RNA–Protein interactions for RNA: ENST00000302787.2

LETM1-201, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETM1, Length 5,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-201ENST00000302787 RND2P52198 227 aa17.99■□□□□ 0.47
LETM1-201ENST00000302787 LEAP2Q969E1 77 aa17.99■□□□□ 0.47
LETM1-201ENST00000302787 C2orf68Q2NKX9 166 aa17.99■□□□□ 0.47
LETM1-201ENST00000302787 TMEM45BQ96B21 275 aa17.99■□□□□ 0.47
LETM1-201ENST00000302787 TM2D1Q9BX74 207 aa17.99■□□□□ 0.47
LETM1-201ENST00000302787 ZFP30Q9Y2G7 519 aa17.99■□□□□ 0.47
LETM1-201ENST00000302787 BRCA1P38398 1863 aaKnown RBP17.99■□□□□ 0.47
LETM1-201ENST00000302787 ANKRD36A6QL64 1941 aa17.99■□□□□ 0.47
LETM1-201ENST00000302787 AGAP20933 346 aa17.99■□□□□ 0.47
LETM1-201ENST00000302787 C5orf52A6NGY3 159 aa17.99■□□□□ 0.47
LETM1-201ENST00000302787 NEUROG3Q9Y4Z2 214 aa17.99■□□□□ 0.47
LETM1-201ENST00000302787 HLA-DQA1P01909 254 aa17.98■□□□□ 0.47
LETM1-201ENST00000302787 NAT2P11245 290 aa17.98■□□□□ 0.47
LETM1-201ENST00000302787 SSTR5P35346 364 aa17.98■□□□□ 0.47
LETM1-201ENST00000302787 OR4A5Q8NH83 315 aa17.98■□□□□ 0.47
LETM1-201ENST00000302787 CDC42EP3Q9UKI2 254 aa17.98■□□□□ 0.47
LETM1-201ENST00000302787 ZNF646O15015 1829 aaPredicted RBP17.98■□□□□ 0.47
LETM1-201ENST00000302787 TGIF1Q15583 401 aa17.98■□□□□ 0.47
LETM1-201ENST00000302787 PPP1R32Q7Z5V6 425 aa17.98■□□□□ 0.47
LETM1-201ENST00000302787 WFDC3Q8IUB2 231 aa17.98■□□□□ 0.47
LETM1-201ENST00000302787 MSGN1A6NI15 193 aa17.98■□□□□ 0.47
LETM1-201ENST00000302787 COLQQ9Y215 455 aaPredicted RBP17.98■□□□□ 0.47
LETM1-201ENST00000302787 TCF19Q9Y242 345 aa17.98■□□□□ 0.47
LETM1-201ENST00000302787 CTSSP25774 331 aa17.97■□□□□ 0.47
LETM1-201ENST00000302787 KIR2DL2P43627 348 aaPredicted RBP17.97■□□□□ 0.47
LETM1-201ENST00000302787 LINC00470Q9BZP3 86 aa17.97■□□□□ 0.47
LETM1-201ENST00000302787 SRSF9Q13242 221 aaKnown RBP eCLIP17.97■□□□□ 0.47
LETM1-201ENST00000302787 PARLQ9H300 379 aa17.97■□□□□ 0.47
LETM1-201ENST00000302787 SLC25A17O43808 307 aa17.97■□□□□ 0.47
LETM1-201ENST00000302787 ATP1A1-AS1Q5TC04 95 aa17.97■□□□□ 0.47
LETM1-201ENST00000302787 VKORC1L1Q8N0U8 176 aa17.97■□□□□ 0.47
LETM1-201ENST00000302787 QTRT1Q9BXR0 403 aaKnown RBP17.97■□□□□ 0.47
LETM1-201ENST00000302787 DNAJC4Q9NNZ3 241 aa17.97■□□□□ 0.47
LETM1-201ENST00000302787 AMY1AP04745 511 aa17.97■□□□□ 0.47
LETM1-201ENST00000302787 RFPL3SP0C7P2 107 aa17.97■□□□□ 0.47
LETM1-201ENST00000302787 C8orf88P0DMB2 117 aa17.97■□□□□ 0.47
LETM1-201ENST00000302787 COL5A1-AS1Q5SY13 56 aa17.97■□□□□ 0.47
LETM1-201ENST00000302787 LINC00518Q8N0U6 118 aa17.97■□□□□ 0.47
LETM1-201ENST00000302787 ABHD12Q8N2K0 398 aa17.97■□□□□ 0.47
LETM1-201ENST00000302787 HSPB7Q9UBY9 170 aa17.97■□□□□ 0.47
LETM1-201ENST00000302787 NUBP1P53384 320 aa17.96■□□□□ 0.47
LETM1-201ENST00000302787 FXYD3Q14802 87 aa17.96■□□□□ 0.47
LETM1-201ENST00000302787 ATG101Q9BSB4 218 aa17.96■□□□□ 0.47
LETM1-201ENST00000302787 hCG_38984A0A1B0GV85 526 aa17.96■□□□□ 0.47
LETM1-201ENST00000302787 NR2C2APQ86WQ0 139 aa17.96■□□□□ 0.47
LETM1-201ENST00000302787 XIRP1Q702N8 1843 aaKnown RBP17.96■□□□□ 0.47
LETM1-201ENST00000302787 SYNGR3O43761 229 aa17.96■□□□□ 0.47
LETM1-201ENST00000302787 RELBQ01201 579 aa17.96■□□□□ 0.47
LETM1-201ENST00000302787 SPATA45Q537H7 98 aa17.96■□□□□ 0.47
LETM1-201ENST00000302787 FGF11Q92914 225 aa17.96■□□□□ 0.47
LETM1-201ENST00000302787 SPSB4Q96A44 273 aa17.96■□□□□ 0.47
LETM1-201ENST00000302787 DOCK3Q8IZD9 2030 aa17.96■□□□□ 0.47
LETM1-201ENST00000302787 ZNF841Q6ZN19 808 aa17.96■□□□□ 0.47
LETM1-201ENST00000302787 OR51M1Q9H341 326 aa17.96■□□□□ 0.47
LETM1-201ENST00000302787 PIKFYVEQ9Y2I7 2098 aa17.96■□□□□ 0.47
LETM1-201ENST00000302787 ID1P41134 155 aa17.95■□□□□ 0.46
LETM1-201ENST00000302787 CDX1P47902 265 aaPredicted RBP17.95■□□□□ 0.46
LETM1-201ENST00000302787 SLC25A53Q5H9E4 307 aa17.95■□□□□ 0.46
LETM1-201ENST00000302787 PSMG3Q9BT73 122 aaPredicted RBP17.95■□□□□ 0.46
LETM1-201ENST00000302787 GPR61Q9BZJ8 451 aa17.95■□□□□ 0.46
LETM1-201ENST00000302787 RALGAPA2Q2PPJ7 1873 aa17.95■□□□□ 0.46
LETM1-201ENST00000302787 PATJQ8NI35 1801 aa17.95■□□□□ 0.46
LETM1-201ENST00000302787 MYOFQ9NZM1 2061 aa17.95■□□□□ 0.46
LETM1-201ENST00000302787 CABIN1Q9Y6J0 2220 aa17.95■□□□□ 0.46
LETM1-201ENST00000302787 OR4C46A6NHA9 309 aa17.95■□□□□ 0.46
LETM1-201ENST00000302787 KBTBD11O94819 623 aa17.95■□□□□ 0.46
LETM1-201ENST00000302787 CRYBB3P26998 211 aa17.95■□□□□ 0.46
LETM1-201ENST00000302787 TCTAP57738 103 aa17.95■□□□□ 0.46
LETM1-201ENST00000302787 RTBDNQ9BSG5 229 aaPredicted RBP17.95■□□□□ 0.46
LETM1-201ENST00000302787 KLF7O75840 302 aaPredicted RBP17.95■□□□□ 0.46
LETM1-201ENST00000302787 NMUP48645 174 aa17.95■□□□□ 0.46
LETM1-201ENST00000302787 PSME4Q14997 1843 aa17.94■□□□□ 0.46
LETM1-201ENST00000302787 ZIC3O60481 467 aa17.94■□□□□ 0.46
LETM1-201ENST00000302787 TRGC1P0CF51 173 aa17.94■□□□□ 0.46
LETM1-201ENST00000302787 LOXL3P58215 753 aa17.94■□□□□ 0.46
LETM1-201ENST00000302787 ZNF506Q5JVG8 444 aa17.94■□□□□ 0.46
LETM1-201ENST00000302787 TIMP4Q99727 224 aa17.94■□□□□ 0.46
LETM1-201ENST00000302787 J3QW42 95 aa17.94■□□□□ 0.46
LETM1-201ENST00000302787 EAF1Q96JC9 268 aaPredicted RBP17.94■□□□□ 0.46
LETM1-201ENST00000302787 TMEM171Q8WVE6 324 aa17.94■□□□□ 0.46
LETM1-201ENST00000302787 EFNB1P98172 346 aa17.94■□□□□ 0.46
LETM1-201ENST00000302787 TMEM78Q5T7P6 136 aa17.94■□□□□ 0.46
LETM1-201ENST00000302787 OR4B1Q8NGF8 309 aa17.94■□□□□ 0.46
LETM1-201ENST00000302787 PGLYRP4Q96LB8 373 aa17.94■□□□□ 0.46
LETM1-201ENST00000302787 NDUFA2O43678 99 aa17.93■□□□□ 0.46
LETM1-201ENST00000302787 FOXJ2Q9P0K8 574 aa17.93■□□□□ 0.46
LETM1-201ENST00000302787 ZNF729A6NN14 1252 aaPredicted RBP17.93■□□□□ 0.46
LETM1-201ENST00000302787 BTCP35070 178 aa17.93■□□□□ 0.46
LETM1-201ENST00000302787 SHISA5Q8N114 240 aa17.93■□□□□ 0.46
LETM1-201ENST00000302787 IFNL4K9M1U5 179 aa17.93■□□□□ 0.46
LETM1-201ENST00000302787 IGFBP3P17936 291 aaPredicted RBP17.93■□□□□ 0.46
LETM1-201ENST00000302787 COTL1Q14019 142 aa17.93■□□□□ 0.46
LETM1-201ENST00000302787 VWCEQ96DN2 955 aa17.93■□□□□ 0.46
LETM1-201ENST00000302787 FAM106CPP0CH98 169 aa17.93■□□□□ 0.46
LETM1-201ENST00000302787 DLX1P56177 255 aa17.93■□□□□ 0.46
LETM1-201ENST00000302787 ZNF207O43670 478 aaKnown RBP17.92■□□□□ 0.46
LETM1-201ENST00000302787 MUC15Q8N387 334 aa17.92■□□□□ 0.46
LETM1-201ENST00000302787 SFXN3Q9BWM7 321 aa17.92■□□□□ 0.46
LETM1-201ENST00000302787 CARHSP1Q9Y2V2 147 aaKnown RBP17.92■□□□□ 0.46
LETM1-201ENST00000302787 SPTBP11277 2137 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms