RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 METTL15P1P0C7V9 234 aa7.54□□□□□ -1.2
PDPN-201ENST00000294489 NFYBP25208 207 aa7.54□□□□□ -1.2
PDPN-201ENST00000294489 MUC15Q8N387 334 aa7.54□□□□□ -1.2
PDPN-201ENST00000294489 R3HDM4Q96D70 268 aa7.54□□□□□ -1.2
PDPN-201ENST00000294489 RBKSQ9H477 322 aa7.54□□□□□ -1.2
PDPN-201ENST00000294489 LINC00312Q9Y6C7 94 aa7.54□□□□□ -1.2
PDPN-201ENST00000294489 PROP1O75360 226 aa7.54□□□□□ -1.2
PDPN-201ENST00000294489 LINC00205P59089 165 aa7.54□□□□□ -1.2
PDPN-201ENST00000294489 ERVK-16P61578 105 aa7.54□□□□□ -1.2
PDPN-201ENST00000294489 MEF2CQ06413 473 aaPredicted RBP7.54□□□□□ -1.2
PDPN-201ENST00000294489 RPL39P5Q59GN2 51 aa7.54□□□□□ -1.2
PDPN-201ENST00000294489 LURAP1LQ8IV03 231 aa7.54□□□□□ -1.2
PDPN-201ENST00000294489 FAM213BQ8TBF2 198 aa7.54□□□□□ -1.2
PDPN-201ENST00000294489 SCGB1C1Q8TD33 95 aa7.54□□□□□ -1.2
PDPN-201ENST00000294489 CIB3Q96Q77 187 aaPredicted RBP7.54□□□□□ -1.2
PDPN-201ENST00000294489 TSNAXQ99598 290 aaKnown RBP7.54□□□□□ -1.2
PDPN-201ENST00000294489 GAL3ST2Q9H3Q3 398 aa7.54□□□□□ -1.2
PDPN-201ENST00000294489 UQCC1Q9NVA1 299 aa7.54□□□□□ -1.2
PDPN-201ENST00000294489 PKD1L2Q7Z442 2459 aa7.53□□□□□ -1.2
PDPN-201ENST00000294489 F8W036 122 aa7.53□□□□□ -1.2
PDPN-201ENST00000294489 SRSF3P84103 164 aaKnown RBP7.53□□□□□ -1.2
PDPN-201ENST00000294489 CT45A1Q5HYN5 189 aa7.53□□□□□ -1.2
PDPN-201ENST00000294489 DTX2Q86UW9 622 aa7.53□□□□□ -1.2
PDPN-201ENST00000294489 OR10A7Q8NGE5 316 aa7.53□□□□□ -1.2
PDPN-201ENST00000294489 CT45A3Q8NHU0 189 aa7.53□□□□□ -1.2
PDPN-201ENST00000294489 LEAP2Q969E1 77 aa7.53□□□□□ -1.2
PDPN-201ENST00000294489 IGHV1-69-2A0A0G2JMI3 117 aa7.53□□□□□ -1.2
PDPN-201ENST00000294489 TMEM238LA0A1B0GVL6 79 aa7.53□□□□□ -1.2
PDPN-201ENST00000294489 FAM90A9PA6NNJ1 464 aa7.53□□□□□ -1.2
PDPN-201ENST00000294489 RNASEK-C17orf49H0YIS7 233 aa7.53□□□□□ -1.2
PDPN-201ENST00000294489 SLC31A2O15432 143 aa7.53□□□□□ -1.2
PDPN-201ENST00000294489 NDUFB3O43676 98 aa7.53□□□□□ -1.2
PDPN-201ENST00000294489 C1QL1O75973 258 aa7.53□□□□□ -1.2
PDPN-201ENST00000294489 FHITP49789 147 aa7.53□□□□□ -1.2
PDPN-201ENST00000294489 ARHGDIBP52566 201 aa7.53□□□□□ -1.2
PDPN-201ENST00000294489 DVL1P1P54792 670 aaPredicted RBP7.53□□□□□ -1.2
PDPN-201ENST00000294489 RPL31P62899 125 aaKnown RBP7.53□□□□□ -1.2
PDPN-201ENST00000294489 MRPS11P82912 194 aaKnown RBP7.53□□□□□ -1.2
PDPN-201ENST00000294489 C21orf62-AS1Q17RA5 79 aa7.53□□□□□ -1.2
PDPN-201ENST00000294489 LRRC10Q5BKY1 277 aa7.53□□□□□ -1.2
PDPN-201ENST00000294489 AKR1C8PQ5T2L2 129 aa7.53□□□□□ -1.2
PDPN-201ENST00000294489 SVBPQ8N300 66 aa7.53□□□□□ -1.2
PDPN-201ENST00000294489 DTD1Q8TEA8 209 aa7.53□□□□□ -1.2
PDPN-201ENST00000294489 ADTRPQ96IZ2 230 aa7.53□□□□□ -1.2
PDPN-201ENST00000294489 TMEM231Q9H6L2 316 aa7.53□□□□□ -1.2
PDPN-201ENST00000294489 PCP4L1A6NKN8 68 aa7.52□□□□□ -1.21
PDPN-201ENST00000294489 NDUFA2O43678 99 aa7.52□□□□□ -1.21
PDPN-201ENST00000294489 ZG16O60844 167 aa7.52□□□□□ -1.21
PDPN-201ENST00000294489 NQO2P16083 231 aa7.52□□□□□ -1.21
PDPN-201ENST00000294489 PRAMEF5Q5TYX0 476 aa7.52□□□□□ -1.21
PDPN-201ENST00000294489 ZNF600Q6ZNG1 722 aa7.52□□□□□ -1.21
PDPN-201ENST00000294489 LYG1Q8N1E2 194 aa7.52□□□□□ -1.21
PDPN-201ENST00000294489 LFNGQ8NES3 379 aa7.52□□□□□ -1.21
PDPN-201ENST00000294489 OR4S2Q8NH73 311 aa7.52□□□□□ -1.21
PDPN-201ENST00000294489 MS4A7Q9GZW8 240 aaPredicted RBP7.52□□□□□ -1.21
PDPN-201ENST00000294489 CBLN4Q9NTU7 201 aa7.52□□□□□ -1.21
PDPN-201ENST00000294489 RPUSD1Q9UJJ7 312 aaKnown RBP7.52□□□□□ -1.21
PDPN-201ENST00000294489 FAM96BQ9Y3D0 163 aa7.52□□□□□ -1.21
PDPN-201ENST00000294489 ATRXP46100 2492 aa7.52□□□□□ -1.21
PDPN-201ENST00000294489 SAA2-SAA4A0A096LPE2 208 aa7.52□□□□□ -1.21
PDPN-201ENST00000294489 A0A1W2PPE3 182 aa7.52□□□□□ -1.21
PDPN-201ENST00000294489 CEBPZOSA8MTT3 80 aa7.52□□□□□ -1.21
PDPN-201ENST00000294489 LY86O95711 162 aa7.52□□□□□ -1.21
PDPN-201ENST00000294489 SAA2P0DJI9 122 aaPredicted RBP7.52□□□□□ -1.21
PDPN-201ENST00000294489 SNCAP37840 140 aa7.52□□□□□ -1.21
PDPN-201ENST00000294489 THBS3P49746 956 aa7.52□□□□□ -1.21
PDPN-201ENST00000294489 BTN1A1Q13410 526 aa7.52□□□□□ -1.21
PDPN-201ENST00000294489 C16orf54Q6UWD8 224 aa7.52□□□□□ -1.21
PDPN-201ENST00000294489 TMEM14EPQ6UXP3 125 aa7.52□□□□□ -1.21
PDPN-201ENST00000294489 ZNF439Q8NDP4 499 aa7.52□□□□□ -1.21
PDPN-201ENST00000294489 OR4A16Q8NH70 328 aa7.52□□□□□ -1.21
PDPN-201ENST00000294489 SEC11CQ9BY50 192 aa7.52□□□□□ -1.21
PDPN-201ENST00000294489 GOSR1O95249 250 aa7.52□□□□□ -1.21
PDPN-201ENST00000294489 CD5P06127 495 aa7.52□□□□□ -1.21
PDPN-201ENST00000294489 GNG10P50151 68 aa7.52□□□□□ -1.21
PDPN-201ENST00000294489 RUNX1Q01196 453 aa7.52□□□□□ -1.21
PDPN-201ENST00000294489 HFEQ30201 348 aa7.52□□□□□ -1.21
PDPN-201ENST00000294489 THNSL2Q86YJ6 484 aa7.52□□□□□ -1.21
PDPN-201ENST00000294489 ZNF525Q8N782 197 aa7.52□□□□□ -1.21
PDPN-201ENST00000294489 RAB39BQ96DA2 213 aa7.52□□□□□ -1.21
PDPN-201ENST00000294489 PBDC1Q9BVG4 233 aa7.52□□□□□ -1.21
PDPN-201ENST00000294489 ADGRG4Q8IZF6 3080 aa7.51□□□□□ -1.21
PDPN-201ENST00000294489 IFNA17P01571 189 aa7.51□□□□□ -1.21
PDPN-201ENST00000294489 IGHV2-70P01814 119 aa7.51□□□□□ -1.21
PDPN-201ENST00000294489 DAOP14920 347 aa7.51□□□□□ -1.21
PDPN-201ENST00000294489 SLC38A11Q08AI6 406 aa7.51□□□□□ -1.21
PDPN-201ENST00000294489 PEA15Q15121 130 aa7.51□□□□□ -1.21
PDPN-201ENST00000294489 OR8G2PQ6IF36 304 aa7.51□□□□□ -1.21
PDPN-201ENST00000294489 DPPA3Q6W0C5 159 aa7.51□□□□□ -1.21
PDPN-201ENST00000294489 SSX9Q7RTT3 188 aa7.51□□□□□ -1.21
PDPN-201ENST00000294489 H1FXQ92522 213 aaKnown RBP7.51□□□□□ -1.21
PDPN-201ENST00000294489 ZNF714Q96N38 554 aa7.51□□□□□ -1.21
PDPN-201ENST00000294489 CLCC1Q96S66 551 aa7.51□□□□□ -1.21
PDPN-201ENST00000294489 CARHSP1Q9Y2V2 147 aaKnown RBP7.51□□□□□ -1.21
PDPN-201ENST00000294489 RAB2AP61019 212 aa7.51□□□□□ -1.21
PDPN-201ENST00000294489 TLE4Q04727 773 aa7.51□□□□□ -1.21
PDPN-201ENST00000294489 ARL16Q0P5N6 197 aa7.51□□□□□ -1.21
PDPN-201ENST00000294489 ATP6V1FQ16864 119 aa7.51□□□□□ -1.21
PDPN-201ENST00000294489 C10orf91Q5T1B1 145 aa7.51□□□□□ -1.21
PDPN-201ENST00000294489 SLC25A48Q6ZT89 311 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms