RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 M0R1X1 148 aa18.54■□□□□ 0.56
PNKP-201ENST00000322344 SPRY3O43610 288 aa18.54■□□□□ 0.56
PNKP-201ENST00000322344 SOX15O60248 233 aa18.54■□□□□ 0.56
PNKP-201ENST00000322344 CYB5R3P00387 301 aaPredicted RBP18.54■□□□□ 0.56
PNKP-201ENST00000322344 OR9G9P0C7N8 305 aa18.54■□□□□ 0.56
PNKP-201ENST00000322344 SMIM6P0DI80 62 aa18.54■□□□□ 0.56
PNKP-201ENST00000322344 RAB7AP51149 207 aa18.54■□□□□ 0.56
PNKP-201ENST00000322344 SELENOVP59797 346 aa18.54■□□□□ 0.56
PNKP-201ENST00000322344 SPCS3P61009 180 aa18.54■□□□□ 0.56
PNKP-201ENST00000322344 ERVK-16P61578 105 aa18.54■□□□□ 0.56
PNKP-201ENST00000322344 FFAR4Q5NUL3 377 aa18.54■□□□□ 0.56
PNKP-201ENST00000322344 CALYQ9NYX4 217 aa18.54■□□□□ 0.56
PNKP-201ENST00000322344 CELSR3Q9NYQ7 3312 aa18.54■□□□□ 0.56
PNKP-201ENST00000322344 OTOGLQ3ZCN5 2332 aa18.54■□□□□ 0.56
PNKP-201ENST00000322344 PSMB3P49720 205 aa18.54■□□□□ 0.56
PNKP-201ENST00000322344 EDDM3BP56851 147 aa18.54■□□□□ 0.56
PNKP-201ENST00000322344 MEF2BQ02080 365 aaPredicted RBP18.54■□□□□ 0.56
PNKP-201ENST00000322344 PRAMEF5Q5TYX0 476 aa18.54■□□□□ 0.56
PNKP-201ENST00000322344 OR4A16Q8NH70 328 aa18.54■□□□□ 0.56
PNKP-201ENST00000322344 FAM222BQ8WU58 562 aa18.54■□□□□ 0.56
PNKP-201ENST00000322344 IFI27L2Q9H2X8 130 aa18.54■□□□□ 0.56
PNKP-201ENST00000322344 MANBALQ9NQG1 85 aa18.54■□□□□ 0.56
PNKP-201ENST00000322344 URB1O60287 2271 aaKnown RBP18.53■□□□□ 0.56
PNKP-201ENST00000322344 C15orf62A8K5M9 175 aa18.53■□□□□ 0.56
PNKP-201ENST00000322344 S100A9P06702 114 aaKnown RBP18.53■□□□□ 0.56
PNKP-201ENST00000322344 CEACAM8P31997 349 aaPredicted RBP18.53■□□□□ 0.56
PNKP-201ENST00000322344 ZNRF1Q8ND25 227 aa18.53■□□□□ 0.56
PNKP-201ENST00000322344 CHD3Q12873 2000 aaKnown RBP18.53■□□□□ 0.56
PNKP-201ENST00000322344 CGB3P0DN86 165 aa18.52■□□□□ 0.56
PNKP-201ENST00000322344 CGB7P0DN87 165 aa18.52■□□□□ 0.56
PNKP-201ENST00000322344 S100A12P80511 92 aa18.52■□□□□ 0.56
PNKP-201ENST00000322344 TFF3Q07654 80 aa18.52■□□□□ 0.56
PNKP-201ENST00000322344 PDLIM3Q53GG5 364 aaPredicted RBP18.52■□□□□ 0.56
PNKP-201ENST00000322344 SPRNQ5BIV9 151 aa18.52■□□□□ 0.56
PNKP-201ENST00000322344 VHLLQ6RSH7 139 aa18.52■□□□□ 0.56
PNKP-201ENST00000322344 RPRMLQ8N4K4 120 aa18.52■□□□□ 0.56
PNKP-201ENST00000322344 S1PR3Q99500 378 aa18.52■□□□□ 0.56
PNKP-201ENST00000322344 ZNF251Q9BRH9 671 aa18.52■□□□□ 0.56
PNKP-201ENST00000322344 SLC25A22Q9H936 323 aa18.52■□□□□ 0.56
PNKP-201ENST00000322344 INTS1Q8N201 2190 aaKnown RBP18.52■□□□□ 0.56
PNKP-201ENST00000322344 CLDN34H7C241 214 aa18.52■□□□□ 0.55
PNKP-201ENST00000322344 CYB5BO43169 146 aa18.52■□□□□ 0.55
PNKP-201ENST00000322344 NQO2P16083 231 aa18.52■□□□□ 0.55
PNKP-201ENST00000322344 RND2P52198 227 aa18.52■□□□□ 0.55
PNKP-201ENST00000322344 ERVFRD-1P60508 538 aa18.52■□□□□ 0.55
PNKP-201ENST00000322344 KRTCAP3Q53RY4 240 aa18.52■□□□□ 0.55
PNKP-201ENST00000322344 ZNF343Q6P1L6 599 aa18.52■□□□□ 0.55
PNKP-201ENST00000322344 CTDSP1Q9GZU7 261 aa18.52■□□□□ 0.55
PNKP-201ENST00000322344 RNF7Q9UBF6 113 aa18.52■□□□□ 0.55
PNKP-201ENST00000322344 TMEM250H0YL14 139 aa18.51■□□□□ 0.55
PNKP-201ENST00000322344 CXCL1P09341 107 aa18.51■□□□□ 0.55
PNKP-201ENST00000322344 CD81P60033 236 aa18.51■□□□□ 0.55
PNKP-201ENST00000322344 ACOT6Q3I5F7 207 aaPredicted RBP18.51■□□□□ 0.55
PNKP-201ENST00000322344 SPINK9Q5DT21 86 aa18.51■□□□□ 0.55
PNKP-201ENST00000322344 WDR25Q64LD2 544 aaPredicted RBP18.51■□□□□ 0.55
PNKP-201ENST00000322344 RBMXL3Q8N7X1 1067 aaKnown RBP18.51■□□□□ 0.55
PNKP-201ENST00000322344 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.51■□□□□ 0.55
PNKP-201ENST00000322344 SDSLQ96GA7 329 aa18.51■□□□□ 0.55
PNKP-201ENST00000322344 GGACTQ9BVM4 153 aa18.51■□□□□ 0.55
PNKP-201ENST00000322344 NAT8Q9UHE5 227 aa18.51■□□□□ 0.55
PNKP-201ENST00000322344 WDR83OSQ9Y284 106 aa18.51■□□□□ 0.55
PNKP-201ENST00000322344 ATXN7O15265 892 aaPredicted RBP18.5■□□□□ 0.55
PNKP-201ENST00000322344 TGOLN2O43493 480 aa18.5■□□□□ 0.55
PNKP-201ENST00000322344 KIAA0141Q14154 515 aaPredicted RBP18.5■□□□□ 0.55
PNKP-201ENST00000322344 ZNF674Q2M3X9 581 aa18.5■□□□□ 0.55
PNKP-201ENST00000322344 OR13D1Q8NGV5 346 aa18.5■□□□□ 0.55
PNKP-201ENST00000322344 FAM57AQ8TBR7 257 aa18.5■□□□□ 0.55
PNKP-201ENST00000322344 DIRC2Q96SL1 478 aa18.5■□□□□ 0.55
PNKP-201ENST00000322344 IL19Q9UHD0 177 aa18.5■□□□□ 0.55
PNKP-201ENST00000322344 CACNA1HO95180 2353 aa18.5■□□□□ 0.55
PNKP-201ENST00000322344 ZNF134P52741 427 aa18.5■□□□□ 0.55
PNKP-201ENST00000322344 RPL39P5Q59GN2 51 aa18.5■□□□□ 0.55
PNKP-201ENST00000322344 C1orf87Q8N0U7 546 aa18.5■□□□□ 0.55
PNKP-201ENST00000322344 OR4S2Q8NH73 311 aa18.5■□□□□ 0.55
PNKP-201ENST00000322344 PLPPR2Q96GM1 343 aa18.5■□□□□ 0.55
PNKP-201ENST00000322344 GFOD1Q9NXC2 390 aa18.5■□□□□ 0.55
PNKP-201ENST00000322344 URGCP-MRPS24S4R325 110 aa18.5■□□□□ 0.55
PNKP-201ENST00000322344 MPDU1O75352 247 aa18.49■□□□□ 0.55
PNKP-201ENST00000322344 CD1BP29016 333 aa18.49■□□□□ 0.55
PNKP-201ENST00000322344 HNF4GQ14541 408 aa18.49■□□□□ 0.55
PNKP-201ENST00000322344 C17orf58Q2M2W7 97 aa18.49■□□□□ 0.55
PNKP-201ENST00000322344 CYP2G1PQ6ZSU1 146 aa18.49■□□□□ 0.55
PNKP-201ENST00000322344 DDB2Q92466 427 aa18.49■□□□□ 0.55
PNKP-201ENST00000322344 KBTBD11-OT1A0A1B0GTJ5 212 aa18.49■□□□□ 0.55
PNKP-201ENST00000322344 KBTBD11O94819 623 aa18.49■□□□□ 0.55
PNKP-201ENST00000322344 TNFSF4P23510 183 aa18.49■□□□□ 0.55
PNKP-201ENST00000322344 RPS16P62249 146 aaKnown RBP18.49■□□□□ 0.55
PNKP-201ENST00000322344 TNFAIP6P98066 277 aaPredicted RBP18.49■□□□□ 0.55
PNKP-201ENST00000322344 Q8TCH9 128 aa18.49■□□□□ 0.55
PNKP-201ENST00000322344 RAB24Q969Q5 203 aa18.49■□□□□ 0.55
PNKP-201ENST00000322344 SMIM7Q9BQ49 75 aa18.49■□□□□ 0.55
PNKP-201ENST00000322344 TGIF2-C20orf24A0A0A6YYL0 155 aa18.48■□□□□ 0.55
PNKP-201ENST00000322344 RELBQ01201 579 aa18.48■□□□□ 0.55
PNKP-201ENST00000322344 TMEM30BQ3MIR4 351 aa18.48■□□□□ 0.55
PNKP-201ENST00000322344 STUMQ69YW2 141 aa18.48■□□□□ 0.55
PNKP-201ENST00000322344 SSX9Q7RTT3 188 aa18.48■□□□□ 0.55
PNKP-201ENST00000322344 FAM234AQ9H0X4 552 aa18.48■□□□□ 0.55
PNKP-201ENST00000322344 TRGV10A0A0A0MS01 117 aa18.47■□□□□ 0.55
PNKP-201ENST00000322344 A8MXE2 369 aa18.47■□□□□ 0.55
PNKP-201ENST00000322344 IFNA10P01566 189 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms