RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 LRRTM1Q86UE6 522 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 OR10G8Q8NGN5 311 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 WDR89Q96FK6 387 aaPredicted RBP2.74□□□□□ -1.97
CLOCK-201ENST00000309964 AUP1Q9Y679 476 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 IGLV3-32A0A0A0MS00 114 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 TMEM218A2RU14 115 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 C11orf94C9JXX5 98 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 CST7O76096 145 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 NKX2-5P52952 324 aaPredicted RBP2.74□□□□□ -1.97
CLOCK-201ENST00000309964 COL10A1Q03692 680 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 AESQ08117 197 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 TWIST1Q15672 202 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 OVCH2Q7RTZ1 564 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 STPG2Q8N412 459 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 BVESQ8NE79 360 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 NRG4Q8WWG1 115 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 MRPL24Q96A35 216 aaKnown RBP2.74□□□□□ -1.97
CLOCK-201ENST00000309964 SMOC1Q9H4F8 434 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 GSX1Q9H4S2 264 aaPredicted RBP2.74□□□□□ -1.97
CLOCK-201ENST00000309964 PLSCR2Q9NRY7 297 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 CALYQ9NYX4 217 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 SOX21Q9Y651 276 aaPredicted RBP2.74□□□□□ -1.97
CLOCK-201ENST00000309964 TANC2Q9HCD6 1990 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 FAM157AC9JC47 383 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 FCN1O00602 326 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 CDC42EP2O14613 210 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 PITX3O75364 302 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 PPOXP50336 477 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 PSG5Q15238 335 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 ST3GAL2Q16842 350 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 ACSF3Q4G176 576 aaPredicted RBP2.74□□□□□ -1.97
CLOCK-201ENST00000309964 MRPL14Q6P1L8 145 aaKnown RBP2.74□□□□□ -1.97
CLOCK-201ENST00000309964 ZNF680Q8NEM1 530 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 ATG101Q9BSB4 218 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 PAXXQ9BUH6 204 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 SPANXDQ9BXN6 97 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 AP5S1Q9NUS5 200 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 NCOR2Q9Y618 2525 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 H3BP45 60 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 HLA-DQA1P01909 254 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 CELA2BP08218 269 aaPredicted RBP2.74□□□□□ -1.97
CLOCK-201ENST00000309964 CRYBB2P43320 205 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 SRSF7Q16629 238 aaKnown RBP eCLIP2.74□□□□□ -1.97
CLOCK-201ENST00000309964 LINC00052Q96N35 136 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 MS4A10Q96PG2 267 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 MSL2Q9HCI7 577 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 RPRMQ9NS64 109 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 TRAPPC1Q9Y5R8 145 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 NTN3O00634 580 aaPredicted RBP2.74□□□□□ -1.97
CLOCK-201ENST00000309964 TGFAP01135 160 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 RPL29P47914 159 aaKnown RBP2.74□□□□□ -1.97
CLOCK-201ENST00000309964 ECSCRQ19T08 205 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 LINC00303Q3SY05 128 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 TMEM54Q969K7 222 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 ALKBH7Q9BT30 221 aaPredicted RBP2.74□□□□□ -1.97
CLOCK-201ENST00000309964 RBKSQ9H477 322 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 BSXQ3C1V8 233 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 SCGB1D4Q6XE38 83 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 SPACA3Q8IXA5 215 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 CADM3Q8N126 398 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 GBGT1Q8N5D6 347 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 TMEM116Q8NCL8 245 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 SLIRPQ9GZT3 109 aaKnown RBP2.74□□□□□ -1.97
CLOCK-201ENST00000309964 C7orf69Q9H7B7 122 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 CCL27Q9Y4X3 112 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 TMEM250H0YL14 139 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 PYCARD-AS1I3L0S3 204 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 J3QLI3 93 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 NEURL1O76050 574 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 OR2H2O95918 312 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 OR5AL1P0C617 328 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 EFNA4P52798 201 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 Q1RN00 199 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 CLLU1Q5K131 121 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 UNQ5815/PRO19632Q6UWF5 114 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 PPP1R32Q7Z5V6 425 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 CLRN3Q8NCR9 226 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 ZNF430Q9H8G1 570 aaPredicted RBP2.74□□□□□ -1.97
CLOCK-201ENST00000309964 TBL2Q9Y4P3 447 aaKnown RBP2.74□□□□□ -1.97
CLOCK-201ENST00000309964 LOC101059948A0A1B0GTJ6 334 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 F12P00748 615 aaPredicted RBP2.74□□□□□ -1.97
CLOCK-201ENST00000309964 PRSS1P07477 247 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 LTBRP36941 435 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 LIMS1P48059 325 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 LRRC75AQ8NAA5 344 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 OR4P4Q8NGL7 312 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 VN1R17PQ8TDU5 208 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 ARPC1AQ92747 370 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 SLC50A1Q9BRV3 221 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 MCRIP2Q9BUT9 160 aaKnown RBP2.74□□□□□ -1.97
CLOCK-201ENST00000309964 TMEM222Q9H0R3 208 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 TNFRSF19Q9NS68 423 aa2.74□□□□□ -1.97
CLOCK-201ENST00000309964 KIAA1549LQ6ZVL6 1849 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 KIAA1549Q9HCM3 1950 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 CXorf65A6NEN9 183 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 UPK2O00526 184 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 CIDEAO60543 219 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 YPEL1O60688 119 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 SBK3P0C264 359 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 DGCR2P98153 550 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms