
COL12A1-201ENST00000322507 TMEM30AQ9NV96 361 aa8.47□□□□□ -1.05
COL12A1-201ENST00000322507 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.47□□□□□ -1.05
COL12A1-201ENST00000322507 K7N7A8 449 aa8.47□□□□□ -1.05
COL12A1-201ENST00000322507 SLAQ13239 276 aa8.47□□□□□ -1.05
COL12A1-201ENST00000322507 C1orf53Q5VUE5 145 aa8.47□□□□□ -1.05
COL12A1-201ENST00000322507 STPG3Q8N7X2 389 aa8.47□□□□□ -1.05
COL12A1-201ENST00000322507 HIST1H2BAQ96A08 127 aa8.47□□□□□ -1.05
COL12A1-201ENST00000322507 CARHSP1Q9Y2V2 147 aaKnown RBP8.47□□□□□ -1.05
COL12A1-201ENST00000322507 CDK2AP2O75956 126 aa8.47□□□□□ -1.05
COL12A1-201ENST00000322507 LYPD8Q6UX82 237 aa8.47□□□□□ -1.05
COL12A1-201ENST00000322507 GLCCI1Q86VQ1 547 aa8.47□□□□□ -1.05
COL12A1-201ENST00000322507 WNK1Q9H4A3 2382 aa8.47□□□□□ -1.05
COL12A1-201ENST00000322507 DNASE2O00115 360 aaPredicted RBP8.47□□□□□ -1.05
COL12A1-201ENST00000322507 C14orf144Q96I85 54 aa8.47□□□□□ -1.05
COL12A1-201ENST00000322507 CD160O95971 181 aa8.46□□□□□ -1.05
COL12A1-201ENST00000322507 MPLP40238 635 aa8.46□□□□□ -1.05
COL12A1-201ENST00000322507 DLX6P56179 175 aa8.46□□□□□ -1.05
COL12A1-201ENST00000322507 ZNF441Q8N8Z8 693 aa8.46□□□□□ -1.05
COL12A1-201ENST00000322507 OR1B1Q8NGR6 318 aa8.46□□□□□ -1.05
COL12A1-201ENST00000322507 DSPPQ9NZW4 1301 aa8.46□□□□□ -1.05
COL12A1-201ENST00000322507 RBM3P98179 157 aaKnown RBP8.46□□□□□ -1.05
COL12A1-201ENST00000322507 RNF166Q96A37 237 aaPredicted RBP8.46□□□□□ -1.05
COL12A1-201ENST00000322507 SSBP3Q9BWW4 388 aaPredicted RBP8.46□□□□□ -1.05
COL12A1-201ENST00000322507 IGHV3-20A0A0C4DH32 117 aa8.46□□□□□ -1.05
COL12A1-201ENST00000322507 SFTPA2Q8IWL1 248 aa8.46□□□□□ -1.05
COL12A1-201ENST00000322507 SFTPA1Q8IWL2 248 aa8.46□□□□□ -1.05
COL12A1-201ENST00000322507 TP53I13Q8NBR0 393 aaPredicted RBP8.46□□□□□ -1.05
COL12A1-201ENST00000322507 H0Y8X5 98 aa8.46□□□□□ -1.05
COL12A1-201ENST00000322507 PPDPFLQ8WWR9 84 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms