RNA–Protein interactions for RNA: ENST00000307216.10

TMEM87A-201, Transcript of transmembrane protein 87A, humanhuman

TSL 1 (best) BASIC

Gene TMEM87A, Length 1,598 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87A-201ENST00000307216 MAP1LC3B2A6NCE7 125 aa11.79□□□□□ -0.52
TMEM87A-201ENST00000307216 ZG16O60844 167 aa11.79□□□□□ -0.52
TMEM87A-201ENST00000307216 TFF1P04155 84 aa11.79□□□□□ -0.52
TMEM87A-201ENST00000307216 CRYBA1P05813 215 aa11.79□□□□□ -0.52
TMEM87A-201ENST00000307216 MEF2CQ06413 473 aaPredicted RBP11.79□□□□□ -0.52
TMEM87A-201ENST00000307216 C17orf58Q2M2W7 97 aa11.79□□□□□ -0.52
TMEM87A-201ENST00000307216 MALSU1Q96EH3 234 aa11.79□□□□□ -0.52
TMEM87A-201ENST00000307216 DCTN5Q9BTE1 182 aa11.79□□□□□ -0.52
TMEM87A-201ENST00000307216 LRFN3Q9BTN0 628 aa11.79□□□□□ -0.52
TMEM87A-201ENST00000307216 MAP1LC3BQ9GZQ8 125 aa11.79□□□□□ -0.52
TMEM87A-201ENST00000307216 ESRP2Q9H6T0 727 aaKnown RBP11.79□□□□□ -0.52
TMEM87A-201ENST00000307216 KCNIP2Q9NS61 270 aa11.79□□□□□ -0.52
TMEM87A-201ENST00000307216 SLC39A9Q9NUM3 307 aa11.79□□□□□ -0.52
TMEM87A-201ENST00000307216 RFNGQ9Y644 331 aa11.79□□□□□ -0.52
TMEM87A-201ENST00000307216 DSCAML1Q8TD84 2053 aa11.78□□□□□ -0.52
TMEM87A-201ENST00000307216 MED19A0JLT2 244 aaPredicted RBP11.78□□□□□ -0.52
TMEM87A-201ENST00000307216 H3BQ15 152 aa11.78□□□□□ -0.52
TMEM87A-201ENST00000307216 IFNA17P01571 189 aa11.78□□□□□ -0.52
TMEM87A-201ENST00000307216 FGF7P21781 194 aa11.78□□□□□ -0.52
TMEM87A-201ENST00000307216 CCKARP32238 428 aa11.78□□□□□ -0.52
TMEM87A-201ENST00000307216 LTC4SQ16873 150 aa11.78□□□□□ -0.52
TMEM87A-201ENST00000307216 AKIRIN2Q53H80 203 aa11.78□□□□□ -0.52
TMEM87A-201ENST00000307216 DDB2Q92466 427 aa11.78□□□□□ -0.52
TMEM87A-201ENST00000307216 HIST1H2BAQ96A08 127 aa11.78□□□□□ -0.52
TMEM87A-201ENST00000307216 GAFA1Q96PS6 74 aa11.78□□□□□ -0.52
TMEM87A-201ENST00000307216 ACTR3CQ9C0K3 210 aaPredicted RBP11.78□□□□□ -0.52
TMEM87A-201ENST00000307216 GAL3ST2Q9H3Q3 398 aa11.78□□□□□ -0.52
TMEM87A-201ENST00000307216 MANBALQ9NQG1 85 aa11.78□□□□□ -0.52
TMEM87A-201ENST00000307216 GNG13Q9P2W3 67 aa11.78□□□□□ -0.52
TMEM87A-201ENST00000307216 KLF2Q9Y5W3 355 aaPredicted RBP11.78□□□□□ -0.52
TMEM87A-201ENST00000307216 PUS1Q9Y606 427 aaKnown RBP eCLIP11.78□□□□□ -0.52
TMEM87A-201ENST00000307216 C17orf100A8MU93 164 aa11.77□□□□□ -0.53
TMEM87A-201ENST00000307216 K7ENP7 123 aa11.77□□□□□ -0.53
TMEM87A-201ENST00000307216 NDUFA2O43678 99 aa11.77□□□□□ -0.53
TMEM87A-201ENST00000307216 HRASP01112 189 aa11.77□□□□□ -0.53
TMEM87A-201ENST00000307216 IFNA4P05014 189 aa11.77□□□□□ -0.53
TMEM87A-201ENST00000307216 ARG1P05089 322 aa11.77□□□□□ -0.53
TMEM87A-201ENST00000307216 ATP5IP56385 69 aaPredicted RBP11.77□□□□□ -0.53
TMEM87A-201ENST00000307216 OR2B8PP59922 312 aa11.77□□□□□ -0.53
TMEM87A-201ENST00000307216 RAB11AP62491 216 aa11.77□□□□□ -0.53
TMEM87A-201ENST00000307216 POU2AF1Q16633 256 aa11.77□□□□□ -0.53
TMEM87A-201ENST00000307216 SPACA3Q8IXA5 215 aa11.77□□□□□ -0.53
TMEM87A-201ENST00000307216 RAB39BQ96DA2 213 aa11.77□□□□□ -0.53
TMEM87A-201ENST00000307216 LINC00312Q9Y6C7 94 aa11.77□□□□□ -0.53
TMEM87A-201ENST00000307216 CYB5BO43169 146 aa11.76□□□□□ -0.53
TMEM87A-201ENST00000307216 MDKP21741 143 aaPredicted RBP11.76□□□□□ -0.53
TMEM87A-201ENST00000307216 HOXA1P49639 335 aaPredicted RBP11.76□□□□□ -0.53
TMEM87A-201ENST00000307216 TMPRSS3P57727 454 aa11.76□□□□□ -0.53
TMEM87A-201ENST00000307216 HOXA4Q00056 320 aaPredicted RBP11.76□□□□□ -0.53
TMEM87A-201ENST00000307216 TBR1Q16650 682 aa11.76□□□□□ -0.53
TMEM87A-201ENST00000307216 TMEM249Q2WGJ8 235 aa11.76□□□□□ -0.53
TMEM87A-201ENST00000307216 ACOT6Q3I5F7 207 aaPredicted RBP11.76□□□□□ -0.53
TMEM87A-201ENST00000307216 ASCL5Q7RTU5 278 aa11.76□□□□□ -0.53
TMEM87A-201ENST00000307216 WFDC8Q8IUA0 241 aa11.76□□□□□ -0.53
TMEM87A-201ENST00000307216 CISD2Q8N5K1 135 aaKnown RBP11.76□□□□□ -0.53
TMEM87A-201ENST00000307216 CYB561D1Q8N8Q1 229 aa11.76□□□□□ -0.53
TMEM87A-201ENST00000307216 QTRT1Q9BXR0 403 aaKnown RBP11.76□□□□□ -0.53
TMEM87A-201ENST00000307216 TTC28Q96AY4 2481 aa11.76□□□□□ -0.53
TMEM87A-201ENST00000307216 PROP1O75360 226 aa11.75□□□□□ -0.53
TMEM87A-201ENST00000307216 OR2C1O95371 312 aa11.75□□□□□ -0.53
TMEM87A-201ENST00000307216 OR9G9P0C7N8 305 aa11.75□□□□□ -0.53
TMEM87A-201ENST00000307216 UCNP55089 124 aa11.75□□□□□ -0.53
TMEM87A-201ENST00000307216 DLK1P80370 383 aa11.75□□□□□ -0.53
TMEM87A-201ENST00000307216 MRPS11P82912 194 aaKnown RBP11.75□□□□□ -0.53
TMEM87A-201ENST00000307216 ADIPOQQ15848 244 aa11.75□□□□□ -0.53
TMEM87A-201ENST00000307216 ZNF726P1Q15940 193 aa11.75□□□□□ -0.53
TMEM87A-201ENST00000307216 FAM53AQ6NSI3 398 aaPredicted RBP11.75□□□□□ -0.53
TMEM87A-201ENST00000307216 LCN15Q6UWW0 184 aa11.75□□□□□ -0.53
TMEM87A-201ENST00000307216 Q8NA96 180 aa11.75□□□□□ -0.53
TMEM87A-201ENST00000307216 ZNF439Q8NDP4 499 aa11.75□□□□□ -0.53
TMEM87A-201ENST00000307216 LHX4Q969G2 390 aa11.75□□□□□ -0.53
TMEM87A-201ENST00000307216 NPCDR1Q9BY65 106 aa11.75□□□□□ -0.53
TMEM87A-201ENST00000307216 TMEM140Q9NV12 185 aa11.75□□□□□ -0.53
TMEM87A-201ENST00000307216 TMEM242Q9NWH2 141 aa11.75□□□□□ -0.53
TMEM87A-201ENST00000307216 FOXA2Q9Y261 457 aaPredicted RBP11.75□□□□□ -0.53
TMEM87A-201ENST00000307216 RAI1Q7Z5J4 1906 aaPredicted RBP11.75□□□□□ -0.53
TMEM87A-201ENST00000307216 DYSFO75923 2080 aa11.75□□□□□ -0.53
TMEM87A-201ENST00000307216 EP300Q09472 2414 aaPredicted RBP11.75□□□□□ -0.53
TMEM87A-201ENST00000307216 C15orf62A8K5M9 175 aa11.75□□□□□ -0.53
TMEM87A-201ENST00000307216 CYB5R3P00387 301 aaPredicted RBP11.75□□□□□ -0.53
TMEM87A-201ENST00000307216 OR4A8P0C604 315 aa11.75□□□□□ -0.53
TMEM87A-201ENST00000307216 DAOP14920 347 aa11.75□□□□□ -0.53
TMEM87A-201ENST00000307216 RAB5AP20339 215 aa11.75□□□□□ -0.53
TMEM87A-201ENST00000307216 PSMB3P49720 205 aa11.75□□□□□ -0.53
TMEM87A-201ENST00000307216 RELBQ01201 579 aa11.75□□□□□ -0.53
TMEM87A-201ENST00000307216 RTL8BQ17RB0 113 aa11.75□□□□□ -0.53
TMEM87A-201ENST00000307216 SPRNQ5BIV9 151 aa11.75□□□□□ -0.53
TMEM87A-201ENST00000307216 CT45A1Q5HYN5 189 aa11.75□□□□□ -0.53
TMEM87A-201ENST00000307216 C1QL4Q86Z23 238 aa11.75□□□□□ -0.53
TMEM87A-201ENST00000307216 OR10G9Q8NGN4 311 aa11.75□□□□□ -0.53
TMEM87A-201ENST00000307216 OR10G7Q8NGN6 311 aa11.75□□□□□ -0.53
TMEM87A-201ENST00000307216 CT45A3Q8NHU0 189 aa11.75□□□□□ -0.53
TMEM87A-201ENST00000307216 RND1Q92730 232 aa11.75□□□□□ -0.53
TMEM87A-201ENST00000307216 RAB1CQ92928 201 aa11.75□□□□□ -0.53
TMEM87A-201ENST00000307216 ZDHHC16Q969W1 377 aa11.75□□□□□ -0.53
TMEM87A-201ENST00000307216 HEYLQ9NQ87 328 aaPredicted RBP11.75□□□□□ -0.53
TMEM87A-201ENST00000307216 RPUSD1Q9UJJ7 312 aaKnown RBP11.75□□□□□ -0.53
TMEM87A-201ENST00000307216 WDR83OSQ9Y284 106 aa11.75□□□□□ -0.53
TMEM87A-201ENST00000307216 SAA2-SAA4A0A096LPE2 208 aa11.74□□□□□ -0.53
TMEM87A-201ENST00000307216 DPRXA6NFQ7 191 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms