RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 PRDM14Q9GZV8 571 aa12.16□□□□□ -0.46
COL1A2-201ENST00000297268 FOXJ2Q9P0K8 574 aa12.16□□□□□ -0.46
COL1A2-201ENST00000297268 GREB1LQ9C091 1923 aaPredicted RBP12.16□□□□□ -0.46
COL1A2-201ENST00000297268 LOC390937A0A1W2PQ73 354 aa12.16□□□□□ -0.46
COL1A2-201ENST00000297268 J3QRE1 110 aa12.16□□□□□ -0.46
COL1A2-201ENST00000297268 ZIC3O60481 467 aa12.16□□□□□ -0.46
COL1A2-201ENST00000297268 SELENOTP62341 195 aa12.16□□□□□ -0.46
COL1A2-201ENST00000297268 RSPO4Q2I0M5 234 aaPredicted RBP12.16□□□□□ -0.46
COL1A2-201ENST00000297268 ASCL5Q7RTU5 278 aa12.16□□□□□ -0.46
COL1A2-201ENST00000297268 SCARF2Q96GP6 870 aaPredicted RBP12.16□□□□□ -0.46
COL1A2-201ENST00000297268 SRXN1Q9BYN0 137 aa12.16□□□□□ -0.46
COL1A2-201ENST00000297268 DLL1O00548 723 aa12.15□□□□□ -0.46
COL1A2-201ENST00000297268 TBX6O95947 436 aaPredicted RBP12.15□□□□□ -0.46
COL1A2-201ENST00000297268 ZNF735P0CB33 412 aa12.15□□□□□ -0.46
COL1A2-201ENST00000297268 IGFBP3P17936 291 aaPredicted RBP12.15□□□□□ -0.46
COL1A2-201ENST00000297268 DRAM1Q8N682 238 aa12.15□□□□□ -0.46
COL1A2-201ENST00000297268 RAB37Q96AX2 223 aa12.15□□□□□ -0.46
COL1A2-201ENST00000297268 FAM90A27PA6NNH2 459 aa12.15□□□□□ -0.46
COL1A2-201ENST00000297268 C8orf88P0DMB2 117 aa12.15□□□□□ -0.46
COL1A2-201ENST00000297268 KRTCAP3Q53RY4 240 aa12.15□□□□□ -0.46
COL1A2-201ENST00000297268 CLDND2Q8NHS1 167 aa12.15□□□□□ -0.46
COL1A2-201ENST00000297268 CCL13Q99616 98 aa12.15□□□□□ -0.46
COL1A2-201ENST00000297268 WNK3Q9BYP7 1800 aa12.15□□□□□ -0.46
COL1A2-201ENST00000297268 HOXB1P14653 301 aaPredicted RBP12.15□□□□□ -0.46
COL1A2-201ENST00000297268 CYP2G1PQ6ZSU1 146 aa12.15□□□□□ -0.46
COL1A2-201ENST00000297268 ABHD12Q8N2K0 398 aa12.15□□□□□ -0.46
COL1A2-201ENST00000297268 DUSP15Q9H1R2 295 aaPredicted RBP12.15□□□□□ -0.46
COL1A2-201ENST00000297268 ZNF236Q9UL36 1845 aa12.15□□□□□ -0.46
COL1A2-201ENST00000297268 RP1P56715 2156 aa12.15□□□□□ -0.47
COL1A2-201ENST00000297268 HSPE1P61604 102 aaKnown RBP12.15□□□□□ -0.47
COL1A2-201ENST00000297268 LCN2P80188 198 aa12.15□□□□□ -0.47
COL1A2-201ENST00000297268 TMEM177Q53S58 311 aa12.15□□□□□ -0.47
COL1A2-201ENST00000297268 C10orf128Q5T292 105 aa12.15□□□□□ -0.47
COL1A2-201ENST00000297268 GCSAMQ8N6F7 178 aa12.15□□□□□ -0.47
COL1A2-201ENST00000297268 RAB1CQ92928 201 aa12.15□□□□□ -0.47
COL1A2-201ENST00000297268 TMEM54Q969K7 222 aa12.15□□□□□ -0.47
COL1A2-201ENST00000297268 OR8B2Q96RD0 313 aa12.15□□□□□ -0.47
COL1A2-201ENST00000297268 PIKFYVEQ9Y2I7 2098 aa12.15□□□□□ -0.47
COL1A2-201ENST00000297268 FGF16O43320 207 aa12.14□□□□□ -0.47
COL1A2-201ENST00000297268 HERPUD1Q15011 391 aa12.14□□□□□ -0.47
COL1A2-201ENST00000297268 F8VVB4 439 aa12.14□□□□□ -0.47
COL1A2-201ENST00000297268 F8VWA3 439 aa12.14□□□□□ -0.47
COL1A2-201ENST00000297268 GAS1P54826 345 aa12.14□□□□□ -0.47
COL1A2-201ENST00000297268 DLX1P56177 255 aa12.14□□□□□ -0.47
COL1A2-201ENST00000297268 MMDQ15546 238 aa12.14□□□□□ -0.47
COL1A2-201ENST00000297268 ZNF430Q9H8G1 570 aaPredicted RBP12.14□□□□□ -0.47
COL1A2-201ENST00000297268 HSPB7Q9UBY9 170 aa12.14□□□□□ -0.47
COL1A2-201ENST00000297268 GCHFRP30047 84 aa12.14□□□□□ -0.47
COL1A2-201ENST00000297268 LRRC75BQ2VPJ9 315 aa12.14□□□□□ -0.47
COL1A2-201ENST00000297268 RIPPLY2Q5TAB7 128 aa12.14□□□□□ -0.47
COL1A2-201ENST00000297268 SPANXN1Q5VSR9 72 aa12.14□□□□□ -0.47
COL1A2-201ENST00000297268 C1orf210Q8IVY1 113 aa12.14□□□□□ -0.47
COL1A2-201ENST00000297268 WDYHV1Q96HA8 205 aa12.14□□□□□ -0.47
COL1A2-201ENST00000297268 RPL8P62917 257 aaKnown RBP12.14□□□□□ -0.47
COL1A2-201ENST00000297268 TMUB1Q9BVT8 246 aa12.14□□□□□ -0.47
COL1A2-201ENST00000297268 SCNM1Q9BWG6 230 aa12.14□□□□□ -0.47
COL1A2-201ENST00000297268 DNAJC4Q9NNZ3 241 aa12.14□□□□□ -0.47
COL1A2-201ENST00000297268 HLA-DRB1P01911 266 aa12.13□□□□□ -0.47
COL1A2-201ENST00000297268 RPL27AP46776 148 aaKnown RBP12.13□□□□□ -0.47
COL1A2-201ENST00000297268 ZNF658BQ4V348 819 aaPredicted RBP12.13□□□□□ -0.47
COL1A2-201ENST00000297268 HCP5Q6MZN7 132 aa12.13□□□□□ -0.47
COL1A2-201ENST00000297268 SDF2L1Q9HCN8 221 aa12.13□□□□□ -0.47
COL1A2-201ENST00000297268 DPRXA6NFQ7 191 aa12.13□□□□□ -0.47
COL1A2-201ENST00000297268 CD3EP07766 207 aa12.13□□□□□ -0.47
COL1A2-201ENST00000297268 CKS2P33552 79 aa12.13□□□□□ -0.47
COL1A2-201ENST00000297268 CENPWQ5EE01 88 aa12.13□□□□□ -0.47
COL1A2-201ENST00000297268 SSBP3Q9BWW4 388 aaPredicted RBP12.13□□□□□ -0.47
COL1A2-201ENST00000297268 RALYQ9UKM9 306 aaKnown RBP12.13□□□□□ -0.47
COL1A2-201ENST00000297268 TCF19Q9Y242 345 aa12.13□□□□□ -0.47
COL1A2-201ENST00000297268 H0YIZ8 118 aa12.13□□□□□ -0.47
COL1A2-201ENST00000297268 BTF3P20290 206 aaKnown RBP12.13□□□□□ -0.47
COL1A2-201ENST00000297268 SPEM2Q0P670 501 aa12.13□□□□□ -0.47
COL1A2-201ENST00000297268 DMRTA1Q5VZB9 504 aa12.13□□□□□ -0.47
COL1A2-201ENST00000297268 VKORC1L1Q8N0U8 176 aa12.13□□□□□ -0.47
COL1A2-201ENST00000297268 ZNF714Q96N38 554 aa12.13□□□□□ -0.47
COL1A2-201ENST00000297268 GFI1Q99684 422 aa12.13□□□□□ -0.47
COL1A2-201ENST00000297268 NPCDR1Q9BY65 106 aa12.13□□□□□ -0.47
COL1A2-201ENST00000297268 RAB1BQ9H0U4 201 aa12.13□□□□□ -0.47
COL1A2-201ENST00000297268 POLR2AP24928 1970 aaKnown RBP12.13□□□□□ -0.47
COL1A2-201ENST00000297268 STPG3Q8N7X2 389 aa12.13□□□□□ -0.47
COL1A2-201ENST00000297268 DEFB124Q8NES8 71 aa12.13□□□□□ -0.47
COL1A2-201ENST00000297268 ZDHHC16Q969W1 377 aa12.13□□□□□ -0.47
COL1A2-201ENST00000297268 ODAMA1E959 279 aa12.12□□□□□ -0.47
COL1A2-201ENST00000297268 UBE2CO00762 179 aa12.12□□□□□ -0.47
COL1A2-201ENST00000297268 GCSHP23434 173 aa12.12□□□□□ -0.47
COL1A2-201ENST00000297268 RND2P52198 227 aa12.12□□□□□ -0.47
COL1A2-201ENST00000297268 ZCCHC14Q8WYQ9 949 aaKnown RBP12.12□□□□□ -0.47
COL1A2-201ENST00000297268 SMIM12Q96EX1 92 aa12.12□□□□□ -0.47
COL1A2-201ENST00000297268 IMMP2LQ96T52 175 aa12.12□□□□□ -0.47
COL1A2-201ENST00000297268 PATE3B3GLJ2 98 aa12.12□□□□□ -0.47
COL1A2-201ENST00000297268 DNLZQ5SXM8 178 aa12.12□□□□□ -0.47
COL1A2-201ENST00000297268 NEU1Q99519 415 aa12.12□□□□□ -0.47
COL1A2-201ENST00000297268 NABP2Q9BQ15 211 aa12.12□□□□□ -0.47
COL1A2-201ENST00000297268 PRR32B1ATL7 298 aa12.12□□□□□ -0.47
COL1A2-201ENST00000297268 DGAT2L7PQ6IED9 249 aa12.12□□□□□ -0.47
COL1A2-201ENST00000297268 SMRP1Q8NCR6 262 aa12.12□□□□□ -0.47
COL1A2-201ENST00000297268 SGK494Q96LW2 274 aa12.12□□□□□ -0.47
COL1A2-201ENST00000297268 WNT10AQ9GZT5 417 aa12.12□□□□□ -0.47
COL1A2-201ENST00000297268 TNFRSF19Q9NS68 423 aa12.12□□□□□ -0.47
COL1A2-201ENST00000297268 NRXN2Q9P2S2 1712 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms