RNA–Protein interactions for RNA: ENST00000295008.8

MRPL55-201, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 632 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-201ENST00000295008 OR5AC1P0C628 307 aa12.73□□□□□ -0.37
MRPL55-201ENST00000295008 FAM106CPP0CH98 169 aa12.73□□□□□ -0.37
MRPL55-201ENST00000295008 VSIG10L2P0DP72 767 aa12.73□□□□□ -0.37
MRPL55-201ENST00000295008 TMEM11P17152 192 aa12.73□□□□□ -0.37
MRPL55-201ENST00000295008 VAMP1P23763 118 aa12.73□□□□□ -0.37
MRPL55-201ENST00000295008 RAB25P57735 213 aa12.73□□□□□ -0.37
MRPL55-201ENST00000295008 UBE2MP61081 183 aaKnown RBP12.73□□□□□ -0.37
MRPL55-201ENST00000295008 PPP1R1AQ13522 171 aa12.73□□□□□ -0.37
MRPL55-201ENST00000295008 EBI3Q14213 229 aa12.73□□□□□ -0.37
MRPL55-201ENST00000295008 HNF4GQ14541 408 aa12.73□□□□□ -0.37
MRPL55-201ENST00000295008 LY6EQ16553 131 aa12.73□□□□□ -0.37
MRPL55-201ENST00000295008 SP6Q3SY56 376 aa12.73□□□□□ -0.37
MRPL55-201ENST00000295008 TMEM128Q5BJH2 165 aa12.73□□□□□ -0.37
MRPL55-201ENST00000295008 DHRS7BQ6IAN0 325 aaPredicted RBP12.73□□□□□ -0.37
MRPL55-201ENST00000295008 OR2T10Q8NGZ9 312 aa12.73□□□□□ -0.37
MRPL55-201ENST00000295008 OR5R1Q8NH85 324 aa12.73□□□□□ -0.37
MRPL55-201ENST00000295008 TNFRSF19Q9NS68 423 aa12.73□□□□□ -0.37
MRPL55-201ENST00000295008 SVEP1Q4LDE5 3571 aa12.73□□□□□ -0.37
MRPL55-201ENST00000295008 TLN2Q9Y4G6 2542 aa12.72□□□□□ -0.37
MRPL55-201ENST00000295008 HIVEP2P31629 2446 aa12.72□□□□□ -0.37
MRPL55-201ENST00000295008 ANK3Q12955 4377 aaKnown RBP12.72□□□□□ -0.37
MRPL55-201ENST00000295008 A6NDX4 124 aa12.72□□□□□ -0.37
MRPL55-201ENST00000295008 DNAJC9-AS1A6NH13 148 aa12.72□□□□□ -0.37
MRPL55-201ENST00000295008 RBFOX2O43251 390 aaKnown RBP eCLIP12.72□□□□□ -0.37
MRPL55-201ENST00000295008 PEX14O75381 377 aa12.72□□□□□ -0.37
MRPL55-201ENST00000295008 S1PR2O95136 353 aa12.72□□□□□ -0.37
MRPL55-201ENST00000295008 MECP2P51608 486 aaKnown RBP12.72□□□□□ -0.37
MRPL55-201ENST00000295008 DHODHQ02127 395 aa12.72□□□□□ -0.37
MRPL55-201ENST00000295008 SLC9A3R2Q15599 337 aa12.72□□□□□ -0.37
MRPL55-201ENST00000295008 ZNF585BQ52M93 769 aa12.72□□□□□ -0.37
MRPL55-201ENST00000295008 TMEM177Q53S58 311 aa12.72□□□□□ -0.37
MRPL55-201ENST00000295008 CCBE1Q6UXH8 406 aaPredicted RBP12.72□□□□□ -0.37
MRPL55-201ENST00000295008 TMEM219Q86XT9 240 aa12.72□□□□□ -0.37
MRPL55-201ENST00000295008 Q8N6K4 173 aa12.72□□□□□ -0.37
MRPL55-201ENST00000295008 TCTEX1D1Q8N7M0 179 aa12.72□□□□□ -0.37
MRPL55-201ENST00000295008 CD300LFQ8TDQ1 290 aa12.72□□□□□ -0.37
MRPL55-201ENST00000295008 ZNF418Q8TF45 676 aaPredicted RBP12.72□□□□□ -0.37
MRPL55-201ENST00000295008 FLYWCH2Q96CP2 140 aaKnown RBP12.72□□□□□ -0.37
MRPL55-201ENST00000295008 RITA1Q96K30 269 aa12.72□□□□□ -0.37
MRPL55-201ENST00000295008 ESM1Q9NQ30 184 aa12.72□□□□□ -0.37
MRPL55-201ENST00000295008 INMT-MINDY4F8WBC2 141 aa12.71□□□□□ -0.37
MRPL55-201ENST00000295008 B3GALNT1O75752 331 aa12.71□□□□□ -0.37
MRPL55-201ENST00000295008 SFT2D2O95562 160 aa12.71□□□□□ -0.37
MRPL55-201ENST00000295008 OR4E1P0C645 316 aa12.71□□□□□ -0.37
MRPL55-201ENST00000295008 UCP1P25874 307 aa12.71□□□□□ -0.37
MRPL55-201ENST00000295008 CNTFRP26992 372 aa12.71□□□□□ -0.37
MRPL55-201ENST00000295008 LPAR6P43657 344 aa12.71□□□□□ -0.37
MRPL55-201ENST00000295008 RPS16P62249 146 aaKnown RBP12.71□□□□□ -0.37
MRPL55-201ENST00000295008 C4orf46Q504U0 113 aa12.71□□□□□ -0.37
MRPL55-201ENST00000295008 C11orf88Q6PI97 169 aa12.71□□□□□ -0.37
MRPL55-201ENST00000295008 OR4C13Q8NGP0 309 aa12.71□□□□□ -0.37
MRPL55-201ENST00000295008 GALNT14Q96FL9 552 aa12.71□□□□□ -0.37
MRPL55-201ENST00000295008 HARBI1Q96MB7 349 aa12.71□□□□□ -0.37
MRPL55-201ENST00000295008 DUX5Q96PT3 197 aa12.71□□□□□ -0.37
MRPL55-201ENST00000295008 MARVELD1Q9BSK0 173 aa12.71□□□□□ -0.37
MRPL55-201ENST00000295008 FAM212BQ9NTI7 297 aaPredicted RBP12.71□□□□□ -0.37
MRPL55-201ENST00000295008 PRR13Q9NZ81 148 aa12.71□□□□□ -0.37
MRPL55-201ENST00000295008 VPREB3Q9UKI3 123 aa12.71□□□□□ -0.37
MRPL55-201ENST00000295008 KCNIP3Q9Y2W7 256 aa12.71□□□□□ -0.37
MRPL55-201ENST00000295008 POMT1Q9Y6A1 747 aa12.71□□□□□ -0.37
MRPL55-201ENST00000295008 C9orf170A2RU37 121 aa12.7□□□□□ -0.38
MRPL55-201ENST00000295008 SHOXO15266 292 aa12.7□□□□□ -0.38
MRPL55-201ENST00000295008 CHST1O43916 411 aa12.7□□□□□ -0.38
MRPL55-201ENST00000295008 HPRT1P00492 218 aa12.7□□□□□ -0.38
MRPL55-201ENST00000295008 IFNA2P01563 188 aa12.7□□□□□ -0.38
MRPL55-201ENST00000295008 HLA-AP01891 365 aaKnown RBP12.7□□□□□ -0.38
MRPL55-201ENST00000295008 SERPINE2P07093 398 aa12.7□□□□□ -0.38
MRPL55-201ENST00000295008 HILS1P60008 231 aa12.7□□□□□ -0.38
MRPL55-201ENST00000295008 DHRS2Q13268 280 aa12.7□□□□□ -0.38
MRPL55-201ENST00000295008 TMEM187Q14656 261 aa12.7□□□□□ -0.38
MRPL55-201ENST00000295008 OXA1LQ15070 435 aa12.7□□□□□ -0.38
MRPL55-201ENST00000295008 MMDQ15546 238 aa12.7□□□□□ -0.38
MRPL55-201ENST00000295008 TRIM16LQ309B1 348 aa12.7□□□□□ -0.38
MRPL55-201ENST00000295008 LYG2Q86SG7 212 aa12.7□□□□□ -0.38
MRPL55-201ENST00000295008 TMEM86BQ8N661 226 aa12.7□□□□□ -0.38
MRPL55-201ENST00000295008 OR52B4Q8NGK2 314 aa12.7□□□□□ -0.38
MRPL55-201ENST00000295008 OSR1Q8TAX0 266 aaPredicted RBP12.7□□□□□ -0.38
MRPL55-201ENST00000295008 CASTOR1Q8WTX7 329 aa12.7□□□□□ -0.38
MRPL55-201ENST00000295008 GLYATL2Q8WU03 294 aa12.7□□□□□ -0.38
MRPL55-201ENST00000295008 SEC22CQ9BRL7 303 aa12.7□□□□□ -0.38
MRPL55-201ENST00000295008 SLC25A33Q9BSK2 321 aa12.7□□□□□ -0.38
MRPL55-201ENST00000295008 TMEM222Q9H0R3 208 aa12.7□□□□□ -0.38
MRPL55-201ENST00000295008 ALX4Q9H161 411 aaPredicted RBP12.7□□□□□ -0.38
MRPL55-201ENST00000295008 PLEKHA2Q9HB19 425 aa12.7□□□□□ -0.38
MRPL55-201ENST00000295008 COMMD9Q9P000 198 aa12.7□□□□□ -0.38
MRPL55-201ENST00000295008 PITPNC1Q9UKF7 332 aa12.7□□□□□ -0.38
MRPL55-201ENST00000295008 SRRM4A7MD48 611 aaKnown RBP12.69□□□□□ -0.38
MRPL55-201ENST00000295008 OR2F2O95006 317 aa12.69□□□□□ -0.38
MRPL55-201ENST00000295008 IGKV1-39P01597 117 aa12.69□□□□□ -0.38
MRPL55-201ENST00000295008 IGKV1D-39P04432 117 aa12.69□□□□□ -0.38
MRPL55-201ENST00000295008 ANXA3P12429 323 aa12.69□□□□□ -0.38
MRPL55-201ENST00000295008 F2RL1P55085 397 aa12.69□□□□□ -0.38
MRPL55-201ENST00000295008 RAG2P55895 527 aa12.69□□□□□ -0.38
MRPL55-201ENST00000295008 LHFPL5Q8TAF8 219 aa12.69□□□□□ -0.38
MRPL55-201ENST00000295008 CHPT1Q8WUD6 406 aa12.69□□□□□ -0.38
MRPL55-201ENST00000295008 RBM14Q96PK6 669 aaKnown RBP12.69□□□□□ -0.38
MRPL55-201ENST00000295008 RNF5Q99942 180 aa12.69□□□□□ -0.38
MRPL55-201ENST00000295008 CHIAQ9BZP6 476 aa12.69□□□□□ -0.38
MRPL55-201ENST00000295008 SONP18583 2426 aaKnown RBP12.69□□□□□ -0.38
MRPL55-201ENST00000295008 NSD1Q96L73 2696 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms