RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 LFNGQ8NES3 379 aa11.3□□□□□ -0.6
PPP1CA-201ENST00000312989 MRAPQ8TCY5 172 aa11.3□□□□□ -0.6
PPP1CA-201ENST00000312989 HARBI1Q96MB7 349 aa11.3□□□□□ -0.6
PPP1CA-201ENST00000312989 ALX4Q9H161 411 aaPredicted RBP11.3□□□□□ -0.6
PPP1CA-201ENST00000312989 ANAPC10Q9UM13 185 aa11.3□□□□□ -0.6
PPP1CA-201ENST00000312989 VSIG4Q9Y279 399 aa11.3□□□□□ -0.6
PPP1CA-201ENST00000312989 CTXN2P0C2S0 81 aa11.29□□□□□ -0.6
PPP1CA-201ENST00000312989 LGALS7P47929 136 aa11.29□□□□□ -0.6
PPP1CA-201ENST00000312989 NCS1P62166 190 aa11.29□□□□□ -0.6
PPP1CA-201ENST00000312989 OR11H1Q8NG94 326 aa11.29□□□□□ -0.6
PPP1CA-201ENST00000312989 OR13F1Q8NGS4 319 aa11.29□□□□□ -0.6
PPP1CA-201ENST00000312989 ARPC1AQ92747 370 aa11.29□□□□□ -0.6
PPP1CA-201ENST00000312989 FUNDC2Q9BWH2 189 aa11.29□□□□□ -0.6
PPP1CA-201ENST00000312989 SCOCQ9UIL1 159 aa11.29□□□□□ -0.6
PPP1CA-201ENST00000312989 RBMX2Q9Y388 322 aaKnown RBP11.29□□□□□ -0.6
PPP1CA-201ENST00000312989 A3GALT2U3KPV4 340 aa11.29□□□□□ -0.6
PPP1CA-201ENST00000312989 J3QRK9 145 aa11.28□□□□□ -0.6
PPP1CA-201ENST00000312989 TAGLNQ01995 201 aaKnown RBP11.28□□□□□ -0.6
PPP1CA-201ENST00000312989 FXYD3Q14802 87 aa11.28□□□□□ -0.6
PPP1CA-201ENST00000312989 PLGLAQ15195 96 aa11.28□□□□□ -0.6
PPP1CA-201ENST00000312989 BEST4Q8NFU0 473 aa11.28□□□□□ -0.6
PPP1CA-201ENST00000312989 SLC25A46Q96AG3 418 aa11.28□□□□□ -0.6
PPP1CA-201ENST00000312989 OR5B12Q96R08 314 aa11.28□□□□□ -0.6
PPP1CA-201ENST00000312989 MCRIP2Q9BUT9 160 aaKnown RBP11.28□□□□□ -0.6
PPP1CA-201ENST00000312989 COL7A1Q02388 2944 aa11.28□□□□□ -0.6
PPP1CA-201ENST00000312989 XRCC3O43542 346 aa11.28□□□□□ -0.6
PPP1CA-201ENST00000312989 RBMXL2O75526 392 aaKnown RBP11.28□□□□□ -0.6
PPP1CA-201ENST00000312989 UBE2KP61086 200 aa11.28□□□□□ -0.6
PPP1CA-201ENST00000312989 ACTBL2Q562R1 376 aa11.28□□□□□ -0.6
PPP1CA-201ENST00000312989 UNQ5815/PRO19632Q6UWF5 114 aa11.28□□□□□ -0.6
PPP1CA-201ENST00000312989 OR5M8Q8NGP6 311 aa11.28□□□□□ -0.6
PPP1CA-201ENST00000312989 GRPEL2Q8TAA5 225 aa11.28□□□□□ -0.6
PPP1CA-201ENST00000312989 ADTRPQ96IZ2 230 aa11.28□□□□□ -0.6
PPP1CA-201ENST00000312989 RHOVQ96L33 236 aa11.28□□□□□ -0.6
PPP1CA-201ENST00000312989 NAA50Q9GZZ1 169 aaKnown RBP11.28□□□□□ -0.6
PPP1CA-201ENST00000312989 HUWE1Q7Z6Z7 4374 aaKnown RBP11.27□□□□□ -0.61
PPP1CA-201ENST00000312989 BRI3O95415 125 aa11.27□□□□□ -0.61
PPP1CA-201ENST00000312989 CRYZL1O95825 349 aa11.27□□□□□ -0.61
PPP1CA-201ENST00000312989 LGALS1P09382 135 aaKnown RBP11.27□□□□□ -0.61
PPP1CA-201ENST00000312989 RRASP10301 218 aa11.27□□□□□ -0.61
PPP1CA-201ENST00000312989 AADACP22760 399 aa11.27□□□□□ -0.61
PPP1CA-201ENST00000312989 PRSS8Q16651 343 aa11.27□□□□□ -0.61
PPP1CA-201ENST00000312989 RTL8BQ17RB0 113 aa11.27□□□□□ -0.61
PPP1CA-201ENST00000312989 TMEM65Q6PI78 240 aa11.27□□□□□ -0.61
PPP1CA-201ENST00000312989 IDO2Q6ZQW0 420 aa11.27□□□□□ -0.61
PPP1CA-201ENST00000312989 CROCCP3Q8IVE0 287 aa11.27□□□□□ -0.61
PPP1CA-201ENST00000312989 OR1N2Q8NGR9 330 aa11.27□□□□□ -0.61
PPP1CA-201ENST00000312989 GPHA2Q96T91 129 aa11.27□□□□□ -0.61
PPP1CA-201ENST00000312989 RBM7Q9Y580 266 aaKnown RBP11.27□□□□□ -0.61
PPP1CA-201ENST00000312989 IGHV4OR15-8A0A075B7B6 117 aa11.26□□□□□ -0.61
PPP1CA-201ENST00000312989 A0A087WW49 117 aa11.26□□□□□ -0.61
PPP1CA-201ENST00000312989 SHOXO15266 292 aa11.26□□□□□ -0.61
PPP1CA-201ENST00000312989 EIF4EP06730 217 aaKnown RBP11.26□□□□□ -0.61
PPP1CA-201ENST00000312989 FCER2P06734 321 aa11.26□□□□□ -0.61
PPP1CA-201ENST00000312989 SAA1P0DJI8 122 aaPredicted RBP11.26□□□□□ -0.61
PPP1CA-201ENST00000312989 RAB25P57735 213 aa11.26□□□□□ -0.61
PPP1CA-201ENST00000312989 TAS2R20P59543 309 aa11.26□□□□□ -0.61
PPP1CA-201ENST00000312989 VBP1P61758 197 aa11.26□□□□□ -0.61
PPP1CA-201ENST00000312989 ZNF616Q08AN1 781 aa11.26□□□□□ -0.61
PPP1CA-201ENST00000312989 TMEM267Q0VDI3 215 aaPredicted RBP11.26□□□□□ -0.61
PPP1CA-201ENST00000312989 UBE2NLQ5JXB2 153 aa11.26□□□□□ -0.61
PPP1CA-201ENST00000312989 PYHIN1Q6K0P9 492 aa11.26□□□□□ -0.61
PPP1CA-201ENST00000312989 KCTD9Q7L273 389 aa11.26□□□□□ -0.61
PPP1CA-201ENST00000312989 TEX45Q8NA69 505 aa11.26□□□□□ -0.61
PPP1CA-201ENST00000312989 OSR1Q8TAX0 266 aaPredicted RBP11.26□□□□□ -0.61
PPP1CA-201ENST00000312989 GPR61Q9BZJ8 451 aa11.26□□□□□ -0.61
PPP1CA-201ENST00000312989 A0A1B0GW64 132 aa11.25□□□□□ -0.61
PPP1CA-201ENST00000312989 MEIS3P1A6NDR6 274 aa11.25□□□□□ -0.61
PPP1CA-201ENST00000312989 FCGR3BO75015 233 aa11.25□□□□□ -0.61
PPP1CA-201ENST00000312989 GABARAPO95166 117 aa11.25□□□□□ -0.61
PPP1CA-201ENST00000312989 NAT1P18440 290 aa11.25□□□□□ -0.61
PPP1CA-201ENST00000312989 FCGR2CP31995 323 aa11.25□□□□□ -0.61
PPP1CA-201ENST00000312989 SLURP1P55000 103 aa11.25□□□□□ -0.61
PPP1CA-201ENST00000312989 MSMO1Q15800 293 aa11.25□□□□□ -0.61
PPP1CA-201ENST00000312989 CTF1Q16619 201 aa11.25□□□□□ -0.61
PPP1CA-201ENST00000312989 SAMD12Q8N8I0 201 aa11.25□□□□□ -0.61
PPP1CA-201ENST00000312989 POC5Q8NA72 575 aa11.25□□□□□ -0.61
PPP1CA-201ENST00000312989 ABHD5Q8WTS1 349 aa11.25□□□□□ -0.61
PPP1CA-201ENST00000312989 DCUN1D4Q92564 292 aa11.25□□□□□ -0.61
PPP1CA-201ENST00000312989 DLX4Q92988 240 aaPredicted RBP11.25□□□□□ -0.61
PPP1CA-201ENST00000312989 MS4A10Q96PG2 267 aa11.25□□□□□ -0.61
PPP1CA-201ENST00000312989 ZNF430Q9H8G1 570 aaPredicted RBP11.25□□□□□ -0.61
PPP1CA-201ENST00000312989 VCX3AQ9NNX9 186 aa11.25□□□□□ -0.61
PPP1CA-201ENST00000312989 DIABLOQ9NR28 239 aa11.25□□□□□ -0.61
PPP1CA-201ENST00000312989 CCL28Q9NRJ3 127 aa11.25□□□□□ -0.61
PPP1CA-201ENST00000312989 H3BUA1 57 aa11.24□□□□□ -0.61
PPP1CA-201ENST00000312989 PPYP01298 95 aa11.24□□□□□ -0.61
PPP1CA-201ENST00000312989 IGHV3-11P01762 117 aa11.24□□□□□ -0.61
PPP1CA-201ENST00000312989 OR8U8P0C7N1 319 aa11.24□□□□□ -0.61
PPP1CA-201ENST00000312989 DEFA5Q01523 94 aa11.24□□□□□ -0.61
PPP1CA-201ENST00000312989 OR2B11Q5JQS5 317 aa11.24□□□□□ -0.61
PPP1CA-201ENST00000312989 C10orf55Q5SWW7 151 aa11.24□□□□□ -0.61
PPP1CA-201ENST00000312989 VKORC1L1Q8N0U8 176 aa11.24□□□□□ -0.61
PPP1CA-201ENST00000312989 PUSL1Q8N0Z8 303 aaKnown RBP11.24□□□□□ -0.61
PPP1CA-201ENST00000312989 MFSD4AQ8N468 514 aa11.24□□□□□ -0.61
PPP1CA-201ENST00000312989 ADAD2Q8NCV1 583 aaKnown RBP11.24□□□□□ -0.61
PPP1CA-201ENST00000312989 OR5AP2Q8NGF4 316 aa11.24□□□□□ -0.61
PPP1CA-201ENST00000312989 KCTD12Q96CX2 325 aaKnown RBP11.24□□□□□ -0.61
PPP1CA-201ENST00000312989 SLA2Q9H6Q3 261 aa11.24□□□□□ -0.61
PPP1CA-201ENST00000312989 SEC14L6B5MCN3 397 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms