RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 HSPB7Q9UBY9 170 aa12.19□□□□□ -0.46
CDT1-201ENST00000301019 CTXND1A0A1B0GTU2 59 aa12.19□□□□□ -0.46
CDT1-201ENST00000301019 PRR19A6NJB7 356 aa12.19□□□□□ -0.46
CDT1-201ENST00000301019 C2CD4DB7Z1M9 353 aa12.19□□□□□ -0.46
CDT1-201ENST00000301019 OR52L2PQ8NGH6 319 aa12.19□□□□□ -0.46
CDT1-201ENST00000301019 SSMEM1Q8WWF3 244 aa12.19□□□□□ -0.46
CDT1-201ENST00000301019 TMEM234Q8WY98 164 aa12.19□□□□□ -0.46
CDT1-201ENST00000301019 MOB1AQ9H8S9 216 aa12.19□□□□□ -0.46
CDT1-201ENST00000301019 ICE1Q9Y2F5 2266 aa12.19□□□□□ -0.46
CDT1-201ENST00000301019 TRAV8-6A0A0B4J262 113 aa12.18□□□□□ -0.46
CDT1-201ENST00000301019 A0A1W2PN81 502 aa12.18□□□□□ -0.46
CDT1-201ENST00000301019 TOMM40O96008 361 aa12.18□□□□□ -0.46
CDT1-201ENST00000301019 PRB4P10163 310 aaPredicted RBP12.18□□□□□ -0.46
CDT1-201ENST00000301019 BCL3P20749 454 aa12.18□□□□□ -0.46
CDT1-201ENST00000301019 G6PCP35575 357 aa12.18□□□□□ -0.46
CDT1-201ENST00000301019 TIMP3P35625 211 aa12.18□□□□□ -0.46
CDT1-201ENST00000301019 OR2D3Q8NGH3 330 aa12.18□□□□□ -0.46
CDT1-201ENST00000301019 SSBP4Q9BWG4 385 aaPredicted RBP12.18□□□□□ -0.46
CDT1-201ENST00000301019 MRPL13Q9BYD1 178 aaKnown RBP12.18□□□□□ -0.46
CDT1-201ENST00000301019 TRAF3IP2O43734 574 aaPredicted RBP12.18□□□□□ -0.46
CDT1-201ENST00000301019 UCP1P25874 307 aa12.18□□□□□ -0.46
CDT1-201ENST00000301019 NTSR1P30989 418 aa12.18□□□□□ -0.46
CDT1-201ENST00000301019 SERF2P84101 59 aa12.18□□□□□ -0.46
CDT1-201ENST00000301019 MMD2Q8IY49 270 aa12.18□□□□□ -0.46
CDT1-201ENST00000301019 MRGPRX1Q96LB2 322 aa12.18□□□□□ -0.46
CDT1-201ENST00000301019 RAB40CQ96S21 281 aa12.18□□□□□ -0.46
CDT1-201ENST00000301019 MUC22E2RYF6 1773 aaPredicted RBP12.18□□□□□ -0.46
CDT1-201ENST00000301019 TSPAN2O60636 221 aa12.18□□□□□ -0.46
CDT1-201ENST00000301019 IGKV1-5P01602 117 aa12.18□□□□□ -0.46
CDT1-201ENST00000301019 PPBPP02775 128 aa12.18□□□□□ -0.46
CDT1-201ENST00000301019 PSG9Q00887 426 aa12.18□□□□□ -0.46
CDT1-201ENST00000301019 FOXE3Q13461 319 aa12.18□□□□□ -0.46
CDT1-201ENST00000301019 ZNF776Q68DI1 518 aaPredicted RBP12.18□□□□□ -0.46
CDT1-201ENST00000301019 KLHDC1Q8N7A1 406 aa12.18□□□□□ -0.46
CDT1-201ENST00000301019 PP6455Q8WZ26 134 aa12.18□□□□□ -0.46
CDT1-201ENST00000301019 RAB37Q96AX2 223 aa12.18□□□□□ -0.46
CDT1-201ENST00000301019 GCM1Q9NP62 436 aa12.18□□□□□ -0.46
CDT1-201ENST00000301019 PPIAL4DF5H284 164 aa12.17□□□□□ -0.46
CDT1-201ENST00000301019 ZG16O60844 167 aa12.17□□□□□ -0.46
CDT1-201ENST00000301019 ACTL6BO94805 426 aa12.17□□□□□ -0.46
CDT1-201ENST00000301019 B4GALT1P15291 398 aa12.17□□□□□ -0.46
CDT1-201ENST00000301019 SMAGPQ0VAQ4 97 aa12.17□□□□□ -0.46
CDT1-201ENST00000301019 GTSF1LQ9H1H1 148 aa12.17□□□□□ -0.46
CDT1-201ENST00000301019 UBE2ZQ9H832 354 aaPredicted RBP12.17□□□□□ -0.46
CDT1-201ENST00000301019 C19orf25Q9UFG5 118 aaPredicted RBP12.17□□□□□ -0.46
CDT1-201ENST00000301019 ARFGEF3Q5TH69 2177 aa12.17□□□□□ -0.46
CDT1-201ENST00000301019 OR5B21A6NL26 309 aa12.17□□□□□ -0.46
CDT1-201ENST00000301019 K7EN84 100 aa12.17□□□□□ -0.46
CDT1-201ENST00000301019 K7ERU9 68 aa12.17□□□□□ -0.46
CDT1-201ENST00000301019 HSBP1O75506 76 aa12.17□□□□□ -0.46
CDT1-201ENST00000301019 ARL14EPLP0DKL9 152 aa12.17□□□□□ -0.46
CDT1-201ENST00000301019 COL9A1P20849 921 aa12.17□□□□□ -0.46
CDT1-201ENST00000301019 PRRX1P54821 245 aa12.17□□□□□ -0.46
CDT1-201ENST00000301019 HOXA4Q00056 320 aaPredicted RBP12.17□□□□□ -0.46
CDT1-201ENST00000301019 QTRT1Q9BXR0 403 aaKnown RBP12.17□□□□□ -0.46
CDT1-201ENST00000301019 DYSFO75923 2080 aa12.17□□□□□ -0.46
CDT1-201ENST00000301019 TRAV30A0A087WSZ9 112 aa12.16□□□□□ -0.46
CDT1-201ENST00000301019 A6NCN8 305 aa12.16□□□□□ -0.46
CDT1-201ENST00000301019 APOA2P02652 100 aa12.16□□□□□ -0.46
CDT1-201ENST00000301019 COX5AP20674 150 aa12.16□□□□□ -0.46
CDT1-201ENST00000301019 CAMPP49913 170 aa12.16□□□□□ -0.46
CDT1-201ENST00000301019 GPM6AP51674 278 aa12.16□□□□□ -0.46
CDT1-201ENST00000301019 SPATA12Q7Z6I5 190 aa12.16□□□□□ -0.46
CDT1-201ENST00000301019 LHFPL4Q7Z7J7 247 aa12.16□□□□□ -0.46
CDT1-201ENST00000301019 VASH2Q86V25 355 aa12.16□□□□□ -0.46
CDT1-201ENST00000301019 FAM234AQ9H0X4 552 aa12.16□□□□□ -0.46
CDT1-201ENST00000301019 MTCH1Q9NZJ7 389 aa12.16□□□□□ -0.46
CDT1-201ENST00000301019 YLPM1P49750 1951 aaKnown RBP12.16□□□□□ -0.46
CDT1-201ENST00000301019 IGLC7A0M8Q6 106 aa12.16□□□□□ -0.46
CDT1-201ENST00000301019 M0R296 226 aa12.16□□□□□ -0.46
CDT1-201ENST00000301019 IGHMP01871 453 aa12.16□□□□□ -0.46
CDT1-201ENST00000301019 TNFRSF4P43489 277 aa12.16□□□□□ -0.46
CDT1-201ENST00000301019 KIR2DL1P43626 348 aaPredicted RBP12.16□□□□□ -0.46
CDT1-201ENST00000301019 GRB2P62993 217 aaKnown RBP12.16□□□□□ -0.46
CDT1-201ENST00000301019 KIAA0895LQ68EN5 471 aa12.16□□□□□ -0.46
CDT1-201ENST00000301019 WDR54Q9H977 334 aa12.16□□□□□ -0.46
CDT1-201ENST00000301019 RARRES3Q9UL19 164 aa12.16□□□□□ -0.46
CDT1-201ENST00000301019 FREM1Q5H8C1 2179 aa12.16□□□□□ -0.46
CDT1-201ENST00000301019 M0R2Z0 102 aa12.16□□□□□ -0.46
CDT1-201ENST00000301019 TAX1BP3O14907 124 aa12.16□□□□□ -0.46
CDT1-201ENST00000301019 RAMP3O60896 148 aa12.16□□□□□ -0.46
CDT1-201ENST00000301019 ZNF324O75467 553 aaPredicted RBP12.16□□□□□ -0.46
CDT1-201ENST00000301019 S100GP29377 79 aa12.16□□□□□ -0.46
CDT1-201ENST00000301019 TNXAQ16473 311 aa12.16□□□□□ -0.46
CDT1-201ENST00000301019 CENPVQ7Z7K6 275 aaPredicted RBP12.16□□□□□ -0.46
CDT1-201ENST00000301019 GJC3Q8NFK1 279 aa12.16□□□□□ -0.46
CDT1-201ENST00000301019 CHRDL1Q9BU40 450 aa12.16□□□□□ -0.46
CDT1-201ENST00000301019 CFAP47Q6ZTR5 3102 aa12.15□□□□□ -0.46
CDT1-201ENST00000301019 HSBP1L1C9JCN9 74 aa12.15□□□□□ -0.46
CDT1-201ENST00000301019 RPL31P62899 125 aaKnown RBP12.15□□□□□ -0.46
CDT1-201ENST00000301019 METTL7AQ9H8H3 244 aa12.15□□□□□ -0.46
CDT1-201ENST00000301019 IGHV3-13P01766 116 aa12.15□□□□□ -0.46
CDT1-201ENST00000301019 IGHV3-7P01780 117 aa12.15□□□□□ -0.46
CDT1-201ENST00000301019 SSTR5P35346 364 aa12.15□□□□□ -0.46
CDT1-201ENST00000301019 RBM11P57052 281 aaKnown RBP12.15□□□□□ -0.46
CDT1-201ENST00000301019 LINC00173Q6ZV60 143 aa12.15□□□□□ -0.46
CDT1-201ENST00000301019 OR2T6Q8NHC8 308 aa12.15□□□□□ -0.46
CDT1-201ENST00000301019 RNF212BA8MTL3 300 aa12.15□□□□□ -0.47
CDT1-201ENST00000301019 MLNRO43193 412 aa12.15□□□□□ -0.47
CDT1-201ENST00000301019 MMP23AO75900 390 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms