RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 CGB3P0DN86 165 aa11.58□□□□□ -0.56
NXF1-201ENST00000294172 CGB7P0DN87 165 aa11.58□□□□□ -0.56
NXF1-201ENST00000294172 AKR1D1P51857 326 aa11.58□□□□□ -0.56
NXF1-201ENST00000294172 LRRC75BQ2VPJ9 315 aa11.58□□□□□ -0.56
NXF1-201ENST00000294172 Q8TCH9 128 aa11.58□□□□□ -0.56
NXF1-201ENST00000294172 C2CD4CQ8TF44 421 aa11.58□□□□□ -0.56
NXF1-201ENST00000294172 C20orf24Q9BUV8 137 aa11.58□□□□□ -0.56
NXF1-201ENST00000294172 QTRT1Q9BXR0 403 aaKnown RBP11.58□□□□□ -0.56
NXF1-201ENST00000294172 VSIRQ9H7M9 311 aa11.58□□□□□ -0.56
NXF1-201ENST00000294172 ZZEF1O43149 2961 aa11.57□□□□□ -0.56
NXF1-201ENST00000294172 COLCA2A8K830 154 aa11.57□□□□□ -0.56
NXF1-201ENST00000294172 SNRNP70P08621 437 aaKnown RBP11.57□□□□□ -0.56
NXF1-201ENST00000294172 OR9G9P0C7N8 305 aa11.57□□□□□ -0.56
NXF1-201ENST00000294172 TNFRSF1AP19438 455 aa11.57□□□□□ -0.56
NXF1-201ENST00000294172 CEBPGP53567 150 aa11.57□□□□□ -0.56
NXF1-201ENST00000294172 CT45A1Q5HYN5 189 aa11.57□□□□□ -0.56
NXF1-201ENST00000294172 LINC00518Q8N0U6 118 aa11.57□□□□□ -0.56
NXF1-201ENST00000294172 CT45A3Q8NHU0 189 aa11.57□□□□□ -0.56
NXF1-201ENST00000294172 CLCC1Q96S66 551 aa11.57□□□□□ -0.56
NXF1-201ENST00000294172 S1PR3Q99500 378 aa11.57□□□□□ -0.56
NXF1-201ENST00000294172 WDR61Q9GZS3 305 aaKnown RBP11.57□□□□□ -0.56
NXF1-201ENST00000294172 RPRMQ9NS64 109 aa11.57□□□□□ -0.56
NXF1-201ENST00000294172 BTBD17A6NE02 478 aa11.57□□□□□ -0.56
NXF1-201ENST00000294172 M0R036 132 aa11.57□□□□□ -0.56
NXF1-201ENST00000294172 GFRA3O60609 400 aa11.57□□□□□ -0.56
NXF1-201ENST00000294172 HPRT1P00492 218 aa11.57□□□□□ -0.56
NXF1-201ENST00000294172 IFNA17P01571 189 aa11.57□□□□□ -0.56
NXF1-201ENST00000294172 NDUFB7P17568 137 aa11.57□□□□□ -0.56
NXF1-201ENST00000294172 RPL35P42766 123 aaKnown RBP11.57□□□□□ -0.56
NXF1-201ENST00000294172 ELLP55199 621 aaPredicted RBP11.57□□□□□ -0.56
NXF1-201ENST00000294172 TLE1Q04724 770 aa11.57□□□□□ -0.56
NXF1-201ENST00000294172 PRAMEF5Q5TYX0 476 aa11.57□□□□□ -0.56
NXF1-201ENST00000294172 ZNF788Q6ZQV5 615 aa11.57□□□□□ -0.56
NXF1-201ENST00000294172 C1orf229Q6ZS94 237 aaPredicted RBP11.57□□□□□ -0.56
NXF1-201ENST00000294172 GFOD1Q9NXC2 390 aa11.57□□□□□ -0.56
NXF1-201ENST00000294172 RAXQ9Y2V3 346 aa11.57□□□□□ -0.56
NXF1-201ENST00000294172 GNG10P50151 68 aa11.56□□□□□ -0.56
NXF1-201ENST00000294172 TMPRSS3P57727 454 aa11.56□□□□□ -0.56
NXF1-201ENST00000294172 RAB2AP61019 212 aa11.56□□□□□ -0.56
NXF1-201ENST00000294172 AWAT1Q58HT5 328 aa11.56□□□□□ -0.56
NXF1-201ENST00000294172 DPPA3Q6W0C5 159 aa11.56□□□□□ -0.56
NXF1-201ENST00000294172 TCF23Q7RTU1 214 aa11.56□□□□□ -0.56
NXF1-201ENST00000294172 SAP30LQ9HAJ7 183 aa11.56□□□□□ -0.56
NXF1-201ENST00000294172 RAB9BQ9NP90 201 aa11.56□□□□□ -0.56
NXF1-201ENST00000294172 KIAA1456Q9P272 454 aa11.56□□□□□ -0.56
NXF1-201ENST00000294172 RAI1Q7Z5J4 1906 aaPredicted RBP11.56□□□□□ -0.56
NXF1-201ENST00000294172 ATRXP46100 2492 aa11.56□□□□□ -0.56
NXF1-201ENST00000294172 A0A1B0GW64 132 aa11.55□□□□□ -0.56
NXF1-201ENST00000294172 RAB7AP51149 207 aa11.55□□□□□ -0.56
NXF1-201ENST00000294172 LCN15Q6UWW0 184 aa11.55□□□□□ -0.56
NXF1-201ENST00000294172 LYG1Q8N1E2 194 aa11.55□□□□□ -0.56
NXF1-201ENST00000294172 OR10P1Q8NGE3 313 aa11.55□□□□□ -0.56
NXF1-201ENST00000294172 CCL17Q92583 94 aa11.55□□□□□ -0.56
NXF1-201ENST00000294172 TAF15Q92804 592 aaKnown RBP eCLIP11.55□□□□□ -0.56
NXF1-201ENST00000294172 RBMXL1Q96E39 390 aaKnown RBP11.55□□□□□ -0.56
NXF1-201ENST00000294172 CIB3Q96Q77 187 aaPredicted RBP11.55□□□□□ -0.56
NXF1-201ENST00000294172 NCOR1P1Q9H4R4 102 aa11.55□□□□□ -0.56
NXF1-201ENST00000294172 BIN3Q9NQY0 253 aa11.55□□□□□ -0.56
NXF1-201ENST00000294172 SAA2-SAA4A0A096LPE2 208 aa11.55□□□□□ -0.56
NXF1-201ENST00000294172 C7orf77A4D0Y5 90 aa11.55□□□□□ -0.56
NXF1-201ENST00000294172 PPIHO43447 177 aaKnown RBP11.55□□□□□ -0.56
NXF1-201ENST00000294172 HBE1P02100 147 aa11.55□□□□□ -0.56
NXF1-201ENST00000294172 SAA2P0DJI9 122 aaPredicted RBP11.55□□□□□ -0.56
NXF1-201ENST00000294172 ERVK-16P61578 105 aa11.55□□□□□ -0.56
NXF1-201ENST00000294172 NHLH1Q02575 133 aa11.55□□□□□ -0.56
NXF1-201ENST00000294172 SOHLH1Q5JUK2 328 aa11.55□□□□□ -0.56
NXF1-201ENST00000294172 TEX36Q5VZQ5 186 aa11.55□□□□□ -0.56
NXF1-201ENST00000294172 OR4A16Q8NH70 328 aa11.55□□□□□ -0.56
NXF1-201ENST00000294172 DIRC2Q96SL1 478 aa11.55□□□□□ -0.56
NXF1-201ENST00000294172 YLPM1P49750 1951 aaKnown RBP11.55□□□□□ -0.56
NXF1-201ENST00000294172 NKX6-3A6NJ46 265 aa11.54□□□□□ -0.56
NXF1-201ENST00000294172 PCP4L1A6NKN8 68 aa11.54□□□□□ -0.56
NXF1-201ENST00000294172 EIF3GO75821 320 aaKnown RBP eCLIP11.54□□□□□ -0.56
NXF1-201ENST00000294172 MMP23AO75900 390 aa11.54□□□□□ -0.56
NXF1-201ENST00000294172 FBP1P09467 338 aa11.54□□□□□ -0.56
NXF1-201ENST00000294172 DAOP14920 347 aa11.54□□□□□ -0.56
NXF1-201ENST00000294172 ERVFRD-1P60508 538 aa11.54□□□□□ -0.56
NXF1-201ENST00000294172 C15orf54Q8N8G6 183 aa11.54□□□□□ -0.56
NXF1-201ENST00000294172 NEUROG1Q92886 237 aa11.54□□□□□ -0.56
NXF1-201ENST00000294172 PSMG3Q9BT73 122 aaPredicted RBP11.54□□□□□ -0.56
NXF1-201ENST00000294172 EGLN1Q9GZT9 426 aa11.54□□□□□ -0.56
NXF1-201ENST00000294172 HCFC1P51610 2035 aa11.54□□□□□ -0.56
NXF1-201ENST00000294172 VSTM5A8MXK1 200 aa11.54□□□□□ -0.56
NXF1-201ENST00000294172 OR8U8P0C7N1 319 aa11.54□□□□□ -0.56
NXF1-201ENST00000294172 FGF8P55075 233 aaPredicted RBP11.54□□□□□ -0.56
NXF1-201ENST00000294172 MRPS11P82912 194 aaKnown RBP11.54□□□□□ -0.56
NXF1-201ENST00000294172 FAM216AQ8WUB2 273 aa11.54□□□□□ -0.56
NXF1-201ENST00000294172 VKORC1Q9BQB6 163 aa11.54□□□□□ -0.56
NXF1-201ENST00000294172 NGBQ9NPG2 151 aa11.54□□□□□ -0.56
NXF1-201ENST00000294172 IDI2-AS1Q9NZ38 188 aa11.54□□□□□ -0.56
NXF1-201ENST00000294172 GNG13Q9P2W3 67 aa11.54□□□□□ -0.56
NXF1-201ENST00000294172 KLF2Q9Y5W3 355 aaPredicted RBP11.54□□□□□ -0.56
NXF1-201ENST00000294172 PUS1Q9Y606 427 aaKnown RBP eCLIP11.54□□□□□ -0.56
NXF1-201ENST00000294172 DSCAML1Q8TD84 2053 aa11.54□□□□□ -0.56
NXF1-201ENST00000294172 TPRP12270 2363 aaKnown RBP11.53□□□□□ -0.56
NXF1-201ENST00000294172 TRAV3A0A0B4J244 114 aa11.53□□□□□ -0.56
NXF1-201ENST00000294172 TRAV38-1A0A0B4J264 116 aa11.53□□□□□ -0.56
NXF1-201ENST00000294172 NQO2P16083 231 aa11.53□□□□□ -0.56
NXF1-201ENST00000294172 SERF2P84101 59 aa11.53□□□□□ -0.56
NXF1-201ENST00000294172 ZNF726P1Q15940 193 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms