RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 DANCRP0C864 163 aa9.66□□□□□ -0.86
PCDHGC3-201ENST00000308177 HSPE1P61604 102 aaKnown RBP9.66□□□□□ -0.86
PCDHGC3-201ENST00000308177 KHDC1LQ5JSQ8 128 aa9.66□□□□□ -0.86
PCDHGC3-201ENST00000308177 ZDHHC16Q969W1 377 aa9.66□□□□□ -0.86
PCDHGC3-201ENST00000308177 TMEM18Q96B42 140 aa9.66□□□□□ -0.86
PCDHGC3-201ENST00000308177 KIAA2026Q5HYC2 2103 aa9.66□□□□□ -0.86
PCDHGC3-201ENST00000308177 LRRK1Q38SD2 2015 aa9.66□□□□□ -0.86
PCDHGC3-201ENST00000308177 TRBV6-7A0A0A0MS04 114 aa9.66□□□□□ -0.86
PCDHGC3-201ENST00000308177 CXorf1O96002 111 aa9.66□□□□□ -0.86
PCDHGC3-201ENST00000308177 ID4P47928 161 aa9.66□□□□□ -0.86
PCDHGC3-201ENST00000308177 RPL8P62917 257 aaKnown RBP9.66□□□□□ -0.86
PCDHGC3-201ENST00000308177 FOXF2Q12947 444 aa9.66□□□□□ -0.86
PCDHGC3-201ENST00000308177 PEAR1Q5VY43 1037 aaPredicted RBP9.66□□□□□ -0.86
PCDHGC3-201ENST00000308177 FOXL2NBQ6ZUU3 175 aa9.66□□□□□ -0.86
PCDHGC3-201ENST00000308177 OR4X1Q8NH49 305 aa9.66□□□□□ -0.86
PCDHGC3-201ENST00000308177 TLNRD1Q9H1K6 362 aa9.66□□□□□ -0.86
PCDHGC3-201ENST00000308177 TRAPPC1Q9Y5R8 145 aa9.66□□□□□ -0.86
PCDHGC3-201ENST00000308177 TRAV24A0A0B4J272 114 aa9.65□□□□□ -0.86
PCDHGC3-201ENST00000308177 XKRY2A2RUG3 117 aa9.65□□□□□ -0.86
PCDHGC3-201ENST00000308177 CTRB1P17538 263 aa9.65□□□□□ -0.86
PCDHGC3-201ENST00000308177 TMEM30BQ3MIR4 351 aa9.65□□□□□ -0.86
PCDHGC3-201ENST00000308177 CTRB2Q6GPI1 263 aa9.65□□□□□ -0.86
PCDHGC3-201ENST00000308177 MUC15Q8N387 334 aa9.65□□□□□ -0.86
PCDHGC3-201ENST00000308177 LINC01560Q8TB33 94 aa9.65□□□□□ -0.86
PCDHGC3-201ENST00000308177 TMEM171Q8WVE6 324 aa9.65□□□□□ -0.86
PCDHGC3-201ENST00000308177 PXMP4Q9Y6I8 212 aa9.65□□□□□ -0.86
PCDHGC3-201ENST00000308177 IGKV1D-13A0A0B4J2D9 117 aa9.65□□□□□ -0.86
PCDHGC3-201ENST00000308177 ZNF785A8K8V0 405 aa9.65□□□□□ -0.86
PCDHGC3-201ENST00000308177 B9A039 149 aa9.65□□□□□ -0.86
PCDHGC3-201ENST00000308177 IGKV1-13P0DP09 117 aa9.65□□□□□ -0.86
PCDHGC3-201ENST00000308177 SPP1P10451 314 aa9.65□□□□□ -0.86
PCDHGC3-201ENST00000308177 NTF3P20783 257 aa9.65□□□□□ -0.86
PCDHGC3-201ENST00000308177 FHITP49789 147 aa9.65□□□□□ -0.86
PCDHGC3-201ENST00000308177 FAM74A3Q4VXF1 159 aa9.65□□□□□ -0.86
PCDHGC3-201ENST00000308177 SPSB4Q96A44 273 aa9.65□□□□□ -0.86
PCDHGC3-201ENST00000308177 MARVELD3Q96A59 401 aa9.65□□□□□ -0.86
PCDHGC3-201ENST00000308177 DCTN5Q9BTE1 182 aa9.65□□□□□ -0.86
PCDHGC3-201ENST00000308177 BARX1Q9HBU1 254 aaPredicted RBP9.65□□□□□ -0.86
PCDHGC3-201ENST00000308177 WASHC3Q9Y3C0 194 aa9.65□□□□□ -0.86
PCDHGC3-201ENST00000308177 IGHV1-69-2A0A0G2JMI3 117 aa9.65□□□□□ -0.86
PCDHGC3-201ENST00000308177 IGSF23A1L1A6 192 aa9.65□□□□□ -0.86
PCDHGC3-201ENST00000308177 RPL27AP46776 148 aaKnown RBP9.65□□□□□ -0.86
PCDHGC3-201ENST00000308177 ARL16Q0P5N6 197 aa9.65□□□□□ -0.86
PCDHGC3-201ENST00000308177 PDPNQ86YL7 162 aa9.65□□□□□ -0.86
PCDHGC3-201ENST00000308177 CADP27708 2225 aa9.65□□□□□ -0.87
PCDHGC3-201ENST00000308177 PDE6DO43924 150 aa9.65□□□□□ -0.87
PCDHGC3-201ENST00000308177 GNG7O60262 68 aa9.65□□□□□ -0.87
PCDHGC3-201ENST00000308177 PAX5Q02548 391 aa9.65□□□□□ -0.87
PCDHGC3-201ENST00000308177 CCDC144NLQ6NUI1 221 aa9.65□□□□□ -0.87
PCDHGC3-201ENST00000308177 VKORC1L1Q8N0U8 176 aa9.65□□□□□ -0.87
PCDHGC3-201ENST00000308177 PCGF1Q9BSM1 259 aa9.65□□□□□ -0.87
PCDHGC3-201ENST00000308177 RNF126Q9BV68 326 aa9.65□□□□□ -0.87
PCDHGC3-201ENST00000308177 PROK2Q9HC23 129 aa9.65□□□□□ -0.87
PCDHGC3-201ENST00000308177 TCF19Q9Y242 345 aa9.65□□□□□ -0.87
PCDHGC3-201ENST00000308177 CLN5O75503 358 aa9.64□□□□□ -0.87
PCDHGC3-201ENST00000308177 KIR2DL2P43627 348 aaPredicted RBP9.64□□□□□ -0.87
PCDHGC3-201ENST00000308177 QRFPP83859 136 aa9.64□□□□□ -0.87
PCDHGC3-201ENST00000308177 BSPH1Q075Z2 132 aa9.64□□□□□ -0.87
PCDHGC3-201ENST00000308177 LHFPL1Q86WI0 220 aa9.64□□□□□ -0.87
PCDHGC3-201ENST00000308177 OR2T10Q8NGZ9 312 aa9.64□□□□□ -0.87
PCDHGC3-201ENST00000308177 COL4A4P53420 1690 aaPredicted RBP9.64□□□□□ -0.87
PCDHGC3-201ENST00000308177 F2RL2O00254 374 aa9.64□□□□□ -0.87
PCDHGC3-201ENST00000308177 SRSF6Q13247 344 aaKnown RBP9.64□□□□□ -0.87
PCDHGC3-201ENST00000308177 LHFPL5Q8TAF8 219 aa9.64□□□□□ -0.87
PCDHGC3-201ENST00000308177 ASCL3Q9NQ33 180 aa9.64□□□□□ -0.87
PCDHGC3-201ENST00000308177 SIRT7Q9NRC8 400 aa9.64□□□□□ -0.87
PCDHGC3-201ENST00000308177 SPINK4O60575 86 aa9.64□□□□□ -0.87
PCDHGC3-201ENST00000308177 RAB5AP20339 215 aa9.64□□□□□ -0.87
PCDHGC3-201ENST00000308177 APOBEC3AP31941 199 aaPredicted RBP9.64□□□□□ -0.87
PCDHGC3-201ENST00000308177 RPL39P5Q59GN2 51 aa9.64□□□□□ -0.87
PCDHGC3-201ENST00000308177 FAM209AQ5JX71 171 aa9.64□□□□□ -0.87
PCDHGC3-201ENST00000308177 TMEM42Q69YG0 159 aa9.64□□□□□ -0.87
PCDHGC3-201ENST00000308177 WDR82Q6UXN9 313 aa9.64□□□□□ -0.87
PCDHGC3-201ENST00000308177 FAM216BQ8N7L0 139 aa9.64□□□□□ -0.87
PCDHGC3-201ENST00000308177 OR10G8Q8NGN5 311 aa9.64□□□□□ -0.87
PCDHGC3-201ENST00000308177 OR9G1Q8NH87 305 aa9.64□□□□□ -0.87
PCDHGC3-201ENST00000308177 TOLLIPQ9H0E2 274 aa9.64□□□□□ -0.87
PCDHGC3-201ENST00000308177 TMEM56-RWDD3S4R434 201 aa9.64□□□□□ -0.87
PCDHGC3-201ENST00000308177 CRYBA1P05813 215 aa9.64□□□□□ -0.87
PCDHGC3-201ENST00000308177 FAM157CP0CG43 387 aa9.64□□□□□ -0.87
PCDHGC3-201ENST00000308177 OR10J1P30954 320 aa9.64□□□□□ -0.87
PCDHGC3-201ENST00000308177 C10orf113Q5VZT2 155 aa9.64□□□□□ -0.87
PCDHGC3-201ENST00000308177 DHRS7BQ6IAN0 325 aaPredicted RBP9.64□□□□□ -0.87
PCDHGC3-201ENST00000308177 RASL11BQ9BPW5 248 aa9.64□□□□□ -0.87
PCDHGC3-201ENST00000308177 TMUB1Q9BVT8 246 aa9.64□□□□□ -0.87
PCDHGC3-201ENST00000308177 LPAR2Q9HBW0 351 aa9.64□□□□□ -0.87
PCDHGC3-201ENST00000308177 ABCA4P78363 2273 aa9.63□□□□□ -0.87
PCDHGC3-201ENST00000308177 IGHV1-18A0A0C4DH31 117 aa9.63□□□□□ -0.87
PCDHGC3-201ENST00000308177 DBX1A6NMT0 343 aa9.63□□□□□ -0.87
PCDHGC3-201ENST00000308177 HSPB1P04792 205 aaKnown RBP9.63□□□□□ -0.87
PCDHGC3-201ENST00000308177 OR5I1Q13606 314 aa9.63□□□□□ -0.87
PCDHGC3-201ENST00000308177 FAM90A1Q86YD7 464 aa9.63□□□□□ -0.87
PCDHGC3-201ENST00000308177 ABHD12Q8N2K0 398 aa9.63□□□□□ -0.87
PCDHGC3-201ENST00000308177 TMEM106BQ9NUM4 274 aa9.63□□□□□ -0.87
PCDHGC3-201ENST00000308177 H0YIZ8 118 aa9.63□□□□□ -0.87
PCDHGC3-201ENST00000308177 GATCO43716 136 aaKnown RBP9.63□□□□□ -0.87
PCDHGC3-201ENST00000308177 LGALS7P47929 136 aa9.63□□□□□ -0.87
PCDHGC3-201ENST00000308177 SPNS3Q6ZMD2 512 aa9.63□□□□□ -0.87
PCDHGC3-201ENST00000308177 MMD2Q8IY49 270 aa9.63□□□□□ -0.87
PCDHGC3-201ENST00000308177 ANAPC16Q96DE5 110 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms