RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 B4DEV8 164 aa12.53□□□□□ -0.4
CCDC116-201ENST00000292779 HMGB3O15347 200 aaKnown RBP12.53□□□□□ -0.4
CCDC116-201ENST00000292779 ADH4P08319 380 aa12.53□□□□□ -0.4
CCDC116-201ENST00000292779 FGF7P21781 194 aa12.53□□□□□ -0.4
CCDC116-201ENST00000292779 ZNF83P51522 516 aa12.53□□□□□ -0.4
CCDC116-201ENST00000292779 PAX5Q02548 391 aa12.53□□□□□ -0.4
CCDC116-201ENST00000292779 MZT1Q08AG7 82 aa12.53□□□□□ -0.4
CCDC116-201ENST00000292779 NCR3LG1Q68D85 454 aa12.53□□□□□ -0.4
CCDC116-201ENST00000292779 TRAT1Q6PIZ9 186 aa12.53□□□□□ -0.4
CCDC116-201ENST00000292779 RPRMLQ8N4K4 120 aa12.53□□□□□ -0.4
CCDC116-201ENST00000292779 MRPL37Q9BZE1 423 aaKnown RBP12.53□□□□□ -0.4
CCDC116-201ENST00000292779 SEBOXQ9HB31 216 aaPredicted RBP12.53□□□□□ -0.4
CCDC116-201ENST00000292779 LAMP3Q9UQV4 416 aa12.53□□□□□ -0.4
CCDC116-201ENST00000292779 IGHV3OR15-7A0A075B7D8 119 aa12.53□□□□□ -0.4
CCDC116-201ENST00000292779 SRRM5B3KS81 715 aa12.53□□□□□ -0.4
CCDC116-201ENST00000292779 IFNA1P01562 189 aa12.53□□□□□ -0.4
CCDC116-201ENST00000292779 SMIM6P0DI80 62 aa12.53□□□□□ -0.4
CCDC116-201ENST00000292779 TFF3Q07654 80 aa12.53□□□□□ -0.4
CCDC116-201ENST00000292779 KIAA0141Q14154 515 aaPredicted RBP12.53□□□□□ -0.4
CCDC116-201ENST00000292779 SPRNQ5BIV9 151 aa12.53□□□□□ -0.4
CCDC116-201ENST00000292779 C1orf174Q8IYL3 243 aa12.53□□□□□ -0.4
CCDC116-201ENST00000292779 NANPQ8TBE9 248 aa12.53□□□□□ -0.4
CCDC116-201ENST00000292779 CIB3Q96Q77 187 aaPredicted RBP12.53□□□□□ -0.4
CCDC116-201ENST00000292779 SLC25A22Q9H936 323 aa12.53□□□□□ -0.4
CCDC116-201ENST00000292779 PROP1O75360 226 aa12.52□□□□□ -0.41
CCDC116-201ENST00000292779 S100A9P06702 114 aaKnown RBP12.52□□□□□ -0.41
CCDC116-201ENST00000292779 GPR12P47775 334 aa12.52□□□□□ -0.41
CCDC116-201ENST00000292779 PNRC1Q12796 327 aaPredicted RBP12.52□□□□□ -0.41
CCDC116-201ENST00000292779 ZNF674Q2M3X9 581 aa12.52□□□□□ -0.41
CCDC116-201ENST00000292779 FAM169BQ8N8A8 192 aa12.52□□□□□ -0.41
CCDC116-201ENST00000292779 R3HDM4Q96D70 268 aa12.52□□□□□ -0.41
CCDC116-201ENST00000292779 SDF2L1Q9HCN8 221 aa12.52□□□□□ -0.41
CCDC116-201ENST00000292779 RP1L1Q8IWN7 2480 aaPredicted RBP12.52□□□□□ -0.41
CCDC116-201ENST00000292779 DUTP33316 252 aaKnown RBP12.51□□□□□ -0.41
CCDC116-201ENST00000292779 NCMAPQ5T1S8 102 aa12.51□□□□□ -0.41
CCDC116-201ENST00000292779 ZNF474Q6S9Z5 364 aaPredicted RBP12.51□□□□□ -0.41
CCDC116-201ENST00000292779 GCSAMQ8N6F7 178 aa12.51□□□□□ -0.41
CCDC116-201ENST00000292779 EDARADDQ8WWZ3 215 aa12.51□□□□□ -0.41
CCDC116-201ENST00000292779 QTRT1Q9BXR0 403 aaKnown RBP12.51□□□□□ -0.41
CCDC116-201ENST00000292779 TMPRSS5Q9H3S3 457 aa12.51□□□□□ -0.41
CCDC116-201ENST00000292779 GNG12Q9UBI6 72 aa12.51□□□□□ -0.41
CCDC116-201ENST00000292779 SMG1Q96Q15 3661 aaKnown RBP12.51□□□□□ -0.41
CCDC116-201ENST00000292779 M0R1B8 84 aa12.51□□□□□ -0.41
CCDC116-201ENST00000292779 CYB5BO43169 146 aa12.51□□□□□ -0.41
CCDC116-201ENST00000292779 OR9G9P0C7N8 305 aa12.51□□□□□ -0.41
CCDC116-201ENST00000292779 GZMHP20718 246 aa12.51□□□□□ -0.41
CCDC116-201ENST00000292779 CD81P60033 236 aa12.51□□□□□ -0.41
CCDC116-201ENST00000292779 PMS2P11Q13670 270 aa12.51□□□□□ -0.41
CCDC116-201ENST00000292779 MORN2Q502X0 79 aa12.51□□□□□ -0.41
CCDC116-201ENST00000292779 FFAR4Q5NUL3 377 aa12.51□□□□□ -0.41
CCDC116-201ENST00000292779 IGFL3Q6UXB1 125 aa12.51□□□□□ -0.41
CCDC116-201ENST00000292779 OR10G9Q8NGN4 311 aa12.51□□□□□ -0.41
CCDC116-201ENST00000292779 OR10G7Q8NGN6 311 aa12.51□□□□□ -0.41
CCDC116-201ENST00000292779 S100PBPQ96BU1 408 aa12.51□□□□□ -0.41
CCDC116-201ENST00000292779 FAM215AQ9Y5M1 114 aa12.51□□□□□ -0.41
CCDC116-201ENST00000292779 FCGR3BO75015 233 aa12.5□□□□□ -0.41
CCDC116-201ENST00000292779 CLN5O75503 358 aa12.5□□□□□ -0.41
CCDC116-201ENST00000292779 IGHV3-13P01766 116 aa12.5□□□□□ -0.41
CCDC116-201ENST00000292779 IGHV3-7P01780 117 aa12.5□□□□□ -0.41
CCDC116-201ENST00000292779 C1QTNF9P0C862 333 aa12.5□□□□□ -0.41
CCDC116-201ENST00000292779 TLE1Q04724 770 aa12.5□□□□□ -0.41
CCDC116-201ENST00000292779 WDR25Q64LD2 544 aaPredicted RBP12.5□□□□□ -0.41
CCDC116-201ENST00000292779 ZNRF1Q8ND25 227 aa12.5□□□□□ -0.41
CCDC116-201ENST00000292779 SNX22Q96L94 193 aa12.5□□□□□ -0.41
CCDC116-201ENST00000292779 OR2V2Q96R30 315 aa12.5□□□□□ -0.41
CCDC116-201ENST00000292779 NPCDR1Q9BY65 106 aa12.5□□□□□ -0.41
CCDC116-201ENST00000292779 DSCAMO60469 2012 aa12.5□□□□□ -0.41
CCDC116-201ENST00000292779 CTXND1A0A1B0GTU2 59 aa12.5□□□□□ -0.41
CCDC116-201ENST00000292779 MGST3O14880 152 aa12.5□□□□□ -0.41
CCDC116-201ENST00000292779 CYB5R3P00387 301 aaPredicted RBP12.5□□□□□ -0.41
CCDC116-201ENST00000292779 MEF2BQ02080 365 aaPredicted RBP12.5□□□□□ -0.41
CCDC116-201ENST00000292779 VWC2Q2TAL6 325 aa12.5□□□□□ -0.41
CCDC116-201ENST00000292779 MOGAT3Q86VF5 341 aa12.5□□□□□ -0.41
CCDC116-201ENST00000292779 RBMXL3Q8N7X1 1067 aaKnown RBP12.5□□□□□ -0.41
CCDC116-201ENST00000292779 TCEAL7Q9BRU2 100 aa12.5□□□□□ -0.41
CCDC116-201ENST00000292779 FAM234AQ9H0X4 552 aa12.5□□□□□ -0.41
CCDC116-201ENST00000292779 JPT1Q9UK76 154 aa12.5□□□□□ -0.41
CCDC116-201ENST00000292779 TET2Q6N021 2002 aaPredicted RBP12.5□□□□□ -0.41
CCDC116-201ENST00000292779 C15orf62A8K5M9 175 aa12.49□□□□□ -0.41
CCDC116-201ENST00000292779 MBP02144 154 aa12.49□□□□□ -0.41
CCDC116-201ENST00000292779 GNB2P62879 340 aa12.49□□□□□ -0.41
CCDC116-201ENST00000292779 S100A12P80511 92 aa12.49□□□□□ -0.41
CCDC116-201ENST00000292779 VHLLQ6RSH7 139 aa12.49□□□□□ -0.41
CCDC116-201ENST00000292779 SSX9Q7RTT3 188 aa12.49□□□□□ -0.41
CCDC116-201ENST00000292779 FAM90A1Q86YD7 464 aa12.49□□□□□ -0.41
CCDC116-201ENST00000292779 TMEM242Q9NWH2 141 aa12.49□□□□□ -0.41
CCDC116-201ENST00000292779 TPRP12270 2363 aaKnown RBP12.49□□□□□ -0.41
CCDC116-201ENST00000292779 ICE1Q9Y2F5 2266 aa12.49□□□□□ -0.41
CCDC116-201ENST00000292779 K7ENP7 123 aa12.49□□□□□ -0.41
CCDC116-201ENST00000292779 M0R1X1 148 aa12.49□□□□□ -0.41
CCDC116-201ENST00000292779 CFHR2P36980 270 aa12.49□□□□□ -0.41
CCDC116-201ENST00000292779 EDDM3BP56851 147 aa12.49□□□□□ -0.41
CCDC116-201ENST00000292779 TBR1Q16650 682 aa12.49□□□□□ -0.41
CCDC116-201ENST00000292779 RPL39P5Q59GN2 51 aa12.49□□□□□ -0.41
CCDC116-201ENST00000292779 TIMM23BQ5SRD1 257 aa12.49□□□□□ -0.41
CCDC116-201ENST00000292779 Q6ZS92 163 aa12.49□□□□□ -0.41
CCDC116-201ENST00000292779 ZNF709Q8N972 641 aa12.49□□□□□ -0.41
CCDC116-201ENST00000292779 DSCAML1Q8TD84 2053 aa12.48□□□□□ -0.41
CCDC116-201ENST00000292779 CLDN34H7C241 214 aa12.48□□□□□ -0.41
CCDC116-201ENST00000292779 SPRY3O43610 288 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms