RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 MANBALQ9NQG1 85 aa11.48□□□□□ -0.57
RFFL-201ENST00000315249 G6PC2Q9NQR9 355 aa11.48□□□□□ -0.57
RFFL-201ENST00000315249 LINC00869P0C866 280 aa11.48□□□□□ -0.57
RFFL-201ENST00000315249 SULT1A1P50225 295 aa11.48□□□□□ -0.57
RFFL-201ENST00000315249 WFIKKN1Q96NZ8 548 aa11.48□□□□□ -0.57
RFFL-201ENST00000315249 ELOVL1Q9BW60 279 aa11.48□□□□□ -0.57
RFFL-201ENST00000315249 NXF2Q9GZY0 626 aaKnown RBP11.48□□□□□ -0.57
RFFL-201ENST00000315249 IGHV3-66A0A0C4DH42 116 aa11.48□□□□□ -0.57
RFFL-201ENST00000315249 IGSF23A1L1A6 192 aa11.48□□□□□ -0.57
RFFL-201ENST00000315249 ZNF207O43670 478 aaKnown RBP11.48□□□□□ -0.57
RFFL-201ENST00000315249 IGF2P01344 180 aa11.48□□□□□ -0.57
RFFL-201ENST00000315249 FLVCR1-AS1Q8TAF5 88 aa11.48□□□□□ -0.57
RFFL-201ENST00000315249 TMPRSS5Q9H3S3 457 aa11.48□□□□□ -0.57
RFFL-201ENST00000315249 MMP26Q9NRE1 261 aa11.48□□□□□ -0.57
RFFL-201ENST00000315249 ICMTO60725 284 aa11.48□□□□□ -0.57
RFFL-201ENST00000315249 OR10J1P30954 320 aa11.48□□□□□ -0.57
RFFL-201ENST00000315249 FGFRL1Q8N441 504 aa11.48□□□□□ -0.57
RFFL-201ENST00000315249 TCTE3Q8IZS6 198 aa11.47□□□□□ -0.57
RFFL-201ENST00000315249 RAX2Q96IS3 184 aa11.47□□□□□ -0.57
RFFL-201ENST00000315249 MIXL1Q9H2W2 232 aa11.47□□□□□ -0.57
RFFL-201ENST00000315249 GTF3C1Q12789 2109 aa11.47□□□□□ -0.57
RFFL-201ENST00000315249 NOTCH3Q9UM47 2321 aa11.47□□□□□ -0.57
RFFL-201ENST00000315249 RND2P52198 227 aa11.47□□□□□ -0.57
RFFL-201ENST00000315249 LGALSLQ3ZCW2 172 aaPredicted RBP11.47□□□□□ -0.57
RFFL-201ENST00000315249 COLCA1Q6ZS62 124 aa11.47□□□□□ -0.57
RFFL-201ENST00000315249 TMEM37Q8WXS4 190 aa11.47□□□□□ -0.57
RFFL-201ENST00000315249 HELTA6NFD8 242 aa11.47□□□□□ -0.57
RFFL-201ENST00000315249 CXorf1O96002 111 aa11.47□□□□□ -0.57
RFFL-201ENST00000315249 RPL39P5Q59GN2 51 aa11.47□□□□□ -0.57
RFFL-201ENST00000315249 TMEM255AQ5JRV8 349 aa11.47□□□□□ -0.57
RFFL-201ENST00000315249 LDLRAD3Q86YD5 345 aa11.47□□□□□ -0.57
RFFL-201ENST00000315249 AQP3Q92482 292 aa11.47□□□□□ -0.57
RFFL-201ENST00000315249 PTX4Q96A99 478 aa11.47□□□□□ -0.57
RFFL-201ENST00000315249 CDS2O95674 445 aa11.47□□□□□ -0.57
RFFL-201ENST00000315249 UNC119Q13432 240 aa11.47□□□□□ -0.57
RFFL-201ENST00000315249 NSUN5P1Q3KNT7 163 aa11.47□□□□□ -0.57
RFFL-201ENST00000315249 H0Y980 276 aa11.47□□□□□ -0.57
RFFL-201ENST00000315249 UBE2L6O14933 153 aa11.47□□□□□ -0.57
RFFL-201ENST00000315249 FBXL15Q9H469 300 aa11.47□□□□□ -0.57
RFFL-201ENST00000315249 RBKSQ9H477 322 aa11.47□□□□□ -0.57
RFFL-201ENST00000315249 SEMA5BQ9P283 1151 aa11.47□□□□□ -0.57
RFFL-201ENST00000315249 MARVELD1Q9BSK0 173 aa11.47□□□□□ -0.57
RFFL-201ENST00000315249 ZNF107Q9UII5 783 aaPredicted RBP11.47□□□□□ -0.57
RFFL-201ENST00000315249 FCN1O00602 326 aa11.46□□□□□ -0.57
RFFL-201ENST00000315249 SRSF10O75494 262 aaKnown RBP11.46□□□□□ -0.57
RFFL-201ENST00000315249 PGLYRP1O75594 196 aaPredicted RBP11.46□□□□□ -0.57
RFFL-201ENST00000315249 EFEMP2O95967 443 aa11.46□□□□□ -0.57
RFFL-201ENST00000315249 RELQ04864 619 aaPredicted RBP11.46□□□□□ -0.57
RFFL-201ENST00000315249 MFNGO00587 321 aa11.46□□□□□ -0.57
RFFL-201ENST00000315249 LINC00271P0C7V0 271 aa11.46□□□□□ -0.57
RFFL-201ENST00000315249 RAG2P55895 527 aa11.46□□□□□ -0.57
RFFL-201ENST00000315249 GBGT1Q8N5D6 347 aa11.46□□□□□ -0.57
RFFL-201ENST00000315249 MBPP02686 304 aaPredicted RBP11.46□□□□□ -0.57
RFFL-201ENST00000315249 OR5AL1P0C617 328 aa11.46□□□□□ -0.57
RFFL-201ENST00000315249 VDAC2P45880 294 aaPredicted RBP11.46□□□□□ -0.57
RFFL-201ENST00000315249 PXMP4Q9Y6I8 212 aa11.46□□□□□ -0.57
RFFL-201ENST00000315249 PAGE4O60829 102 aa11.46□□□□□ -0.58
RFFL-201ENST00000315249 C1QTNF12Q5T7M4 302 aa11.46□□□□□ -0.58
RFFL-201ENST00000315249 SLC35E4Q6ICL7 350 aa11.46□□□□□ -0.58
RFFL-201ENST00000315249 TEX261Q6UWH6 196 aa11.46□□□□□ -0.58
RFFL-201ENST00000315249 FAM210BQ96KR6 192 aa11.46□□□□□ -0.58
RFFL-201ENST00000315249 LURAP1Q96LR2 239 aa11.46□□□□□ -0.58
RFFL-201ENST00000315249 YTHDF2Q9Y5A9 579 aaKnown RBP11.46□□□□□ -0.58
RFFL-201ENST00000315249 TANC1Q9C0D5 1861 aa11.46□□□□□ -0.58
RFFL-201ENST00000315249 MFSD2BA6NFX1 497 aa11.46□□□□□ -0.58
RFFL-201ENST00000315249 NPPCP23582 126 aa11.46□□□□□ -0.58
RFFL-201ENST00000315249 CD24P25063 80 aa11.46□□□□□ -0.58
RFFL-201ENST00000315249 SUMO1P63165 101 aaKnown RBP11.46□□□□□ -0.58
RFFL-201ENST00000315249 NHLH2Q02577 135 aa11.46□□□□□ -0.58
RFFL-201ENST00000315249 IRF3Q14653 427 aa11.46□□□□□ -0.58
RFFL-201ENST00000315249 A0A0G2JNJ9 132 aa11.45□□□□□ -0.58
RFFL-201ENST00000315249 NPIPB13A6NJU9 1138 aa11.45□□□□□ -0.58
RFFL-201ENST00000315249 MARCH11A6NNE9 402 aa11.45□□□□□ -0.58
RFFL-201ENST00000315249 NPIPB4C9JG80 1138 aa11.45□□□□□ -0.58
RFFL-201ENST00000315249 S1PR2O95136 353 aa11.45□□□□□ -0.58
RFFL-201ENST00000315249 Q9UFV3 132 aa11.45□□□□□ -0.58
RFFL-201ENST00000315249 TMEM8BA6NDV4 472 aa11.45□□□□□ -0.58
RFFL-201ENST00000315249 TRBV5-5A0A0J9YX44 114 aa11.45□□□□□ -0.58
RFFL-201ENST00000315249 SCO1O75880 301 aa11.45□□□□□ -0.58
RFFL-201ENST00000315249 SNRPD3P62318 126 aaKnown RBP11.45□□□□□ -0.58
RFFL-201ENST00000315249 ITLN2Q8WWU7 325 aaPredicted RBP11.45□□□□□ -0.58
RFFL-201ENST00000315249 SLC35B3Q9H1N7 401 aa11.45□□□□□ -0.58
RFFL-201ENST00000315249 TWIST1Q15672 202 aa11.45□□□□□ -0.58
RFFL-201ENST00000315249 IL36RNQ9UBH0 155 aa11.45□□□□□ -0.58
RFFL-201ENST00000315249 TRAV40A0A0B4J280 105 aa11.45□□□□□ -0.58
RFFL-201ENST00000315249 IGHV1-18A0A0C4DH31 117 aa11.45□□□□□ -0.58
RFFL-201ENST00000315249 RGS13O14921 159 aa11.45□□□□□ -0.58
RFFL-201ENST00000315249 ELF5Q9UKW6 265 aaPredicted RBP11.45□□□□□ -0.58
RFFL-201ENST00000315249 AURKAIP1Q9NWT8 199 aaPredicted RBP11.45□□□□□ -0.58
RFFL-201ENST00000315249 FAM90A10PA6NDY2 464 aa11.44□□□□□ -0.58
RFFL-201ENST00000315249 FAM90A18PA6NE21 464 aa11.44□□□□□ -0.58
RFFL-201ENST00000315249 FAM90A16PA6NEW6 464 aa11.44□□□□□ -0.58
RFFL-201ENST00000315249 FAM90A20PA6NIJ5 464 aa11.44□□□□□ -0.58
RFFL-201ENST00000315249 FAM90A8PA6NJQ4 464 aa11.44□□□□□ -0.58
RFFL-201ENST00000315249 FAM90A7PA6NKC0 464 aa11.44□□□□□ -0.58
RFFL-201ENST00000315249 FAM90A22PA8MWA6 464 aa11.44□□□□□ -0.58
RFFL-201ENST00000315249 FAM90A12PA8MX19 464 aa11.44□□□□□ -0.58
RFFL-201ENST00000315249 FAM90A5PA8MXJ8 464 aa11.44□□□□□ -0.58
RFFL-201ENST00000315249 FAM90A23PA8MXZ1 464 aa11.44□□□□□ -0.58
RFFL-201ENST00000315249 J3QW42 95 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms