RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 FAAP24Q9BTP7 215 aa8.68□□□□□ -1.02
SMIM4-201ENST00000307106 CHMP1AQ9HD42 196 aaPredicted RBP8.68□□□□□ -1.02
SMIM4-201ENST00000307106 TRAV8-7A0A075B6U6 113 aa8.67□□□□□ -1.02
SMIM4-201ENST00000307106 SRRM4A7MD48 611 aaKnown RBP8.67□□□□□ -1.02
SMIM4-201ENST00000307106 DEFB4AO15263 64 aa8.67□□□□□ -1.02
SMIM4-201ENST00000307106 S1PR2O95136 353 aa8.67□□□□□ -1.02
SMIM4-201ENST00000307106 C8orf88P0DMB2 117 aa8.67□□□□□ -1.02
SMIM4-201ENST00000307106 ATP6AP1Q15904 470 aa8.67□□□□□ -1.02
SMIM4-201ENST00000307106 PRSS8Q16651 343 aa8.67□□□□□ -1.02
SMIM4-201ENST00000307106 ZNF585BQ52M93 769 aa8.67□□□□□ -1.02
SMIM4-201ENST00000307106 XAF1Q6GPH4 301 aa8.67□□□□□ -1.02
SMIM4-201ENST00000307106 ZNF880Q6PDB4 577 aa8.67□□□□□ -1.02
SMIM4-201ENST00000307106 IDO2Q6ZQW0 420 aa8.67□□□□□ -1.02
SMIM4-201ENST00000307106 C6orf201Q7Z4U5 140 aa8.67□□□□□ -1.02
SMIM4-201ENST00000307106 TTC9CQ8N5M4 171 aa8.67□□□□□ -1.02
SMIM4-201ENST00000307106 ZNF645Q8N7E2 425 aa8.67□□□□□ -1.02
SMIM4-201ENST00000307106 OR13C5Q8NGS8 318 aa8.67□□□□□ -1.02
SMIM4-201ENST00000307106 OR5B3Q8NH48 314 aa8.67□□□□□ -1.02
SMIM4-201ENST00000307106 MARC2Q969Z3 335 aa8.67□□□□□ -1.02
SMIM4-201ENST00000307106 PTX4Q96A99 478 aa8.67□□□□□ -1.02
SMIM4-201ENST00000307106 CCDC140Q96MF4 163 aa8.67□□□□□ -1.02
SMIM4-201ENST00000307106 NEDD4LQ96PU5 975 aa8.67□□□□□ -1.02
SMIM4-201ENST00000307106 MRPL27Q9P0M9 148 aaKnown RBP8.67□□□□□ -1.02
SMIM4-201ENST00000307106 CKLFQ9UBR5 152 aa8.67□□□□□ -1.02
SMIM4-201ENST00000307106 S4R3C0 116 aa8.67□□□□□ -1.02
SMIM4-201ENST00000307106 IGHV4-4A0A075B6R2 117 aa8.66□□□□□ -1.02
SMIM4-201ENST00000307106 MPTX1A8MV57 137 aa8.66□□□□□ -1.02
SMIM4-201ENST00000307106 NAPSAO96009 420 aa8.66□□□□□ -1.02
SMIM4-201ENST00000307106 SCTP09683 121 aa8.66□□□□□ -1.02
SMIM4-201ENST00000307106 SNRPGP62308 76 aaKnown RBP8.66□□□□□ -1.02
SMIM4-201ENST00000307106 CBX3Q13185 183 aa8.66□□□□□ -1.02
SMIM4-201ENST00000307106 VMA21Q3ZAQ7 101 aa8.66□□□□□ -1.02
SMIM4-201ENST00000307106 RPL22L1Q6P5R6 122 aaKnown RBP8.66□□□□□ -1.02
SMIM4-201ENST00000307106 UNQ9165/PRO28630Q6UXU0 137 aa8.66□□□□□ -1.02
SMIM4-201ENST00000307106 MOB1BQ7L9L4 216 aa8.66□□□□□ -1.02
SMIM4-201ENST00000307106 TEX45Q8NA69 505 aa8.66□□□□□ -1.02
SMIM4-201ENST00000307106 SPIN2AQ99865 258 aa8.66□□□□□ -1.02
SMIM4-201ENST00000307106 SPIN2BQ9BPZ2 258 aa8.66□□□□□ -1.02
SMIM4-201ENST00000307106 CSTL1Q9H114 145 aa8.66□□□□□ -1.02
SMIM4-201ENST00000307106 C5orf66Q9H5L9 145 aa8.66□□□□□ -1.02
SMIM4-201ENST00000307106 AASSQ9UDR5 926 aa8.66□□□□□ -1.02
SMIM4-201ENST00000307106 TSPAN4O14817 238 aa8.65□□□□□ -1.02
SMIM4-201ENST00000307106 CDK2AP2O75956 126 aa8.65□□□□□ -1.02
SMIM4-201ENST00000307106 ACTL6BO94805 426 aa8.65□□□□□ -1.02
SMIM4-201ENST00000307106 HLA-DRB3P79483 266 aa8.65□□□□□ -1.02
SMIM4-201ENST00000307106 MED21Q13503 144 aa8.65□□□□□ -1.02
SMIM4-201ENST00000307106 RTL8BQ17RB0 113 aa8.65□□□□□ -1.02
SMIM4-201ENST00000307106 CCDC58Q4VC31 144 aa8.65□□□□□ -1.02
SMIM4-201ENST00000307106 PVRIGQ6DKI7 326 aa8.65□□□□□ -1.02
SMIM4-201ENST00000307106 AMIGO2Q86SJ2 522 aa8.65□□□□□ -1.02
SMIM4-201ENST00000307106 SLC25A42Q86VD7 318 aa8.65□□□□□ -1.02
SMIM4-201ENST00000307106 NR2C2APQ86WQ0 139 aa8.65□□□□□ -1.02
SMIM4-201ENST00000307106 POM121L12Q8N7R1 296 aa8.65□□□□□ -1.02
SMIM4-201ENST00000307106 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.65□□□□□ -1.02
SMIM4-201ENST00000307106 CD300LFQ8TDQ1 290 aa8.65□□□□□ -1.02
SMIM4-201ENST00000307106 C6orf62Q9GZU0 229 aaPredicted RBP8.65□□□□□ -1.02
SMIM4-201ENST00000307106 POMPQ9Y244 141 aa8.65□□□□□ -1.02
SMIM4-201ENST00000307106 ZNF257Q9Y2Q1 563 aa8.65□□□□□ -1.02
SMIM4-201ENST00000307106 NACAE9PAV3 2078 aa8.65□□□□□ -1.03
SMIM4-201ENST00000307106 DYNC1I1O14576 645 aa8.64□□□□□ -1.03
SMIM4-201ENST00000307106 UBE2KP61086 200 aa8.64□□□□□ -1.03
SMIM4-201ENST00000307106 LGALS9BQ3B8N2 356 aa8.64□□□□□ -1.03
SMIM4-201ENST00000307106 C10orf55Q5SWW7 151 aa8.64□□□□□ -1.03
SMIM4-201ENST00000307106 C19orf35Q6ZS72 473 aa8.64□□□□□ -1.03
SMIM4-201ENST00000307106 APRG1Q8IVJ8 170 aa8.64□□□□□ -1.03
SMIM4-201ENST00000307106 CDH26Q8IXH8 852 aa8.64□□□□□ -1.03
SMIM4-201ENST00000307106 SETD9Q8NE22 299 aa8.64□□□□□ -1.03
SMIM4-201ENST00000307106 OR4A5Q8NH83 315 aa8.64□□□□□ -1.03
SMIM4-201ENST00000307106 EEF1AKMT3Q96AZ1 226 aa8.64□□□□□ -1.03
SMIM4-201ENST00000307106 HRH4Q9H3N8 390 aa8.64□□□□□ -1.03
SMIM4-201ENST00000307106 ZNF430Q9H8G1 570 aaPredicted RBP8.64□□□□□ -1.03
SMIM4-201ENST00000307106 AMBNQ9NP70 447 aa8.64□□□□□ -1.03
SMIM4-201ENST00000307106 ZNF446Q9NWS9 450 aa8.64□□□□□ -1.03
SMIM4-201ENST00000307106 TRBV5-5A0A0J9YX44 114 aa8.63□□□□□ -1.03
SMIM4-201ENST00000307106 A0A1W2PPK0 400 aa8.63□□□□□ -1.03
SMIM4-201ENST00000307106 HMX3A6NHT5 357 aa8.63□□□□□ -1.03
SMIM4-201ENST00000307106 LIMS3P0CW19 117 aa8.63□□□□□ -1.03
SMIM4-201ENST00000307106 LIMS4P0CW20 117 aa8.63□□□□□ -1.03
SMIM4-201ENST00000307106 P0DMU3 169 aa8.63□□□□□ -1.03
SMIM4-201ENST00000307106 FAM231AP0DMU4 169 aa8.63□□□□□ -1.03
SMIM4-201ENST00000307106 FAM231CP0DMU5 169 aa8.63□□□□□ -1.03
SMIM4-201ENST00000307106 GALP22466 123 aa8.63□□□□□ -1.03
SMIM4-201ENST00000307106 ADMP35318 185 aa8.63□□□□□ -1.03
SMIM4-201ENST00000307106 ELLP55199 621 aaPredicted RBP8.63□□□□□ -1.03
SMIM4-201ENST00000307106 TAGLNQ01995 201 aaKnown RBP8.63□□□□□ -1.03
SMIM4-201ENST00000307106 Q499Y3 187 aa8.63□□□□□ -1.03
SMIM4-201ENST00000307106 CEACAM19Q7Z692 300 aa8.63□□□□□ -1.03
SMIM4-201ENST00000307106 OR52I1Q8NGK6 324 aa8.63□□□□□ -1.03
SMIM4-201ENST00000307106 SMIM19Q96E16 107 aa8.63□□□□□ -1.03
SMIM4-201ENST00000307106 MED4Q9NPJ6 270 aa8.63□□□□□ -1.03
SMIM4-201ENST00000307106 SDHAF2Q9NX18 166 aa8.63□□□□□ -1.03
SMIM4-201ENST00000307106 RDH8Q9NYR8 311 aa8.63□□□□□ -1.03
SMIM4-201ENST00000307106 UFC1Q9Y3C8 167 aa8.63□□□□□ -1.03
SMIM4-201ENST00000307106 TRBV6-6A0A0A6YYG2 114 aa8.62□□□□□ -1.03
SMIM4-201ENST00000307106 TRAV10A0A0B4J240 114 aa8.62□□□□□ -1.03
SMIM4-201ENST00000307106 OR4C46A6NHA9 309 aa8.62□□□□□ -1.03
SMIM4-201ENST00000307106 CREBL2O60519 120 aaPredicted RBP8.62□□□□□ -1.03
SMIM4-201ENST00000307106 CRYZL1O95825 349 aa8.62□□□□□ -1.03
SMIM4-201ENST00000307106 GSTT2P0CG29 244 aa8.62□□□□□ -1.03
SMIM4-201ENST00000307106 GSTT2BP0CG30 244 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms