RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 KMT2CQ8NEZ4 4911 aaKnown RBP17■□□□□ 0.31
SMCO4-201ENST00000298966 C3orf85A0A1B0GTC6 90 aa16.99■□□□□ 0.31
SMCO4-201ENST00000298966 DUXBA0A1W2PPF3 345 aa16.99■□□□□ 0.31
SMCO4-201ENST00000298966 H0Y980 276 aa16.99■□□□□ 0.31
SMCO4-201ENST00000298966 PGLYRP1O75594 196 aaPredicted RBP16.99■□□□□ 0.31
SMCO4-201ENST00000298966 CCL3L1P16619 93 aa16.99■□□□□ 0.31
SMCO4-201ENST00000298966 F2RP25116 425 aa16.99■□□□□ 0.31
SMCO4-201ENST00000298966 H2BFSP57053 126 aa16.99■□□□□ 0.31
SMCO4-201ENST00000298966 LTC4SQ16873 150 aa16.99■□□□□ 0.31
SMCO4-201ENST00000298966 PRAMEF5Q5TYX0 476 aa16.99■□□□□ 0.31
SMCO4-201ENST00000298966 C1orf122Q6ZSJ8 110 aa16.99■□□□□ 0.31
SMCO4-201ENST00000298966 REC114Q7Z4M0 266 aa16.99■□□□□ 0.31
SMCO4-201ENST00000298966 TBC1D26Q86UD7 250 aa16.99■□□□□ 0.31
SMCO4-201ENST00000298966 LINC00311Q8N616 119 aa16.99■□□□□ 0.31
SMCO4-201ENST00000298966 DRAM1Q8N682 238 aa16.99■□□□□ 0.31
SMCO4-201ENST00000298966 ZNF439Q8NDP4 499 aa16.99■□□□□ 0.31
SMCO4-201ENST00000298966 ZNF596Q8TC21 504 aa16.99■□□□□ 0.31
SMCO4-201ENST00000298966 HSD17B10Q99714 261 aaKnown RBP16.99■□□□□ 0.31
SMCO4-201ENST00000298966 PSG11Q9UQ72 335 aa16.99■□□□□ 0.31
SMCO4-201ENST00000298966 PLXNB1O43157 2135 aa16.99■□□□□ 0.31
SMCO4-201ENST00000298966 CENPVL3A0A0U1RRI6 287 aa16.98■□□□□ 0.31
SMCO4-201ENST00000298966 C22orf46C9J442 243 aa16.98■□□□□ 0.31
SMCO4-201ENST00000298966 TOX4O94842 621 aa16.98■□□□□ 0.31
SMCO4-201ENST00000298966 IGHV4-59P01825 116 aa16.98■□□□□ 0.31
SMCO4-201ENST00000298966 IGHV1-8P0DP01 117 aa16.98■□□□□ 0.31
SMCO4-201ENST00000298966 NFYBP25208 207 aa16.98■□□□□ 0.31
SMCO4-201ENST00000298966 GPR12P47775 334 aa16.98■□□□□ 0.31
SMCO4-201ENST00000298966 ERVFRD-1P60508 538 aa16.98■□□□□ 0.31
SMCO4-201ENST00000298966 TMEM187Q14656 261 aa16.98■□□□□ 0.31
SMCO4-201ENST00000298966 LIAT1Q6ZQX7 453 aa16.98■□□□□ 0.31
SMCO4-201ENST00000298966 SLC25A48Q6ZT89 311 aaKnown RBP16.98■□□□□ 0.31
SMCO4-201ENST00000298966 LGI3Q8N145 548 aa16.98■□□□□ 0.31
SMCO4-201ENST00000298966 IL22RA2Q969J5 263 aa16.98■□□□□ 0.31
SMCO4-201ENST00000298966 HYLS1Q96M11 299 aa16.98■□□□□ 0.31
SMCO4-201ENST00000298966 RAB29O14966 203 aa16.97■□□□□ 0.31
SMCO4-201ENST00000298966 IGLV2-14P01704 120 aa16.97■□□□□ 0.31
SMCO4-201ENST00000298966 UCP1P25874 307 aa16.97■□□□□ 0.31
SMCO4-201ENST00000298966 KPRPQ5T749 579 aaPredicted RBP16.97■□□□□ 0.31
SMCO4-201ENST00000298966 FAM71F2Q6NXP2 309 aa16.97■□□□□ 0.31
SMCO4-201ENST00000298966 Q6ZSV7 163 aa16.97■□□□□ 0.31
SMCO4-201ENST00000298966 OR2T35Q8NGX2 323 aa16.97■□□□□ 0.31
SMCO4-201ENST00000298966 OR9G1Q8NH87 305 aa16.97■□□□□ 0.31
SMCO4-201ENST00000298966 ADTRPQ96IZ2 230 aa16.97■□□□□ 0.31
SMCO4-201ENST00000298966 TBX15Q96SF7 602 aa16.97■□□□□ 0.31
SMCO4-201ENST00000298966 PARP12Q9H0J9 701 aaKnown RBP16.97■□□□□ 0.31
SMCO4-201ENST00000298966 TMEM222Q9H0R3 208 aa16.97■□□□□ 0.31
SMCO4-201ENST00000298966 IFI27L2Q9H2X8 130 aa16.97■□□□□ 0.31
SMCO4-201ENST00000298966 C16orf95Q9H693 158 aa16.97■□□□□ 0.31
SMCO4-201ENST00000298966 IGHV1-69DA0A0B4J2H0 117 aa16.96■□□□□ 0.31
SMCO4-201ENST00000298966 MEX3AA1L020 520 aaKnown RBP16.96■□□□□ 0.31
SMCO4-201ENST00000298966 ST8SIA5O15466 376 aa16.96■□□□□ 0.31
SMCO4-201ENST00000298966 IGHV1-69P01742 117 aa16.96■□□□□ 0.31
SMCO4-201ENST00000298966 PRB2P02812 416 aaPredicted RBP16.96■□□□□ 0.31
SMCO4-201ENST00000298966 OR5AC1P0C628 307 aa16.96■□□□□ 0.31
SMCO4-201ENST00000298966 RPA2P15927 270 aa16.96■□□□□ 0.31
SMCO4-201ENST00000298966 IER3P46695 156 aa16.96■□□□□ 0.31
SMCO4-201ENST00000298966 TMEM133Q9H2Q1 129 aa16.96■□□□□ 0.31
SMCO4-201ENST00000298966 KPTNQ9Y664 436 aa16.96■□□□□ 0.31
SMCO4-201ENST00000298966 SIX6O95475 246 aa16.95■□□□□ 0.3
SMCO4-201ENST00000298966 IFNA21P01568 189 aa16.95■□□□□ 0.3
SMCO4-201ENST00000298966 MMP9P14780 707 aa16.95■□□□□ 0.3
SMCO4-201ENST00000298966 IL3RAP26951 378 aa16.95■□□□□ 0.3
SMCO4-201ENST00000298966 CYCSP99999 105 aaKnown RBP16.95■□□□□ 0.3
SMCO4-201ENST00000298966 CT45A1Q5HYN5 189 aa16.95■□□□□ 0.3
SMCO4-201ENST00000298966 SAMD5Q5TGI4 173 aa16.95■□□□□ 0.3
SMCO4-201ENST00000298966 DHRS7BQ6IAN0 325 aaPredicted RBP16.95■□□□□ 0.3
SMCO4-201ENST00000298966 GSG1LQ6UXU4 331 aa16.95■□□□□ 0.3
SMCO4-201ENST00000298966 C11orf42Q8N5U0 333 aa16.95■□□□□ 0.3
SMCO4-201ENST00000298966 CT45A3Q8NHU0 189 aa16.95■□□□□ 0.3
SMCO4-201ENST00000298966 CD300LFQ8TDQ1 290 aa16.95■□□□□ 0.3
SMCO4-201ENST00000298966 GLYATL2Q8WU03 294 aa16.95■□□□□ 0.3
SMCO4-201ENST00000298966 TMEM56Q96MV1 263 aa16.95■□□□□ 0.3
SMCO4-201ENST00000298966 S1PR3Q99500 378 aa16.95■□□□□ 0.3
SMCO4-201ENST00000298966 SDHAF2Q9NX18 166 aa16.95■□□□□ 0.3
SMCO4-201ENST00000298966 TMEM56-RWDD3S4R434 201 aa16.95■□□□□ 0.3
SMCO4-201ENST00000298966 G3V3Q6 166 aa16.94■□□□□ 0.3
SMCO4-201ENST00000298966 SMLR1H3BR10 107 aa16.94■□□□□ 0.3
SMCO4-201ENST00000298966 MMP23AO75900 390 aa16.94■□□□□ 0.3
SMCO4-201ENST00000298966 ATG12O94817 140 aa16.94■□□□□ 0.3
SMCO4-201ENST00000298966 KIR2DS2P43631 304 aa16.94■□□□□ 0.3
SMCO4-201ENST00000298966 PRRX1P54821 245 aa16.94■□□□□ 0.3
SMCO4-201ENST00000298966 EIF4EBP1Q13541 118 aaPredicted RBP16.94■□□□□ 0.3
SMCO4-201ENST00000298966 MRAPQ8TCY5 172 aa16.94■□□□□ 0.3
SMCO4-201ENST00000298966 LHX4Q969G2 390 aa16.94■□□□□ 0.3
SMCO4-201ENST00000298966 METTL8Q9H825 291 aaKnown RBP16.94■□□□□ 0.3
SMCO4-201ENST00000298966 RNF150Q9ULK6 438 aa16.94■□□□□ 0.3
SMCO4-201ENST00000298966 TMED3Q9Y3Q3 217 aa16.94■□□□□ 0.3
SMCO4-201ENST00000298966 NOTCH3Q9UM47 2321 aa16.94■□□□□ 0.3
SMCO4-201ENST00000298966 A0A0U1RQK1 487 aa16.93■□□□□ 0.3
SMCO4-201ENST00000298966 J3QR06 171 aa16.93■□□□□ 0.3
SMCO4-201ENST00000298966 CCSO14618 274 aa16.93■□□□□ 0.3
SMCO4-201ENST00000298966 CDS2O95674 445 aa16.93■□□□□ 0.3
SMCO4-201ENST00000298966 SERPINE2P07093 398 aa16.93■□□□□ 0.3
SMCO4-201ENST00000298966 ZNF134P52741 427 aa16.93■□□□□ 0.3
SMCO4-201ENST00000298966 TAGLNQ01995 201 aaKnown RBP16.93■□□□□ 0.3
SMCO4-201ENST00000298966 BEND2Q8NDZ0 799 aa16.93■□□□□ 0.3
SMCO4-201ENST00000298966 OR13D1Q8NGV5 346 aa16.93■□□□□ 0.3
SMCO4-201ENST00000298966 ABHD14BQ96IU4 210 aa16.93■□□□□ 0.3
SMCO4-201ENST00000298966 TP53RKQ96S44 253 aa16.93■□□□□ 0.3
SMCO4-201ENST00000298966 TOR1AO14656 332 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms