RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 IGHV1-69-2A0A0G2JMI3 117 aa15.1■□□□□ 0.01
CCDC43-201ENST00000315286 RBFOX2O43251 390 aaKnown RBP eCLIP15.1■□□□□ 0.01
CCDC43-201ENST00000315286 RBMXL2O75526 392 aaKnown RBP15.1■□□□□ 0.01
CCDC43-201ENST00000315286 TSPAN15O95858 294 aa15.1■□□□□ 0.01
CCDC43-201ENST00000315286 OR9G9P0C7N8 305 aa15.1■□□□□ 0.01
CCDC43-201ENST00000315286 ADCYAP1P18509 176 aa15.1■□□□□ 0.01
CCDC43-201ENST00000315286 MRPS11P82912 194 aaKnown RBP15.1■□□□□ 0.01
CCDC43-201ENST00000315286 MEF2CQ06413 473 aaPredicted RBP15.1■□□□□ 0.01
CCDC43-201ENST00000315286 ATRAIDQ6UW56 229 aa15.1■□□□□ 0.01
CCDC43-201ENST00000315286 MUC15Q8N387 334 aa15.1■□□□□ 0.01
CCDC43-201ENST00000315286 ZDHHC16Q969W1 377 aa15.1■□□□□ 0.01
CCDC43-201ENST00000315286 GNPNAT1Q96EK6 184 aaPredicted RBP15.1■□□□□ 0.01
CCDC43-201ENST00000315286 UQCC1Q9NVA1 299 aa15.1■□□□□ 0.01
CCDC43-201ENST00000315286 TRIM77I1YAP6 450 aa15.1■□□□□ 0.01
CCDC43-201ENST00000315286 DEFA5Q01523 94 aa15.1■□□□□ 0.01
CCDC43-201ENST00000315286 TMEM200BQ69YZ2 307 aa15.1■□□□□ 0.01
CCDC43-201ENST00000315286 TMEM14EPQ6UXP3 125 aa15.1■□□□□ 0.01
CCDC43-201ENST00000315286 SSX9Q7RTT3 188 aa15.1■□□□□ 0.01
CCDC43-201ENST00000315286 VKORC1L1Q8N0U8 176 aa15.1■□□□□ 0.01
CCDC43-201ENST00000315286 ZNF525Q8N782 197 aa15.1■□□□□ 0.01
CCDC43-201ENST00000315286 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.1■□□□□ 0.01
CCDC43-201ENST00000315286 FAM213BQ8TBF2 198 aa15.1■□□□□ 0.01
CCDC43-201ENST00000315286 LRRC46Q96FV0 321 aa15.1■□□□□ 0.01
CCDC43-201ENST00000315286 CTSZQ9UBR2 303 aa15.1■□□□□ 0.01
CCDC43-201ENST00000315286 LRBAP50851 2863 aa15.09■□□□□ 0.01
CCDC43-201ENST00000315286 RNASEK-C17orf49H0YIS7 233 aa15.09■□□□□ 0.01
CCDC43-201ENST00000315286 NDUFB3O43676 98 aa15.09■□□□□ 0.01
CCDC43-201ENST00000315286 ZG16O60844 167 aa15.09■□□□□ 0.01
CCDC43-201ENST00000315286 IFNA5P01569 189 aa15.09■□□□□ 0.01
CCDC43-201ENST00000315286 SFTPCP11686 197 aa15.09■□□□□ 0.01
CCDC43-201ENST00000315286 CCL3L1P16619 93 aa15.09■□□□□ 0.01
CCDC43-201ENST00000315286 TMEM30BQ3MIR4 351 aa15.09■□□□□ 0.01
CCDC43-201ENST00000315286 SPINK9Q5DT21 86 aa15.09■□□□□ 0.01
CCDC43-201ENST00000315286 QTRT1Q9BXR0 403 aaKnown RBP15.09■□□□□ 0.01
CCDC43-201ENST00000315286 CACNA1AO00555 2505 aa15.09■□□□□ 0.01
CCDC43-201ENST00000315286 HIVEP3Q5T1R4 2406 aa15.09■□□□□ 0.01
CCDC43-201ENST00000315286 UMAD1C9J7I0 102 aa15.08■□□□□ 0.01
CCDC43-201ENST00000315286 HBG1P69891 147 aa15.08■□□□□ 0.01
CCDC43-201ENST00000315286 HBG2P69892 147 aa15.08■□□□□ 0.01
CCDC43-201ENST00000315286 ZNF672Q499Z4 452 aaPredicted RBP15.08■□□□□ 0.01
CCDC43-201ENST00000315286 THNSL2Q86YJ6 484 aa15.08■□□□□ 0.01
CCDC43-201ENST00000315286 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.08■□□□□ 0.01
CCDC43-201ENST00000315286 DTD1Q8TEA8 209 aa15.08■□□□□ 0.01
CCDC43-201ENST00000315286 H1FXQ92522 213 aaKnown RBP15.08■□□□□ 0.01
CCDC43-201ENST00000315286 OR4C12Q96R67 309 aa15.08■□□□□ 0.01
CCDC43-201ENST00000315286 GAL3ST2Q9H3Q3 398 aa15.08■□□□□ 0.01
CCDC43-201ENST00000315286 ZNRD1Q9P1U0 126 aa15.08■□□□□ 0.01
CCDC43-201ENST00000315286 DVL1O14640 695 aa15.08■□□□□ 0
CCDC43-201ENST00000315286 CD5P06127 495 aa15.08■□□□□ 0
CCDC43-201ENST00000315286 LOXP28300 417 aaPredicted RBP15.08■□□□□ 0
CCDC43-201ENST00000315286 SNCAP37840 140 aa15.08■□□□□ 0
CCDC43-201ENST00000315286 KIR2DS2P43631 304 aa15.08■□□□□ 0
CCDC43-201ENST00000315286 OR2B8PP59922 312 aa15.08■□□□□ 0
CCDC43-201ENST00000315286 BTN1A1Q13410 526 aa15.08■□□□□ 0
CCDC43-201ENST00000315286 LRRC10Q5BKY1 277 aa15.08■□□□□ 0
CCDC43-201ENST00000315286 SLC25A24Q6NUK1 477 aa15.08■□□□□ 0
CCDC43-201ENST00000315286 SLC25A48Q6ZT89 311 aaKnown RBP15.08■□□□□ 0
CCDC43-201ENST00000315286 ZNF383Q8NA42 475 aa15.08■□□□□ 0
CCDC43-201ENST00000315286 SPTBN1Q01082 2364 aaKnown RBP15.08■□□□□ 0
CCDC43-201ENST00000315286 M6PRP20645 277 aa15.07■□□□□ 0
CCDC43-201ENST00000315286 OR8G2PQ6IF36 304 aa15.07■□□□□ 0
CCDC43-201ENST00000315286 SUN5Q8TC36 379 aa15.07■□□□□ 0
CCDC43-201ENST00000315286 RBMXL1Q96E39 390 aaKnown RBP15.07■□□□□ 0
CCDC43-201ENST00000315286 ZNF714Q96N38 554 aa15.07■□□□□ 0
CCDC43-201ENST00000315286 CEBPZOSA8MTT3 80 aa15.07■□□□□ 0
CCDC43-201ENST00000315286 C9JQL5 133 aa15.07■□□□□ 0
CCDC43-201ENST00000315286 F8W036 122 aa15.07■□□□□ 0
CCDC43-201ENST00000315286 LYNX1G3V0Z9 82 aa15.07■□□□□ 0
CCDC43-201ENST00000315286 LYNX1P0DP58 116 aa15.07■□□□□ 0
CCDC43-201ENST00000315286 NQO2P16083 231 aa15.07■□□□□ 0
CCDC43-201ENST00000315286 THBS3P49746 956 aa15.07■□□□□ 0
CCDC43-201ENST00000315286 TFF3Q07654 80 aa15.07■□□□□ 0
CCDC43-201ENST00000315286 HFEQ30201 348 aa15.07■□□□□ 0
CCDC43-201ENST00000315286 C10orf91Q5T1B1 145 aa15.07■□□□□ 0
CCDC43-201ENST00000315286 HEPN1Q6WQI6 88 aa15.07■□□□□ 0
CCDC43-201ENST00000315286 LILRB2Q8N423 598 aa15.07■□□□□ 0
CCDC43-201ENST00000315286 OR10A7Q8NGE5 316 aa15.07■□□□□ 0
CCDC43-201ENST00000315286 OR4S2Q8NH73 311 aa15.07■□□□□ 0
CCDC43-201ENST00000315286 KAAG1Q9UBP8 84 aa15.07■□□□□ 0
CCDC43-201ENST00000315286 FBXO7Q9Y3I1 522 aa15.07■□□□□ 0
CCDC43-201ENST00000315286 TET2Q6N021 2002 aaPredicted RBP15.07■□□□□ 0
CCDC43-201ENST00000315286 FAM90A9PA6NNJ1 464 aa15.06■□□□□ 0
CCDC43-201ENST00000315286 DVL1P1P54792 670 aaPredicted RBP15.06■□□□□ 0
CCDC43-201ENST00000315286 ERVK-16P61578 105 aa15.06■□□□□ 0
CCDC43-201ENST00000315286 SLC38A11Q08AI6 406 aa15.06■□□□□ 0
CCDC43-201ENST00000315286 SCGB1C1Q8TD33 95 aa15.06■□□□□ 0
CCDC43-201ENST00000315286 TMEM204Q9BSN7 226 aa15.06■□□□□ 0
CCDC43-201ENST00000315286 RSG1Q9BU20 258 aa15.06■□□□□ 0
CCDC43-201ENST00000315286 SCRT1Q9BWW7 348 aa15.06■□□□□ 0
CCDC43-201ENST00000315286 TRAV3A0A0B4J244 114 aa15.05■□□□□ 0
CCDC43-201ENST00000315286 A0A1B0GV50 99 aa15.05■□□□□ 0
CCDC43-201ENST00000315286 DAOP14920 347 aa15.05■□□□□ 0
CCDC43-201ENST00000315286 COL8A2P25067 703 aa15.05■□□□□ 0
CCDC43-201ENST00000315286 GUCA2BQ16661 112 aa15.05■□□□□ 0
CCDC43-201ENST00000315286 AARDQ4LEZ3 155 aa15.05■□□□□ 0
CCDC43-201ENST00000315286 OR4A16Q8NH70 328 aa15.05■□□□□ 0
CCDC43-201ENST00000315286 CIB3Q96Q77 187 aaPredicted RBP15.05■□□□□ 0
CCDC43-201ENST00000315286 PMS2P5A8MQ11 134 aa15.05■□□□□ -0
CCDC43-201ENST00000315286 IFNA17P01571 189 aa15.05■□□□□ -0
CCDC43-201ENST00000315286 LRRC75BQ2VPJ9 315 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms