RNA–Protein interactions for RNA: ENST00000318787.13

HDDC2-201, Transcript of HD domain containing 2, humanhuman

TSL 1 (best)

Gene HDDC2, Length 1,350 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-201ENST00000318787 RNF152Q8N8N0 203 aa12.53□□□□□ -0.4
HDDC2-201ENST00000318787 OR5M8Q8NGP6 311 aa12.53□□□□□ -0.4
HDDC2-201ENST00000318787 S100A16Q96FQ6 103 aaKnown RBP12.53□□□□□ -0.4
HDDC2-201ENST00000318787 ADTRPQ96IZ2 230 aa12.53□□□□□ -0.4
HDDC2-201ENST00000318787 MCRIP2Q9BUT9 160 aaKnown RBP12.53□□□□□ -0.4
HDDC2-201ENST00000318787 GPR61Q9BZJ8 451 aa12.53□□□□□ -0.4
HDDC2-201ENST00000318787 IFT46Q9NQC8 304 aa12.53□□□□□ -0.4
HDDC2-201ENST00000318787 VSIG4Q9Y279 399 aa12.53□□□□□ -0.4
HDDC2-201ENST00000318787 IGKV1D-13A0A0B4J2D9 117 aa12.52□□□□□ -0.41
HDDC2-201ENST00000318787 SOX15O60248 233 aa12.52□□□□□ -0.41
HDDC2-201ENST00000318787 FCGR3BO75015 233 aa12.52□□□□□ -0.41
HDDC2-201ENST00000318787 IGLV1-40P01703 118 aa12.52□□□□□ -0.41
HDDC2-201ENST00000318787 APELAP0DMC3 54 aa12.52□□□□□ -0.41
HDDC2-201ENST00000318787 IGKV1-13P0DP09 117 aa12.52□□□□□ -0.41
HDDC2-201ENST00000318787 RRASP10301 218 aa12.52□□□□□ -0.41
HDDC2-201ENST00000318787 CD40LGP29965 261 aa12.52□□□□□ -0.41
HDDC2-201ENST00000318787 TPPP2P59282 170 aa12.52□□□□□ -0.41
HDDC2-201ENST00000318787 PJVKQ0ZLH3 352 aa12.52□□□□□ -0.41
HDDC2-201ENST00000318787 TMEM69Q5SWH9 247 aa12.52□□□□□ -0.41
HDDC2-201ENST00000318787 ZNF562Q6V9R5 426 aa12.52□□□□□ -0.41
HDDC2-201ENST00000318787 IDO2Q6ZQW0 420 aa12.52□□□□□ -0.41
HDDC2-201ENST00000318787 ZNF491Q8N8L2 437 aa12.52□□□□□ -0.41
HDDC2-201ENST00000318787 MINDY2Q8NBR6 621 aa12.52□□□□□ -0.41
HDDC2-201ENST00000318787 SECTM1Q8WVN6 248 aa12.52□□□□□ -0.41
HDDC2-201ENST00000318787 UBE2E2Q96LR5 201 aa12.52□□□□□ -0.41
HDDC2-201ENST00000318787 PHB2Q99623 299 aa12.52□□□□□ -0.41
HDDC2-201ENST00000318787 ALX4Q9H161 411 aaPredicted RBP12.52□□□□□ -0.41
HDDC2-201ENST00000318787 AUNIPQ9H7T9 357 aa12.52□□□□□ -0.41
HDDC2-201ENST00000318787 A0A0A6YYH2 397 aa12.51□□□□□ -0.41
HDDC2-201ENST00000318787 A6NJ64 397 aa12.51□□□□□ -0.41
HDDC2-201ENST00000318787 IGLV2-23P01705 113 aa12.51□□□□□ -0.41
HDDC2-201ENST00000318787 IGHV3-11P01762 117 aa12.51□□□□□ -0.41
HDDC2-201ENST00000318787 EGR2P11161 476 aaPredicted RBP12.51□□□□□ -0.41
HDDC2-201ENST00000318787 LGALS7P47929 136 aa12.51□□□□□ -0.41
HDDC2-201ENST00000318787 FXYD4P59646 89 aa12.51□□□□□ -0.41
HDDC2-201ENST00000318787 TAGLNQ01995 201 aaKnown RBP12.51□□□□□ -0.41
HDDC2-201ENST00000318787 VMA21Q3ZAQ7 101 aa12.51□□□□□ -0.41
HDDC2-201ENST00000318787 TCTEX1D1Q8N7M0 179 aa12.51□□□□□ -0.41
HDDC2-201ENST00000318787 TCTEX1D2Q8WW35 142 aa12.51□□□□□ -0.41
HDDC2-201ENST00000318787 ACOT12Q8WYK0 555 aa12.51□□□□□ -0.41
HDDC2-201ENST00000318787 TAS2R8Q9NYW2 309 aa12.51□□□□□ -0.41
HDDC2-201ENST00000318787 COMMD3Q9UBI1 195 aa12.51□□□□□ -0.41
HDDC2-201ENST00000318787 NUBP2Q9Y5Y2 271 aa12.51□□□□□ -0.41
HDDC2-201ENST00000318787 ARPC1BO15143 372 aaKnown RBP12.5□□□□□ -0.41
HDDC2-201ENST00000318787 TNFSF12O43508 249 aa12.5□□□□□ -0.41
HDDC2-201ENST00000318787 HLA-DQB1P01920 261 aa12.5□□□□□ -0.41
HDDC2-201ENST00000318787 FCGR2CP31995 323 aa12.5□□□□□ -0.41
HDDC2-201ENST00000318787 KRTAP10-11P60412 298 aa12.5□□□□□ -0.41
HDDC2-201ENST00000318787 TNXAQ16473 311 aa12.5□□□□□ -0.41
HDDC2-201ENST00000318787 TMEM177Q53S58 311 aa12.5□□□□□ -0.41
HDDC2-201ENST00000318787 DEFB121Q5J5C9 76 aa12.5□□□□□ -0.41
HDDC2-201ENST00000318787 HOGA1Q86XE5 327 aa12.5□□□□□ -0.41
HDDC2-201ENST00000318787 OR5T1Q8NG75 326 aa12.5□□□□□ -0.41
HDDC2-201ENST00000318787 OR1N2Q8NGR9 330 aa12.5□□□□□ -0.41
HDDC2-201ENST00000318787 GPHA2Q96T91 129 aa12.5□□□□□ -0.41
HDDC2-201ENST00000318787 MRPS7Q9Y2R9 242 aaKnown RBP12.5□□□□□ -0.41
HDDC2-201ENST00000318787 RBMX2Q9Y388 322 aaKnown RBP12.5□□□□□ -0.41
HDDC2-201ENST00000318787 PRELID3BQ9Y3B1 194 aa12.5□□□□□ -0.41
HDDC2-201ENST00000318787 SRRM4A7MD48 611 aaKnown RBP12.49□□□□□ -0.41
HDDC2-201ENST00000318787 XRCC3O43542 346 aa12.49□□□□□ -0.41
HDDC2-201ENST00000318787 TMEM127O75204 238 aa12.49□□□□□ -0.41
HDDC2-201ENST00000318787 TRGV3P03979 118 aa12.49□□□□□ -0.41
HDDC2-201ENST00000318787 AADACP22760 399 aa12.49□□□□□ -0.41
HDDC2-201ENST00000318787 ZNF616Q08AN1 781 aa12.49□□□□□ -0.41
HDDC2-201ENST00000318787 AKIRIN2Q53H80 203 aa12.49□□□□□ -0.41
HDDC2-201ENST00000318787 PYHIN1Q6K0P9 492 aa12.49□□□□□ -0.41
HDDC2-201ENST00000318787 OR13F1Q8NGS4 319 aa12.49□□□□□ -0.41
HDDC2-201ENST00000318787 MYOZ3Q8TDC0 251 aa12.49□□□□□ -0.41
HDDC2-201ENST00000318787 DDB2Q92466 427 aa12.49□□□□□ -0.41
HDDC2-201ENST00000318787 SLC25A46Q96AG3 418 aa12.49□□□□□ -0.41
HDDC2-201ENST00000318787 SEC14L6B5MCN3 397 aa12.48□□□□□ -0.41
HDDC2-201ENST00000318787 I3L521 148 aa12.48□□□□□ -0.41
HDDC2-201ENST00000318787 MPPED1O15442 326 aa12.48□□□□□ -0.41
HDDC2-201ENST00000318787 SLC22A5O76082 557 aa12.48□□□□□ -0.41
HDDC2-201ENST00000318787 OR8U8P0C7N1 319 aa12.48□□□□□ -0.41
HDDC2-201ENST00000318787 CBX5P45973 191 aa12.48□□□□□ -0.41
HDDC2-201ENST00000318787 CRIP2P52943 208 aaPredicted RBP12.48□□□□□ -0.41
HDDC2-201ENST00000318787 TAS2R20P59543 309 aa12.48□□□□□ -0.41
HDDC2-201ENST00000318787 RPL30P62888 115 aaKnown RBP12.48□□□□□ -0.41
HDDC2-201ENST00000318787 DEFA5Q01523 94 aa12.48□□□□□ -0.41
HDDC2-201ENST00000318787 KIAA0141Q14154 515 aaPredicted RBP12.48□□□□□ -0.41
HDDC2-201ENST00000318787 C19orf54Q5BKX5 351 aa12.48□□□□□ -0.41
HDDC2-201ENST00000318787 TMEM17Q86X19 198 aa12.48□□□□□ -0.41
HDDC2-201ENST00000318787 NAA50Q9GZZ1 169 aaKnown RBP12.48□□□□□ -0.41
HDDC2-201ENST00000318787 CCL28Q9NRJ3 127 aa12.48□□□□□ -0.41
HDDC2-201ENST00000318787 WI2-2373I1.2A0A1W2PRP0 233 aa12.47□□□□□ -0.41
HDDC2-201ENST00000318787 TRIM64CA6NLI5 447 aa12.47□□□□□ -0.41
HDDC2-201ENST00000318787 ACTL6BO94805 426 aa12.47□□□□□ -0.41
HDDC2-201ENST00000318787 EIF4EP06730 217 aaKnown RBP12.47□□□□□ -0.41
HDDC2-201ENST00000318787 SAA1P0DJI8 122 aaPredicted RBP12.47□□□□□ -0.41
HDDC2-201ENST00000318787 SMIM18P0DKX4 95 aa12.47□□□□□ -0.41
HDDC2-201ENST00000318787 C9orf66Q5T8R8 295 aa12.47□□□□□ -0.41
HDDC2-201ENST00000318787 VKORC1L1Q8N0U8 176 aa12.47□□□□□ -0.41
HDDC2-201ENST00000318787 OSR1Q8TAX0 266 aaPredicted RBP12.47□□□□□ -0.41
HDDC2-201ENST00000318787 SNAPC3Q92966 411 aa12.47□□□□□ -0.41
HDDC2-201ENST00000318787 HSD17B10Q99714 261 aaKnown RBP12.47□□□□□ -0.41
HDDC2-201ENST00000318787 SLC5A7Q9GZV3 580 aa12.47□□□□□ -0.41
HDDC2-201ENST00000318787 COA4Q9NYJ1 87 aa12.47□□□□□ -0.41
HDDC2-201ENST00000318787 EHFQ9NZC4 300 aa12.47□□□□□ -0.41
HDDC2-201ENST00000318787 K7EIL1 84 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms