RNA–Protein interactions for RNA: ENST00000309263.7

SCUBE2-201, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5 BASIC

Gene SCUBE2, Length 3,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-201ENST00000309263 CCKARP32238 428 aa12.12□□□□□ -0.47
SCUBE2-201ENST00000309263 EDDM3AQ14507 147 aa12.12□□□□□ -0.47
SCUBE2-201ENST00000309263 KIAA1644Q3SXP7 199 aa12.12□□□□□ -0.47
SCUBE2-201ENST00000309263 ACTL10Q5JWF8 245 aa12.12□□□□□ -0.47
SCUBE2-201ENST00000309263 DBX2Q6ZNG2 339 aa12.12□□□□□ -0.47
SCUBE2-201ENST00000309263 CISD2Q8N5K1 135 aaKnown RBP12.12□□□□□ -0.47
SCUBE2-201ENST00000309263 TMEM68Q96MH6 324 aa12.12□□□□□ -0.47
SCUBE2-201ENST00000309263 NPSP0C0P6 89 aa12.12□□□□□ -0.47
SCUBE2-201ENST00000309263 NPPCP23582 126 aa12.12□□□□□ -0.47
SCUBE2-201ENST00000309263 ADMP35318 185 aa12.12□□□□□ -0.47
SCUBE2-201ENST00000309263 RPL30P62888 115 aaKnown RBP12.12□□□□□ -0.47
SCUBE2-201ENST00000309263 TGIF2LYQ8IUE0 185 aa12.12□□□□□ -0.47
SCUBE2-201ENST00000309263 VKORC1L1Q8N0U8 176 aa12.12□□□□□ -0.47
SCUBE2-201ENST00000309263 KCNE4Q8WWG9 221 aa12.12□□□□□ -0.47
SCUBE2-201ENST00000309263 GOLT1BQ9Y3E0 138 aa12.12□□□□□ -0.47
SCUBE2-201ENST00000309263 C17orf98A8MV24 154 aa12.12□□□□□ -0.47
SCUBE2-201ENST00000309263 EPHA8P29322 1005 aaPredicted RBP12.12□□□□□ -0.47
SCUBE2-201ENST00000309263 B3GALT5-AS1P59052 145 aa12.12□□□□□ -0.47
SCUBE2-201ENST00000309263 PLGLB1Q02325 96 aa12.12□□□□□ -0.47
SCUBE2-201ENST00000309263 SP5Q6BEB4 398 aaPredicted RBP12.12□□□□□ -0.47
SCUBE2-201ENST00000309263 ZNF826PQ6ZT77 177 aa12.12□□□□□ -0.47
SCUBE2-201ENST00000309263 LSM10Q969L4 123 aaKnown RBP12.12□□□□□ -0.47
SCUBE2-201ENST00000309263 APH1AQ96BI3 265 aa12.12□□□□□ -0.47
SCUBE2-201ENST00000309263 BTF3L4Q96K17 158 aa12.12□□□□□ -0.47
SCUBE2-201ENST00000309263 IRF2P14316 349 aa12.11□□□□□ -0.47
SCUBE2-201ENST00000309263 TCL1AP56279 114 aa12.11□□□□□ -0.47
SCUBE2-201ENST00000309263 C1orf210Q8IVY1 113 aa12.11□□□□□ -0.47
SCUBE2-201ENST00000309263 DUSP23Q9BVJ7 150 aa12.11□□□□□ -0.47
SCUBE2-201ENST00000309263 HEYLQ9NQ87 328 aaPredicted RBP12.11□□□□□ -0.47
SCUBE2-201ENST00000309263 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.11□□□□□ -0.47
SCUBE2-201ENST00000309263 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.11□□□□□ -0.47
SCUBE2-201ENST00000309263 FAM90A10PA6NDY2 464 aa12.11□□□□□ -0.47
SCUBE2-201ENST00000309263 FAM90A18PA6NE21 464 aa12.11□□□□□ -0.47
SCUBE2-201ENST00000309263 FAM90A16PA6NEW6 464 aa12.11□□□□□ -0.47
SCUBE2-201ENST00000309263 FAM90A20PA6NIJ5 464 aa12.11□□□□□ -0.47
SCUBE2-201ENST00000309263 FAM90A8PA6NJQ4 464 aa12.11□□□□□ -0.47
SCUBE2-201ENST00000309263 FAM90A7PA6NKC0 464 aa12.11□□□□□ -0.47
SCUBE2-201ENST00000309263 FAM90A22PA8MWA6 464 aa12.11□□□□□ -0.47
SCUBE2-201ENST00000309263 FAM90A12PA8MX19 464 aa12.11□□□□□ -0.47
SCUBE2-201ENST00000309263 FAM90A5PA8MXJ8 464 aa12.11□□□□□ -0.47
SCUBE2-201ENST00000309263 FAM90A23PA8MXZ1 464 aa12.11□□□□□ -0.47
SCUBE2-201ENST00000309263 FAM90A15PP0C7V4 464 aa12.11□□□□□ -0.47
SCUBE2-201ENST00000309263 FAM90A13PP0C7W8 464 aa12.11□□□□□ -0.47
SCUBE2-201ENST00000309263 FAM90A14PP0C7W9 464 aa12.11□□□□□ -0.47
SCUBE2-201ENST00000309263 FAM90A24PP0C7X0 464 aa12.11□□□□□ -0.47
SCUBE2-201ENST00000309263 OR10J1P30954 320 aa12.11□□□□□ -0.47
SCUBE2-201ENST00000309263 IER3P46695 156 aa12.11□□□□□ -0.47
SCUBE2-201ENST00000309263 GNB1P62873 340 aa12.11□□□□□ -0.47
SCUBE2-201ENST00000309263 LINC01551Q86U37 167 aa12.11□□□□□ -0.47
SCUBE2-201ENST00000309263 IGF2RP11717 2491 aa12.11□□□□□ -0.47
SCUBE2-201ENST00000309263 TOX3O15405 576 aaPredicted RBP12.11□□□□□ -0.47
SCUBE2-201ENST00000309263 ACTL6BO94805 426 aa12.11□□□□□ -0.47
SCUBE2-201ENST00000309263 BEND2Q8NDZ0 799 aa12.11□□□□□ -0.47
SCUBE2-201ENST00000309263 OBP2BQ9NPH6 170 aa12.11□□□□□ -0.47
SCUBE2-201ENST00000309263 FZR1Q9UM11 496 aa12.11□□□□□ -0.47
SCUBE2-201ENST00000309263 DOPEY2Q9Y3R5 2298 aa12.1□□□□□ -0.47
SCUBE2-201ENST00000309263 FCN1O00602 326 aa12.1□□□□□ -0.47
SCUBE2-201ENST00000309263 CRISP2P16562 243 aa12.1□□□□□ -0.47
SCUBE2-201ENST00000309263 PMCHP20382 165 aa12.1□□□□□ -0.47
SCUBE2-201ENST00000309263 LYSMD4Q5XG99 296 aa12.1□□□□□ -0.47
SCUBE2-201ENST00000309263 OR2Y1Q8NGV0 311 aa12.1□□□□□ -0.47
SCUBE2-201ENST00000309263 VAMP8Q9BV40 100 aa12.1□□□□□ -0.47
SCUBE2-201ENST00000309263 PCED1AQ9H1Q7 454 aa12.1□□□□□ -0.47
SCUBE2-201ENST00000309263 PSG11Q9UQ72 335 aa12.1□□□□□ -0.47
SCUBE2-201ENST00000309263 TLN1Q9Y490 2541 aaKnown RBP12.1□□□□□ -0.47
SCUBE2-201ENST00000309263 C17orf112F2Z3M2 114 aa12.1□□□□□ -0.47
SCUBE2-201ENST00000309263 MT-CO3P00414 261 aa12.1□□□□□ -0.47
SCUBE2-201ENST00000309263 IGLV2-14P01704 120 aa12.1□□□□□ -0.47
SCUBE2-201ENST00000309263 RIPPLY2Q5TAB7 128 aa12.1□□□□□ -0.47
SCUBE2-201ENST00000309263 DMRTA1Q5VZB9 504 aa12.1□□□□□ -0.47
SCUBE2-201ENST00000309263 GALMQ96C23 342 aa12.1□□□□□ -0.47
SCUBE2-201ENST00000309263 GCM1Q9NP62 436 aa12.1□□□□□ -0.47
SCUBE2-201ENST00000309263 ADGRG4Q8IZF6 3080 aa12.1□□□□□ -0.47
SCUBE2-201ENST00000309263 WNT9BO14905 357 aa12.1□□□□□ -0.47
SCUBE2-201ENST00000309263 RBFOX2O43251 390 aaKnown RBP eCLIP12.1□□□□□ -0.47
SCUBE2-201ENST00000309263 RPLP1P05386 114 aaKnown RBP12.1□□□□□ -0.47
SCUBE2-201ENST00000309263 CDKN1AP38936 164 aa12.1□□□□□ -0.47
SCUBE2-201ENST00000309263 TNFSF10P50591 281 aa12.1□□□□□ -0.47
SCUBE2-201ENST00000309263 ABLIM2Q6H8Q1 611 aa12.1□□□□□ -0.47
SCUBE2-201ENST00000309263 TMEM208Q9BTX3 173 aa12.1□□□□□ -0.47
SCUBE2-201ENST00000309263 SCO2A0A1W2PP80 73 aa12.09□□□□□ -0.47
SCUBE2-201ENST00000309263 ARL14EPLP0DKL9 152 aa12.09□□□□□ -0.47
SCUBE2-201ENST00000309263 TDGF1P3P51864 188 aa12.09□□□□□ -0.47
SCUBE2-201ENST00000309263 ALKBH6Q3KRA9 238 aa12.09□□□□□ -0.47
SCUBE2-201ENST00000309263 SPSB4Q96A44 273 aa12.09□□□□□ -0.47
SCUBE2-201ENST00000309263 LRRC30A6NM36 301 aa12.09□□□□□ -0.47
SCUBE2-201ENST00000309263 SERF1AO75920 110 aa12.09□□□□□ -0.47
SCUBE2-201ENST00000309263 MAGEA5P43359 124 aa12.09□□□□□ -0.47
SCUBE2-201ENST00000309263 CATR1Q13166 79 aa12.09□□□□□ -0.47
SCUBE2-201ENST00000309263 MIC13Q5XKP0 118 aa12.09□□□□□ -0.47
SCUBE2-201ENST00000309263 TMEM105Q8N8V8 129 aa12.09□□□□□ -0.47
SCUBE2-201ENST00000309263 OR2J1Q9GZK6 312 aa12.09□□□□□ -0.47
SCUBE2-201ENST00000309263 RNF212BA8MTL3 300 aa12.09□□□□□ -0.47
SCUBE2-201ENST00000309263 F2Z2F3 143 aa12.09□□□□□ -0.47
SCUBE2-201ENST00000309263 FRMD6-AS1P0C7T7 363 aa12.09□□□□□ -0.47
SCUBE2-201ENST00000309263 NTF3P20783 257 aa12.09□□□□□ -0.47
SCUBE2-201ENST00000309263 SRP14P37108 136 aaKnown RBP12.09□□□□□ -0.47
SCUBE2-201ENST00000309263 HTD2P86397 168 aa12.09□□□□□ -0.47
SCUBE2-201ENST00000309263 PRR31Q5SQ13 230 aa12.09□□□□□ -0.47
SCUBE2-201ENST00000309263 DNLZQ5SXM8 178 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms