RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 ZNF716A6NP11 495 aa8.64□□□□□ -1.03
LMX1A-201ENST00000294816 RNF212BA8MTL3 300 aa8.64□□□□□ -1.03
LMX1A-201ENST00000294816 YPEL1O60688 119 aa8.64□□□□□ -1.03
LMX1A-201ENST00000294816 MRPL33O75394 65 aaKnown RBP8.64□□□□□ -1.03
LMX1A-201ENST00000294816 CD99P14209 185 aa8.64□□□□□ -1.03
LMX1A-201ENST00000294816 COTL1Q14019 142 aa8.64□□□□□ -1.03
LMX1A-201ENST00000294816 VASH2Q86V25 355 aa8.64□□□□□ -1.03
LMX1A-201ENST00000294816 RPS19BP1Q86WX3 136 aaKnown RBP8.64□□□□□ -1.03
LMX1A-201ENST00000294816 OR8I2Q8N0Y5 310 aa8.64□□□□□ -1.03
LMX1A-201ENST00000294816 OR4B1Q8NGF8 309 aa8.64□□□□□ -1.03
LMX1A-201ENST00000294816 CCDC74BQ96LY2 380 aa8.64□□□□□ -1.03
LMX1A-201ENST00000294816 YPEL2Q96QA6 119 aa8.64□□□□□ -1.03
LMX1A-201ENST00000294816 QTRT1Q9BXR0 403 aaKnown RBP8.64□□□□□ -1.03
LMX1A-201ENST00000294816 STRADBQ9C0K7 418 aa8.64□□□□□ -1.03
LMX1A-201ENST00000294816 KCNIP2Q9NS61 270 aa8.64□□□□□ -1.03
LMX1A-201ENST00000294816 LNP1A1A4G5 178 aa8.63□□□□□ -1.03
LMX1A-201ENST00000294816 TIMP3P35625 211 aa8.63□□□□□ -1.03
LMX1A-201ENST00000294816 FOXG1P55316 489 aaPredicted RBP8.63□□□□□ -1.03
LMX1A-201ENST00000294816 LINC00205P59089 165 aa8.63□□□□□ -1.03
LMX1A-201ENST00000294816 WDR74Q6RFH5 385 aaPredicted RBP8.63□□□□□ -1.03
LMX1A-201ENST00000294816 APH1AQ96BI3 265 aa8.63□□□□□ -1.03
LMX1A-201ENST00000294816 PRDM14Q9GZV8 571 aa8.63□□□□□ -1.03
LMX1A-201ENST00000294816 PROK2Q9HC23 129 aa8.63□□□□□ -1.03
LMX1A-201ENST00000294816 DEPPQ9NTK1 212 aa8.63□□□□□ -1.03
LMX1A-201ENST00000294816 HSPB7Q9UBY9 170 aa8.63□□□□□ -1.03
LMX1A-201ENST00000294816 A8MXE2 369 aa8.63□□□□□ -1.03
LMX1A-201ENST00000294816 FAM90A26D6RGX4 464 aa8.63□□□□□ -1.03
LMX1A-201ENST00000294816 DKK1O94907 266 aa8.63□□□□□ -1.03
LMX1A-201ENST00000294816 RPL30P62888 115 aaKnown RBP8.63□□□□□ -1.03
LMX1A-201ENST00000294816 PCOLCEQ15113 449 aa8.63□□□□□ -1.03
LMX1A-201ENST00000294816 GUSBP11Q6P575 273 aa8.63□□□□□ -1.03
LMX1A-201ENST00000294816 ERASQ7Z444 233 aa8.63□□□□□ -1.03
LMX1A-201ENST00000294816 SAXO1Q8IYX7 474 aa8.63□□□□□ -1.03
LMX1A-201ENST00000294816 Q8NFD4 153 aa8.63□□□□□ -1.03
LMX1A-201ENST00000294816 SSMEM1Q8WWF3 244 aa8.63□□□□□ -1.03
LMX1A-201ENST00000294816 SPSB4Q96A44 273 aa8.63□□□□□ -1.03
LMX1A-201ENST00000294816 LRFN3Q9BTN0 628 aa8.63□□□□□ -1.03
LMX1A-201ENST00000294816 PRRG4Q9BZD6 226 aa8.63□□□□□ -1.03
LMX1A-201ENST00000294816 C10orf142B7Z368 130 aa8.62□□□□□ -1.03
LMX1A-201ENST00000294816 P04436 131 aa8.62□□□□□ -1.03
LMX1A-201ENST00000294816 RFPL3SP0C7P2 107 aa8.62□□□□□ -1.03
LMX1A-201ENST00000294816 EN2P19622 333 aaPredicted RBP8.62□□□□□ -1.03
LMX1A-201ENST00000294816 COL8A2P25067 703 aa8.62□□□□□ -1.03
LMX1A-201ENST00000294816 CEBPDP49716 269 aaPredicted RBP8.62□□□□□ -1.03
LMX1A-201ENST00000294816 YPEL3P61236 119 aaPredicted RBP8.62□□□□□ -1.03
LMX1A-201ENST00000294816 LTC4SQ16873 150 aa8.62□□□□□ -1.03
LMX1A-201ENST00000294816 UNQ5815/PRO19632Q6UWF5 114 aa8.62□□□□□ -1.03
LMX1A-201ENST00000294816 MRPL52Q86TS9 123 aaKnown RBP8.62□□□□□ -1.03
LMX1A-201ENST00000294816 PLPPR2Q96GM1 343 aa8.62□□□□□ -1.03
LMX1A-201ENST00000294816 FAM234AQ9H0X4 552 aa8.62□□□□□ -1.03
LMX1A-201ENST00000294816 GNB4Q9HAV0 340 aa8.62□□□□□ -1.03
LMX1A-201ENST00000294816 NRN1Q9NPD7 142 aa8.62□□□□□ -1.03
LMX1A-201ENST00000294816 C17orf98A8MV24 154 aa8.62□□□□□ -1.03
LMX1A-201ENST00000294816 C2CD4DB7Z1M9 353 aa8.62□□□□□ -1.03
LMX1A-201ENST00000294816 TMPRSS2O15393 492 aa8.62□□□□□ -1.03
LMX1A-201ENST00000294816 CCL7P80098 99 aa8.62□□□□□ -1.03
LMX1A-201ENST00000294816 MIC13Q5XKP0 118 aa8.62□□□□□ -1.03
LMX1A-201ENST00000294816 LEMD1Q68G75 181 aa8.62□□□□□ -1.03
LMX1A-201ENST00000294816 SYT13Q7L8C5 426 aa8.62□□□□□ -1.03
LMX1A-201ENST00000294816 FAM19A2Q8N3H0 131 aa8.62□□□□□ -1.03
LMX1A-201ENST00000294816 IFI44Q8TCB0 444 aa8.62□□□□□ -1.03
LMX1A-201ENST00000294816 UHRF2Q96PU4 802 aa8.62□□□□□ -1.03
LMX1A-201ENST00000294816 UQCR10Q9UDW1 63 aa8.62□□□□□ -1.03
LMX1A-201ENST00000294816 LAMTOR2Q9Y2Q5 125 aa8.62□□□□□ -1.03
LMX1A-201ENST00000294816 ZNF253O75346 499 aa8.62□□□□□ -1.03
LMX1A-201ENST00000294816 TDGF1P13385 188 aa8.62□□□□□ -1.03
LMX1A-201ENST00000294816 CD1BP29016 333 aa8.62□□□□□ -1.03
LMX1A-201ENST00000294816 GNG3P63215 75 aa8.62□□□□□ -1.03
LMX1A-201ENST00000294816 OR52L2PQ8NGH6 319 aa8.62□□□□□ -1.03
LMX1A-201ENST00000294816 C22orf15Q8WYQ4 148 aa8.62□□□□□ -1.03
LMX1A-201ENST00000294816 RNF2Q99496 336 aa8.62□□□□□ -1.03
LMX1A-201ENST00000294816 UBE2ZQ9H832 354 aaPredicted RBP8.62□□□□□ -1.03
LMX1A-201ENST00000294816 OCIAD1Q9NX40 245 aa8.62□□□□□ -1.03
LMX1A-201ENST00000294816 IL36BQ9NZH7 164 aa8.62□□□□□ -1.03
LMX1A-201ENST00000294816 KCNIP1Q9NZI2 227 aa8.62□□□□□ -1.03
LMX1A-201ENST00000294816 IGHV3-43A0A0B4J1X8 118 aa8.61□□□□□ -1.03
LMX1A-201ENST00000294816 CCL25O15444 150 aa8.61□□□□□ -1.03
LMX1A-201ENST00000294816 NXPH2O95156 264 aa8.61□□□□□ -1.03
LMX1A-201ENST00000294816 OR2H2O95918 312 aa8.61□□□□□ -1.03
LMX1A-201ENST00000294816 IGHV3-43DP0DP04 118 aa8.61□□□□□ -1.03
LMX1A-201ENST00000294816 GDF1P27539 372 aa8.61□□□□□ -1.03
LMX1A-201ENST00000294816 RPL31P62899 125 aaKnown RBP8.61□□□□□ -1.03
LMX1A-201ENST00000294816 CATR1Q13166 79 aa8.61□□□□□ -1.03
LMX1A-201ENST00000294816 RPEL1Q2QD12 228 aa8.61□□□□□ -1.03
LMX1A-201ENST00000294816 KRTAP27-1Q3LI81 207 aa8.61□□□□□ -1.03
LMX1A-201ENST00000294816 TRIM61Q5EBN2 209 aa8.61□□□□□ -1.03
LMX1A-201ENST00000294816 FBXW9Q5XUX1 488 aa8.61□□□□□ -1.03
LMX1A-201ENST00000294816 ARL6IP6Q8N6S5 226 aa8.61□□□□□ -1.03
LMX1A-201ENST00000294816 NINJ1Q92982 152 aa8.61□□□□□ -1.03
LMX1A-201ENST00000294816 PCED1AQ9H1Q7 454 aa8.61□□□□□ -1.03
LMX1A-201ENST00000294816 DEFB108AA8MXU0 73 aa8.61□□□□□ -1.03
LMX1A-201ENST00000294816 SELENOTP62341 195 aa8.61□□□□□ -1.03
LMX1A-201ENST00000294816 PLP2Q04941 152 aa8.61□□□□□ -1.03
LMX1A-201ENST00000294816 FXYD3Q14802 87 aa8.61□□□□□ -1.03
LMX1A-201ENST00000294816 MRPL54Q6P161 138 aaKnown RBP8.61□□□□□ -1.03
LMX1A-201ENST00000294816 MMD2Q8IY49 270 aa8.61□□□□□ -1.03
LMX1A-201ENST00000294816 C1orf174Q8IYL3 243 aa8.61□□□□□ -1.03
LMX1A-201ENST00000294816 SERTAD4Q9NUC0 356 aa8.61□□□□□ -1.03
LMX1A-201ENST00000294816 GPX1P07203 203 aa8.61□□□□□ -1.03
LMX1A-201ENST00000294816 OTX2P32243 289 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms