RNA–Protein interactions for RNA: ENST00000295550.8

COL6A3-201, Transcript of collagen type VI alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A3, Length 10,749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-201ENST00000295550 METTL26Q96S19 204 aa8.56□□□□□ -1.04
COL6A3-201ENST00000295550 TMEM70Q9BUB7 260 aa8.56□□□□□ -1.04
COL6A3-201ENST00000295550 PLXNB3Q9ULL4 1909 aa8.56□□□□□ -1.04
COL6A3-201ENST00000295550 KLF4O43474 513 aa8.56□□□□□ -1.04
COL6A3-201ENST00000295550 CA1P00915 261 aaPredicted RBP8.56□□□□□ -1.04
COL6A3-201ENST00000295550 NIT1Q86X76 327 aa8.56□□□□□ -1.04
COL6A3-201ENST00000295550 OR4D5Q8NGN0 318 aa8.56□□□□□ -1.04
COL6A3-201ENST00000295550 ABHD14BQ96IU4 210 aa8.56□□□□□ -1.04
COL6A3-201ENST00000295550 ZNF665Q9H7R5 613 aa8.56□□□□□ -1.04
COL6A3-201ENST00000295550 CCL28Q9NRJ3 127 aa8.56□□□□□ -1.04
COL6A3-201ENST00000295550 TNFRSF19Q9NS68 423 aa8.56□□□□□ -1.04
COL6A3-201ENST00000295550 GRIFINA4D1Z8 144 aa8.56□□□□□ -1.04
COL6A3-201ENST00000295550 TNFSF15O95150 251 aa8.56□□□□□ -1.04
COL6A3-201ENST00000295550 ROM1Q03395 351 aa8.56□□□□□ -1.04
COL6A3-201ENST00000295550 UBALD2Q8IYN6 164 aa8.56□□□□□ -1.04
COL6A3-201ENST00000295550 ST6GALNAC3Q8NDV1 305 aa8.56□□□□□ -1.04
COL6A3-201ENST00000295550 FAM216AQ8WUB2 273 aa8.56□□□□□ -1.04
COL6A3-201ENST00000295550 SONP18583 2426 aaKnown RBP8.56□□□□□ -1.04
COL6A3-201ENST00000295550 AGRNO00468 2067 aa8.56□□□□□ -1.04
COL6A3-201ENST00000295550 C1QTNF9BB2RNN3 333 aa8.56□□□□□ -1.04
COL6A3-201ENST00000295550 HSPB1P04792 205 aaKnown RBP8.56□□□□□ -1.04
COL6A3-201ENST00000295550 GNRHR2Q96P88 292 aa8.56□□□□□ -1.04
COL6A3-201ENST00000295550 DERL1Q9BUN8 251 aa8.56□□□□□ -1.04
COL6A3-201ENST00000295550 YBX2Q9Y2T7 364 aaKnown RBP8.56□□□□□ -1.04
COL6A3-201ENST00000295550 TRBV5-7A0A0A0MS05 114 aa8.56□□□□□ -1.04
COL6A3-201ENST00000295550 RPP25Q9BUL9 199 aaKnown RBP8.56□□□□□ -1.04
COL6A3-201ENST00000295550 PXMP4Q9Y6I8 212 aa8.56□□□□□ -1.04
COL6A3-201ENST00000295550 MKRN2OSH3BPM6 223 aa8.55□□□□□ -1.04
COL6A3-201ENST00000295550 RARRES2Q99969 163 aa8.55□□□□□ -1.04
COL6A3-201ENST00000295550 GFRA1P56159 465 aa8.55□□□□□ -1.04
COL6A3-201ENST00000295550 RUNX1Q01196 453 aa8.55□□□□□ -1.04
COL6A3-201ENST00000295550 OR10J6PQ8NGY7 276 aa8.55□□□□□ -1.04
COL6A3-201ENST00000295550 SYNGR1O43759 233 aa8.55□□□□□ -1.04
COL6A3-201ENST00000295550 C1QL3Q5VWW1 255 aa8.55□□□□□ -1.04
COL6A3-201ENST00000295550 QTRT1Q9BXR0 403 aaKnown RBP8.55□□□□□ -1.04
COL6A3-201ENST00000295550 KLK15Q9H2R5 256 aa8.55□□□□□ -1.04
COL6A3-201ENST00000295550 TCFL5Q9UL49 500 aa8.55□□□□□ -1.04
COL6A3-201ENST00000295550 NPIPB6E9PJ23 425 aa8.55□□□□□ -1.04
COL6A3-201ENST00000295550 TANC1Q9C0D5 1861 aa8.55□□□□□ -1.04
COL6A3-201ENST00000295550 IGHV3-21A0A0B4J1V1 117 aa8.55□□□□□ -1.04
COL6A3-201ENST00000295550 IGHV1OR15-9A0A0B4J2B8 117 aa8.55□□□□□ -1.04
COL6A3-201ENST00000295550 NMBP08949 121 aa8.55□□□□□ -1.04
COL6A3-201ENST00000295550 SCARF2Q96GP6 870 aaPredicted RBP8.55□□□□□ -1.04
COL6A3-201ENST00000295550 SF3B5Q9BWJ5 86 aaKnown RBP8.55□□□□□ -1.04
COL6A3-201ENST00000295550 GEMIN7Q9H840 131 aaKnown RBP8.55□□□□□ -1.04
COL6A3-201ENST00000295550 NDUFS8O00217 210 aa8.55□□□□□ -1.04
COL6A3-201ENST00000295550 KCNMB1Q16558 191 aa8.55□□□□□ -1.04
COL6A3-201ENST00000295550 PQLC2Q6ZP29 291 aa8.55□□□□□ -1.04
COL6A3-201ENST00000295550 PGPEP1Q9NXJ5 209 aa8.55□□□□□ -1.04
COL6A3-201ENST00000295550 A0A1W2PPC1 479 aa8.55□□□□□ -1.04
COL6A3-201ENST00000295550 VSIG8P0DPA2 414 aa8.55□□□□□ -1.04
COL6A3-201ENST00000295550 ANAPC13Q9BS18 74 aa8.55□□□□□ -1.04
COL6A3-201ENST00000295550 VCX2Q9H322 139 aa8.55□□□□□ -1.04
COL6A3-201ENST00000295550 C1RLQ9NZP8 487 aa8.55□□□□□ -1.04
COL6A3-201ENST00000295550 WIPI1Q5MNZ9 446 aaPredicted RBP8.55□□□□□ -1.04
COL6A3-201ENST00000295550 TMEM78Q5T7P6 136 aa8.55□□□□□ -1.04
COL6A3-201ENST00000295550 NFAM1Q8NET5 270 aaPredicted RBP8.55□□□□□ -1.04
COL6A3-201ENST00000295550 A0A1B0GWB2 263 aa8.55□□□□□ -1.04
COL6A3-201ENST00000295550 TEX30Q5JUR7 227 aa8.55□□□□□ -1.04
COL6A3-201ENST00000295550 PUSL1Q8N0Z8 303 aaKnown RBP8.55□□□□□ -1.04
COL6A3-201ENST00000295550 JKAMPQ9P055 326 aa8.55□□□□□ -1.04
COL6A3-201ENST00000295550 CLDN16Q9Y5I7 305 aa8.55□□□□□ -1.04
COL6A3-201ENST00000295550 MPC1Q9Y5U8 109 aa8.55□□□□□ -1.04
COL6A3-201ENST00000295550 A0A1W2PQF6 199 aa8.54□□□□□ -1.04
COL6A3-201ENST00000295550 FCARP24071 287 aa8.54□□□□□ -1.04
COL6A3-201ENST00000295550 TMEM95Q3KNT9 176 aa8.54□□□□□ -1.04
COL6A3-201ENST00000295550 C10orf128Q5T292 105 aa8.54□□□□□ -1.04
COL6A3-201ENST00000295550 BHLHA15Q7RTS1 189 aaPredicted RBP8.54□□□□□ -1.04
COL6A3-201ENST00000295550 GSN-AS1Q9NRJ2 163 aa8.54□□□□□ -1.04
COL6A3-201ENST00000295550 FOXS1O43638 330 aa8.54□□□□□ -1.04
COL6A3-201ENST00000295550 SRSF5Q13243 272 aaKnown RBP8.54□□□□□ -1.04
COL6A3-201ENST00000295550 LRRC75BQ2VPJ9 315 aa8.54□□□□□ -1.04
COL6A3-201ENST00000295550 ZNF784Q8NCA9 323 aaPredicted RBP8.54□□□□□ -1.04
COL6A3-201ENST00000295550 AQP3Q92482 292 aa8.54□□□□□ -1.04
COL6A3-201ENST00000295550 SFRP2Q96HF1 295 aa8.54□□□□□ -1.04
COL6A3-201ENST00000295550 PLXNA4Q9HCM2 1894 aa8.54□□□□□ -1.04
COL6A3-201ENST00000295550 ZNF205O95201 554 aa8.54□□□□□ -1.04
COL6A3-201ENST00000295550 LIPFP07098 398 aa8.54□□□□□ -1.04
COL6A3-201ENST00000295550 GLIPR1P48060 266 aa8.54□□□□□ -1.04
COL6A3-201ENST00000295550 NUBP1P53384 320 aa8.54□□□□□ -1.04
COL6A3-201ENST00000295550 OR8B2Q96RD0 313 aa8.54□□□□□ -1.04
COL6A3-201ENST00000295550 MRPS18BQ9Y676 258 aaKnown RBP8.54□□□□□ -1.04
COL6A3-201ENST00000295550 ISG15P05161 165 aa8.54□□□□□ -1.04
COL6A3-201ENST00000295550 VAX1Q5SQQ9 334 aa8.54□□□□□ -1.04
COL6A3-201ENST00000295550 TXNDC17Q9BRA2 123 aa8.54□□□□□ -1.04
COL6A3-201ENST00000295550 SPINK2P20155 84 aa8.54□□□□□ -1.04
COL6A3-201ENST00000295550 TMEM108Q6UXF1 575 aa8.54□□□□□ -1.04
COL6A3-201ENST00000295550 CISD1Q9NZ45 108 aaKnown RBP8.54□□□□□ -1.04
COL6A3-201ENST00000295550 IGHV3OR15-7A0A075B7D8 119 aa8.54□□□□□ -1.04
COL6A3-201ENST00000295550 FADS6Q8N9I5 356 aa8.54□□□□□ -1.04
COL6A3-201ENST00000295550 C16orf92Q96LL3 132 aa8.54□□□□□ -1.04
COL6A3-201ENST00000295550 H0Y980 276 aa8.54□□□□□ -1.04
COL6A3-201ENST00000295550 DXOO77932 396 aaKnown RBP8.54□□□□□ -1.04
COL6A3-201ENST00000295550 RECKO95980 971 aa8.54□□□□□ -1.04
COL6A3-201ENST00000295550 PRSS12P56730 875 aa8.54□□□□□ -1.04
COL6A3-201ENST00000295550 FXYD3Q14802 87 aa8.54□□□□□ -1.04
COL6A3-201ENST00000295550 MBNL2Q5VZF2 373 aaKnown RBP8.54□□□□□ -1.04
COL6A3-201ENST00000295550 HOGA1Q86XE5 327 aa8.54□□□□□ -1.04
COL6A3-201ENST00000295550 OPN3Q9H1Y3 402 aaPredicted RBP8.54□□□□□ -1.04
COL6A3-201ENST00000295550 PLA2G3Q9NZ20 509 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms