RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.75□□□□□ -1.17
PTPRE-202ENST00000306042 C8orf46Q8TAG6 207 aa7.75□□□□□ -1.17
PTPRE-202ENST00000306042 RBM14Q96PK6 669 aaKnown RBP7.75□□□□□ -1.17
PTPRE-202ENST00000306042 RBM38Q9H0Z9 239 aaKnown RBP7.75□□□□□ -1.17
PTPRE-202ENST00000306042 FBXL15Q9H469 300 aa7.75□□□□□ -1.17
PTPRE-202ENST00000306042 OPN4Q9UHM6 478 aa7.75□□□□□ -1.17
PTPRE-202ENST00000306042 A0A1W2PS18 150 aa7.75□□□□□ -1.17
PTPRE-202ENST00000306042 TCF21O43680 179 aa7.75□□□□□ -1.17
PTPRE-202ENST00000306042 TRGV3P03979 118 aa7.75□□□□□ -1.17
PTPRE-202ENST00000306042 SOHLH1Q5JUK2 328 aa7.75□□□□□ -1.17
PTPRE-202ENST00000306042 PLPPR1Q8TBJ4 325 aa7.75□□□□□ -1.17
PTPRE-202ENST00000306042 BLNKQ8WV28 456 aa7.75□□□□□ -1.17
PTPRE-202ENST00000306042 SLC25A33Q9BSK2 321 aa7.75□□□□□ -1.17
PTPRE-202ENST00000306042 SLC6A1P30531 599 aa7.75□□□□□ -1.17
PTPRE-202ENST00000306042 VDAC2P45880 294 aaPredicted RBP7.75□□□□□ -1.17
PTPRE-202ENST00000306042 TMEM155Q4W5P6 130 aa7.75□□□□□ -1.17
PTPRE-202ENST00000306042 HIST2H3PS2Q5TEC6 136 aa7.75□□□□□ -1.17
PTPRE-202ENST00000306042 PDPNQ86YL7 162 aa7.75□□□□□ -1.17
PTPRE-202ENST00000306042 MITD1Q8WV92 249 aa7.75□□□□□ -1.17
PTPRE-202ENST00000306042 LILRA1O75019 489 aa7.74□□□□□ -1.17
PTPRE-202ENST00000306042 KBTBD11O94819 623 aa7.74□□□□□ -1.17
PTPRE-202ENST00000306042 C1QBP02746 253 aa7.74□□□□□ -1.17
PTPRE-202ENST00000306042 MSMBP08118 114 aa7.74□□□□□ -1.17
PTPRE-202ENST00000306042 SPP1P10451 314 aa7.74□□□□□ -1.17
PTPRE-202ENST00000306042 ID1P41134 155 aa7.74□□□□□ -1.17
PTPRE-202ENST00000306042 HIST1H3AP68431 136 aa7.74□□□□□ -1.17
PTPRE-202ENST00000306042 PLAURQ03405 335 aa7.74□□□□□ -1.17
PTPRE-202ENST00000306042 HABP2Q14520 560 aaPredicted RBP7.74□□□□□ -1.17
PTPRE-202ENST00000306042 HIST2H3AQ71DI3 136 aa7.74□□□□□ -1.17
PTPRE-202ENST00000306042 FGFRL1Q8N441 504 aa7.74□□□□□ -1.17
PTPRE-202ENST00000306042 OSR1Q8TAX0 266 aaPredicted RBP7.74□□□□□ -1.17
PTPRE-202ENST00000306042 C17orf50Q8WW18 174 aa7.74□□□□□ -1.17
PTPRE-202ENST00000306042 ITLN2Q8WWU7 325 aaPredicted RBP7.74□□□□□ -1.17
PTPRE-202ENST00000306042 RNF2Q99496 336 aa7.74□□□□□ -1.17
PTPRE-202ENST00000306042 PNRC2Q9NPJ4 139 aaKnown RBP7.74□□□□□ -1.17
PTPRE-202ENST00000306042 PUS1Q9Y606 427 aaKnown RBP eCLIP7.74□□□□□ -1.17
PTPRE-202ENST00000306042 U3KQ87 197 aa7.74□□□□□ -1.17
PTPRE-202ENST00000306042 XKRY2A2RUG3 117 aa7.74□□□□□ -1.17
PTPRE-202ENST00000306042 MFAP4P55083 255 aa7.74□□□□□ -1.17
PTPRE-202ENST00000306042 HSD17B13Q7Z5P4 300 aaPredicted RBP7.74□□□□□ -1.17
PTPRE-202ENST00000306042 Q8NA96 180 aa7.74□□□□□ -1.17
PTPRE-202ENST00000306042 OR4D10Q8NGI6 311 aa7.74□□□□□ -1.17
PTPRE-202ENST00000306042 SSMEM1Q8WWF3 244 aa7.74□□□□□ -1.17
PTPRE-202ENST00000306042 LSM10Q969L4 123 aaKnown RBP7.74□□□□□ -1.17
PTPRE-202ENST00000306042 MCRIP2Q9BUT9 160 aaKnown RBP7.74□□□□□ -1.17
PTPRE-202ENST00000306042 TMEM222Q9H0R3 208 aa7.74□□□□□ -1.17
PTPRE-202ENST00000306042 ELF5Q9UKW6 265 aaPredicted RBP7.74□□□□□ -1.17
PTPRE-202ENST00000306042 HEATR5AQ86XA9 2040 aa7.74□□□□□ -1.17
PTPRE-202ENST00000306042 ANKHD1Q8IWZ3 2542 aaKnown RBP7.74□□□□□ -1.17
PTPRE-202ENST00000306042 A0A0G2JLM5 398 aa7.74□□□□□ -1.17
PTPRE-202ENST00000306042 A0A1W2PRX2 142 aa7.74□□□□□ -1.17
PTPRE-202ENST00000306042 MPC2O95563 127 aa7.74□□□□□ -1.17
PTPRE-202ENST00000306042 CNN1P51911 297 aaKnown RBP7.74□□□□□ -1.17
PTPRE-202ENST00000306042 HSPE1P61604 102 aaKnown RBP7.74□□□□□ -1.17
PTPRE-202ENST00000306042 ADORA2A-AS1P86434 159 aa7.74□□□□□ -1.17
PTPRE-202ENST00000306042 OR5I1Q13606 314 aa7.74□□□□□ -1.17
PTPRE-202ENST00000306042 VMO1Q7Z5L0 202 aa7.74□□□□□ -1.17
PTPRE-202ENST00000306042 OR4X1Q8NH49 305 aa7.74□□□□□ -1.17
PTPRE-202ENST00000306042 GPHA2Q96T91 129 aa7.74□□□□□ -1.17
PTPRE-202ENST00000306042 RPUSD1Q9UJJ7 312 aaKnown RBP7.74□□□□□ -1.17
PTPRE-202ENST00000306042 DKK1O94907 266 aa7.74□□□□□ -1.17
PTPRE-202ENST00000306042 SELLP14151 372 aa7.74□□□□□ -1.17
PTPRE-202ENST00000306042 IGFBP3P17936 291 aaPredicted RBP7.74□□□□□ -1.17
PTPRE-202ENST00000306042 TFPI2P48307 235 aa7.74□□□□□ -1.17
PTPRE-202ENST00000306042 PRSS54Q6PEW0 395 aa7.74□□□□□ -1.17
PTPRE-202ENST00000306042 Q6ZNX1 250 aa7.74□□□□□ -1.17
PTPRE-202ENST00000306042 LINC00052Q96N35 136 aa7.74□□□□□ -1.17
PTPRE-202ENST00000306042 DMRTA2Q96SC8 542 aa7.74□□□□□ -1.17
PTPRE-202ENST00000306042 PFDN5Q99471 154 aa7.74□□□□□ -1.17
PTPRE-202ENST00000306042 SSX3Q99909 188 aa7.74□□□□□ -1.17
PTPRE-202ENST00000306042 RPS10P5Q9NQ39 176 aa7.74□□□□□ -1.17
PTPRE-202ENST00000306042 PLSCR2Q9NRY7 297 aa7.74□□□□□ -1.17
PTPRE-202ENST00000306042 VSIG4Q9Y279 399 aa7.74□□□□□ -1.17
PTPRE-202ENST00000306042 SPTBN4Q9H254 2564 aa7.74□□□□□ -1.17
PTPRE-202ENST00000306042 LRRC75BQ2VPJ9 315 aa7.73□□□□□ -1.17
PTPRE-202ENST00000306042 ANKRD55Q3KP44 614 aa7.73□□□□□ -1.17
PTPRE-202ENST00000306042 OVCH2Q7RTZ1 564 aa7.73□□□□□ -1.17
PTPRE-202ENST00000306042 BIVMQ86UB2 503 aa7.73□□□□□ -1.17
PTPRE-202ENST00000306042 EEF1AKMT3Q96AZ1 226 aa7.73□□□□□ -1.17
PTPRE-202ENST00000306042 METTL26Q96S19 204 aa7.73□□□□□ -1.17
PTPRE-202ENST00000306042 NIPSNAP3BQ9BS92 247 aa7.73□□□□□ -1.17
PTPRE-202ENST00000306042 MRPL20Q9BYC9 149 aaKnown RBP7.73□□□□□ -1.17
PTPRE-202ENST00000306042 CLEC5AQ9NY25 188 aa7.73□□□□□ -1.17
PTPRE-202ENST00000306042 UMAD1C9J7I0 102 aa7.73□□□□□ -1.17
PTPRE-202ENST00000306042 S1PR2O95136 353 aa7.73□□□□□ -1.17
PTPRE-202ENST00000306042 SLC25A5P05141 298 aaKnown RBP7.73□□□□□ -1.17
PTPRE-202ENST00000306042 GALR1P47211 349 aa7.73□□□□□ -1.17
PTPRE-202ENST00000306042 RAB5CP51148 216 aa7.73□□□□□ -1.17
PTPRE-202ENST00000306042 TDGF1P3P51864 188 aa7.73□□□□□ -1.17
PTPRE-202ENST00000306042 RPS11P62280 158 aaKnown RBP eCLIP7.73□□□□□ -1.17
PTPRE-202ENST00000306042 BRD3OSQ6XYD6 125 aa7.73□□□□□ -1.17
PTPRE-202ENST00000306042 CADM3Q8N126 398 aa7.73□□□□□ -1.17
PTPRE-202ENST00000306042 TEPPQ6URK8 271 aa7.73□□□□□ -1.17
PTPRE-202ENST00000306042 BTNL8Q6UX41 500 aa7.73□□□□□ -1.17
PTPRE-202ENST00000306042 PPP1R27Q86WC6 154 aa7.73□□□□□ -1.17
PTPRE-202ENST00000306042 VKORC1L1Q8N0U8 176 aa7.73□□□□□ -1.17
PTPRE-202ENST00000306042 MMP26Q9NRE1 261 aa7.73□□□□□ -1.17
PTPRE-202ENST00000306042 KIAA1549LQ6ZVL6 1849 aa7.73□□□□□ -1.17
PTPRE-202ENST00000306042 SOX15O60248 233 aa7.73□□□□□ -1.17
PTPRE-202ENST00000306042 ADIRFQ15847 76 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms