RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 HSD17B10Q99714 261 aaKnown RBP11.78□□□□□ -0.52
C9orf3-202ENST00000297979 LINC00574Q9H8X3 128 aa11.78□□□□□ -0.52
C9orf3-202ENST00000297979 LINC00312Q9Y6C7 94 aa11.78□□□□□ -0.52
C9orf3-202ENST00000297979 RELNP78509 3460 aa11.78□□□□□ -0.52
C9orf3-202ENST00000297979 CLDN1O95832 211 aa11.78□□□□□ -0.52
C9orf3-202ENST00000297979 MEF2CQ06413 473 aaPredicted RBP11.78□□□□□ -0.52
C9orf3-202ENST00000297979 TMEM30BQ3MIR4 351 aa11.78□□□□□ -0.52
C9orf3-202ENST00000297979 SHISA2Q6UWI4 295 aa11.78□□□□□ -0.52
C9orf3-202ENST00000297979 TCTEX1D1Q8N7M0 179 aa11.78□□□□□ -0.52
C9orf3-202ENST00000297979 DMBX1Q8NFW5 382 aa11.78□□□□□ -0.52
C9orf3-202ENST00000297979 PHYHIPLQ96FC7 376 aa11.78□□□□□ -0.52
C9orf3-202ENST00000297979 CYTL1Q9NRR1 136 aa11.78□□□□□ -0.52
C9orf3-202ENST00000297979 IDI2-AS1Q9NZ38 188 aa11.78□□□□□ -0.52
C9orf3-202ENST00000297979 ARID1AO14497 2285 aa11.77□□□□□ -0.52
C9orf3-202ENST00000297979 NDUFB3O43676 98 aa11.77□□□□□ -0.53
C9orf3-202ENST00000297979 IGKV1-5P01602 117 aa11.77□□□□□ -0.53
C9orf3-202ENST00000297979 LPAR6P43657 344 aa11.77□□□□□ -0.53
C9orf3-202ENST00000297979 P2RY1P47900 373 aa11.77□□□□□ -0.53
C9orf3-202ENST00000297979 LRRC10Q5BKY1 277 aa11.77□□□□□ -0.53
C9orf3-202ENST00000297979 CXorf66Q5JRM2 361 aaPredicted RBP11.77□□□□□ -0.53
C9orf3-202ENST00000297979 HIVEP3Q5T1R4 2406 aa11.77□□□□□ -0.53
C9orf3-202ENST00000297979 TAAR5O14804 337 aa11.77□□□□□ -0.53
C9orf3-202ENST00000297979 KALRNO60229 2985 aa11.77□□□□□ -0.53
C9orf3-202ENST00000297979 TPT1P13693 172 aaKnown RBP11.77□□□□□ -0.53
C9orf3-202ENST00000297979 RAB7AP51149 207 aa11.77□□□□□ -0.53
C9orf3-202ENST00000297979 RPL31P62899 125 aaKnown RBP11.77□□□□□ -0.53
C9orf3-202ENST00000297979 LYPD2Q6UXB3 125 aa11.77□□□□□ -0.53
C9orf3-202ENST00000297979 NUDT10Q8NFP7 164 aa11.77□□□□□ -0.53
C9orf3-202ENST00000297979 ABHD14AQ9BUJ0 271 aa11.77□□□□□ -0.53
C9orf3-202ENST00000297979 IFI27L2Q9H2X8 130 aa11.77□□□□□ -0.53
C9orf3-202ENST00000297979 CBLN4Q9NTU7 201 aa11.77□□□□□ -0.53
C9orf3-202ENST00000297979 KAAG1Q9UBP8 84 aa11.77□□□□□ -0.53
C9orf3-202ENST00000297979 RAMP3O60896 148 aa11.76□□□□□ -0.53
C9orf3-202ENST00000297979 PITX3O75364 302 aa11.76□□□□□ -0.53
C9orf3-202ENST00000297979 FCN3O75636 299 aa11.76□□□□□ -0.53
C9orf3-202ENST00000297979 IGHV3-7P01780 117 aa11.76□□□□□ -0.53
C9orf3-202ENST00000297979 S100A8P05109 93 aa11.76□□□□□ -0.53
C9orf3-202ENST00000297979 PVALBP20472 110 aaPredicted RBP11.76□□□□□ -0.53
C9orf3-202ENST00000297979 ZNF134P52741 427 aa11.76□□□□□ -0.53
C9orf3-202ENST00000297979 ID3Q02535 119 aa11.76□□□□□ -0.53
C9orf3-202ENST00000297979 SPAG16Q8N0X2 631 aa11.76□□□□□ -0.53
C9orf3-202ENST00000297979 GAL3ST2Q9H3Q3 398 aa11.76□□□□□ -0.53
C9orf3-202ENST00000297979 GPR137BO60478 399 aa11.76□□□□□ -0.53
C9orf3-202ENST00000297979 NFYBP25208 207 aa11.76□□□□□ -0.53
C9orf3-202ENST00000297979 NUTF2P61970 127 aaKnown RBP11.76□□□□□ -0.53
C9orf3-202ENST00000297979 GPR157Q5UAW9 335 aa11.76□□□□□ -0.53
C9orf3-202ENST00000297979 MISP3Q96FF7 219 aa11.76□□□□□ -0.53
C9orf3-202ENST00000297979 PACRGQ96M98 296 aaPredicted RBP11.76□□□□□ -0.53
C9orf3-202ENST00000297979 SPXQ9BT56 116 aa11.76□□□□□ -0.53
C9orf3-202ENST00000297979 C11orf1Q9H5F2 150 aa11.76□□□□□ -0.53
C9orf3-202ENST00000297979 CTSZQ9UBR2 303 aa11.76□□□□□ -0.53
C9orf3-202ENST00000297979 LPAR3Q9UBY5 353 aa11.76□□□□□ -0.53
C9orf3-202ENST00000297979 CACNG5Q9UF02 275 aa11.76□□□□□ -0.53
C9orf3-202ENST00000297979 LINC00473A8K010 186 aa11.75□□□□□ -0.53
C9orf3-202ENST00000297979 C17orf98A8MV24 154 aa11.75□□□□□ -0.53
C9orf3-202ENST00000297979 SSSCA1O60232 199 aa11.75□□□□□ -0.53
C9orf3-202ENST00000297979 ZNF816Q0VGE8 651 aaPredicted RBP11.75□□□□□ -0.53
C9orf3-202ENST00000297979 LBHQ53QV2 105 aaPredicted RBP11.75□□□□□ -0.53
C9orf3-202ENST00000297979 PRAMEF5Q5TYX0 476 aa11.75□□□□□ -0.53
C9orf3-202ENST00000297979 LEAP2Q969E1 77 aa11.75□□□□□ -0.53
C9orf3-202ENST00000297979 MAGT1Q9H0U3 335 aa11.75□□□□□ -0.53
C9orf3-202ENST00000297979 UBE2CO00762 179 aa11.75□□□□□ -0.53
C9orf3-202ENST00000297979 DVL1O14640 695 aa11.75□□□□□ -0.53
C9orf3-202ENST00000297979 NXPH3O95157 252 aa11.75□□□□□ -0.53
C9orf3-202ENST00000297979 NMBP08949 121 aa11.75□□□□□ -0.53
C9orf3-202ENST00000297979 COL8A2P25067 703 aa11.75□□□□□ -0.53
C9orf3-202ENST00000297979 S100A7P31151 101 aa11.75□□□□□ -0.53
C9orf3-202ENST00000297979 BRWD1-AS2P59051 145 aa11.75□□□□□ -0.53
C9orf3-202ENST00000297979 IZUMO4Q1ZYL8 232 aa11.75□□□□□ -0.53
C9orf3-202ENST00000297979 UTF1Q5T230 341 aa11.75□□□□□ -0.53
C9orf3-202ENST00000297979 RBMS3Q6XE24 437 aaKnown RBP11.75□□□□□ -0.53
C9orf3-202ENST00000297979 Q6ZRM9 215 aa11.75□□□□□ -0.53
C9orf3-202ENST00000297979 BAP18Q8IXM2 172 aa11.75□□□□□ -0.53
C9orf3-202ENST00000297979 H1FXQ92522 213 aaKnown RBP11.75□□□□□ -0.53
C9orf3-202ENST00000297979 RAB1BQ9H0U4 201 aa11.75□□□□□ -0.53
C9orf3-202ENST00000297979 FBXL17Q9UF56 701 aa11.75□□□□□ -0.53
C9orf3-202ENST00000297979 GOLT1BQ9Y3E0 138 aa11.75□□□□□ -0.53
C9orf3-202ENST00000297979 MMP24Q9Y5R2 645 aa11.75□□□□□ -0.53
C9orf3-202ENST00000297979 LYNX1G3V0Z9 82 aa11.74□□□□□ -0.53
C9orf3-202ENST00000297979 ATG12O94817 140 aa11.74□□□□□ -0.53
C9orf3-202ENST00000297979 LYNX1P0DP58 116 aa11.74□□□□□ -0.53
C9orf3-202ENST00000297979 MMP9P14780 707 aa11.74□□□□□ -0.53
C9orf3-202ENST00000297979 DUTP33316 252 aaKnown RBP11.74□□□□□ -0.53
C9orf3-202ENST00000297979 TMEM33P57088 247 aa11.74□□□□□ -0.53
C9orf3-202ENST00000297979 CT45A1Q5HYN5 189 aa11.74□□□□□ -0.53
C9orf3-202ENST00000297979 C11orf71Q6IPW1 123 aa11.74□□□□□ -0.53
C9orf3-202ENST00000297979 BPIFCQ8NFQ6 507 aa11.74□□□□□ -0.53
C9orf3-202ENST00000297979 OR10A7Q8NGE5 316 aa11.74□□□□□ -0.53
C9orf3-202ENST00000297979 CT45A3Q8NHU0 189 aa11.74□□□□□ -0.53
C9orf3-202ENST00000297979 ZNF714Q96N38 554 aa11.74□□□□□ -0.53
C9orf3-202ENST00000297979 RPUSD1Q9UJJ7 312 aaKnown RBP11.74□□□□□ -0.53
C9orf3-202ENST00000297979 M0R1X1 148 aa11.74□□□□□ -0.53
C9orf3-202ENST00000297979 PROP1O75360 226 aa11.74□□□□□ -0.53
C9orf3-202ENST00000297979 S1PR2O95136 353 aa11.74□□□□□ -0.53
C9orf3-202ENST00000297979 FSTL3O95633 263 aa11.74□□□□□ -0.53
C9orf3-202ENST00000297979 OR2C3Q8N628 320 aa11.74□□□□□ -0.53
C9orf3-202ENST00000297979 ZNF439Q8NDP4 499 aa11.74□□□□□ -0.53
C9orf3-202ENST00000297979 MS4A7Q9GZW8 240 aaPredicted RBP11.74□□□□□ -0.53
C9orf3-202ENST00000297979 SLC25A32Q9H2D1 315 aa11.74□□□□□ -0.53
C9orf3-202ENST00000297979 H7C2Y5 167 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms