RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 LHFPL5Q8TAF8 219 aa17.49■□□□□ 0.39
PDLIM3-203ENST00000284771 SSX3Q99909 188 aa17.49■□□□□ 0.39
PDLIM3-203ENST00000284771 TMEM222Q9H0R3 208 aa17.49■□□□□ 0.39
PDLIM3-203ENST00000284771 LIN7CQ9NUP9 197 aaKnown RBP17.49■□□□□ 0.39
PDLIM3-203ENST00000284771 PRELID3BQ9Y3B1 194 aa17.49■□□□□ 0.39
PDLIM3-203ENST00000284771 H7C2Y5 167 aa17.48■□□□□ 0.39
PDLIM3-203ENST00000284771 SNRNP70P08621 437 aaKnown RBP17.48■□□□□ 0.39
PDLIM3-203ENST00000284771 UCP1P25874 307 aa17.48■□□□□ 0.39
PDLIM3-203ENST00000284771 MC5RP33032 325 aa17.48■□□□□ 0.39
PDLIM3-203ENST00000284771 ANKRD55Q3KP44 614 aa17.48■□□□□ 0.39
PDLIM3-203ENST00000284771 LYG2Q86SG7 212 aa17.48■□□□□ 0.39
PDLIM3-203ENST00000284771 MINDY2Q8NBR6 621 aa17.48■□□□□ 0.39
PDLIM3-203ENST00000284771 CDC42EP3Q9UKI2 254 aa17.48■□□□□ 0.39
PDLIM3-203ENST00000284771 KCNIP3Q9Y2W7 256 aa17.48■□□□□ 0.39
PDLIM3-203ENST00000284771 WASHC3Q9Y3C0 194 aa17.48■□□□□ 0.39
PDLIM3-203ENST00000284771 SRRM4A7MD48 611 aaKnown RBP17.48■□□□□ 0.39
PDLIM3-203ENST00000284771 IGKV1D-33P01593 117 aa17.48■□□□□ 0.39
PDLIM3-203ENST00000284771 IGKV1-33P01594 117 aa17.48■□□□□ 0.39
PDLIM3-203ENST00000284771 IL5P05113 134 aa17.48■□□□□ 0.39
PDLIM3-203ENST00000284771 DYNLT3P51808 116 aa17.48■□□□□ 0.39
PDLIM3-203ENST00000284771 TATDN3Q17R31 274 aa17.48■□□□□ 0.39
PDLIM3-203ENST00000284771 CASTOR1Q8WTX7 329 aa17.48■□□□□ 0.39
PDLIM3-203ENST00000284771 RBFOX2O43251 390 aaKnown RBP eCLIP17.47■□□□□ 0.39
PDLIM3-203ENST00000284771 CDS2O95674 445 aa17.47■□□□□ 0.39
PDLIM3-203ENST00000284771 CRYZL1O95825 349 aa17.47■□□□□ 0.39
PDLIM3-203ENST00000284771 DHFRP00374 187 aa17.47■□□□□ 0.39
PDLIM3-203ENST00000284771 IFNA2P01563 188 aa17.47■□□□□ 0.39
PDLIM3-203ENST00000284771 LPAR6P43657 344 aa17.47■□□□□ 0.39
PDLIM3-203ENST00000284771 EBI3Q14213 229 aa17.47■□□□□ 0.39
PDLIM3-203ENST00000284771 PDPNQ86YL7 162 aa17.47■□□□□ 0.39
PDLIM3-203ENST00000284771 A0A0A6YYJ9 748 aa17.46■□□□□ 0.39
PDLIM3-203ENST00000284771 S1PR2O95136 353 aa17.46■□□□□ 0.39
PDLIM3-203ENST00000284771 APOA2P02652 100 aa17.46■□□□□ 0.39
PDLIM3-203ENST00000284771 BRS3P32247 399 aa17.46■□□□□ 0.39
PDLIM3-203ENST00000284771 TAGLNQ01995 201 aaKnown RBP17.46■□□□□ 0.39
PDLIM3-203ENST00000284771 HNF4GQ14541 408 aa17.46■□□□□ 0.39
PDLIM3-203ENST00000284771 Q6YL49 198 aa17.46■□□□□ 0.39
PDLIM3-203ENST00000284771 TCTEX1D1Q8N7M0 179 aa17.46■□□□□ 0.39
PDLIM3-203ENST00000284771 EAF1Q96JC9 268 aaPredicted RBP17.46■□□□□ 0.39
PDLIM3-203ENST00000284771 DUS4LO95620 317 aaKnown RBP17.45■□□□□ 0.38
PDLIM3-203ENST00000284771 SRD5A1P18405 259 aa17.45■□□□□ 0.38
PDLIM3-203ENST00000284771 CNTFRP26992 372 aa17.45■□□□□ 0.38
PDLIM3-203ENST00000284771 IER3P46695 156 aa17.45■□□□□ 0.38
PDLIM3-203ENST00000284771 RTL8BQ17RB0 113 aa17.45■□□□□ 0.38
PDLIM3-203ENST00000284771 LRRC75BQ2VPJ9 315 aa17.45■□□□□ 0.38
PDLIM3-203ENST00000284771 TMEM177Q53S58 311 aa17.45■□□□□ 0.38
PDLIM3-203ENST00000284771 THNSL2Q86YJ6 484 aa17.45■□□□□ 0.38
PDLIM3-203ENST00000284771 OR4C13Q8NGP0 309 aa17.45■□□□□ 0.38
PDLIM3-203ENST00000284771 CD300LFQ8TDQ1 290 aa17.45■□□□□ 0.38
PDLIM3-203ENST00000284771 FLYWCH2Q96CP2 140 aaKnown RBP17.45■□□□□ 0.38
PDLIM3-203ENST00000284771 TMEM56Q96MV1 263 aa17.45■□□□□ 0.38
PDLIM3-203ENST00000284771 FAM212BQ9NTI7 297 aaPredicted RBP17.45■□□□□ 0.38
PDLIM3-203ENST00000284771 TMEM56-RWDD3S4R434 201 aa17.45■□□□□ 0.38
PDLIM3-203ENST00000284771 H3BUX3 64 aa17.45■□□□□ 0.38
PDLIM3-203ENST00000284771 HPRT1P00492 218 aa17.45■□□□□ 0.38
PDLIM3-203ENST00000284771 IGHV4-59P01825 116 aa17.45■□□□□ 0.38
PDLIM3-203ENST00000284771 RRASP10301 218 aa17.45■□□□□ 0.38
PDLIM3-203ENST00000284771 KIR2DS2P43631 304 aa17.45■□□□□ 0.38
PDLIM3-203ENST00000284771 ARHGDIBP52566 201 aa17.45■□□□□ 0.38
PDLIM3-203ENST00000284771 AANATQ16613 207 aa17.45■□□□□ 0.38
PDLIM3-203ENST00000284771 LIN54Q6MZP7 749 aa17.45■□□□□ 0.38
PDLIM3-203ENST00000284771 LIAT1Q6ZQX7 453 aa17.45■□□□□ 0.38
PDLIM3-203ENST00000284771 VKORC1L1Q8N0U8 176 aa17.45■□□□□ 0.38
PDLIM3-203ENST00000284771 Q8N6K4 173 aa17.45■□□□□ 0.38
PDLIM3-203ENST00000284771 SIGLECL1Q8N7X8 197 aa17.45■□□□□ 0.38
PDLIM3-203ENST00000284771 OR4S2Q8NH73 311 aa17.45■□□□□ 0.38
PDLIM3-203ENST00000284771 ZNF431Q8TF32 576 aaPredicted RBP17.45■□□□□ 0.38
PDLIM3-203ENST00000284771 PLEKHA2Q9HB19 425 aa17.45■□□□□ 0.38
PDLIM3-203ENST00000284771 C7orf66A4D0T2 115 aa17.44■□□□□ 0.38
PDLIM3-203ENST00000284771 PRAF2O60831 178 aa17.44■□□□□ 0.38
PDLIM3-203ENST00000284771 B3GALNT1O75752 331 aa17.44■□□□□ 0.38
PDLIM3-203ENST00000284771 SERPINE2P07093 398 aa17.44■□□□□ 0.38
PDLIM3-203ENST00000284771 F2RL1P55085 397 aa17.44■□□□□ 0.38
PDLIM3-203ENST00000284771 HES1Q14469 280 aa17.44■□□□□ 0.38
PDLIM3-203ENST00000284771 Q6ZNX1 250 aa17.44■□□□□ 0.38
PDLIM3-203ENST00000284771 SELENOHQ8IZQ5 122 aaKnown RBP17.44■□□□□ 0.38
PDLIM3-203ENST00000284771 MITD1Q8WV92 249 aa17.44■□□□□ 0.38
PDLIM3-203ENST00000284771 ALG5Q9Y673 324 aa17.44■□□□□ 0.38
PDLIM3-203ENST00000284771 MOSP00540 346 aa17.43■□□□□ 0.38
PDLIM3-203ENST00000284771 IGLV2-23P01705 113 aa17.43■□□□□ 0.38
PDLIM3-203ENST00000284771 FAM106CPP0CH98 169 aa17.43■□□□□ 0.38
PDLIM3-203ENST00000284771 ANXA3P12429 323 aa17.43■□□□□ 0.38
PDLIM3-203ENST00000284771 CBX3Q13185 183 aa17.43■□□□□ 0.38
PDLIM3-203ENST00000284771 DHRS7BQ6IAN0 325 aaPredicted RBP17.43■□□□□ 0.38
PDLIM3-203ENST00000284771 ZDHHC16Q969W1 377 aa17.43■□□□□ 0.38
PDLIM3-203ENST00000284771 PLSCR3Q9NRY6 295 aa17.43■□□□□ 0.38
PDLIM3-203ENST00000284771 RPA2P15927 270 aa17.42■□□□□ 0.38
PDLIM3-203ENST00000284771 RPS16P62249 146 aaKnown RBP17.42■□□□□ 0.38
PDLIM3-203ENST00000284771 LRTM2Q8N967 370 aa17.42■□□□□ 0.38
PDLIM3-203ENST00000284771 OR2T10Q8NGZ9 312 aa17.42■□□□□ 0.38
PDLIM3-203ENST00000284771 OSR1Q8TAX0 266 aaPredicted RBP17.42■□□□□ 0.38
PDLIM3-203ENST00000284771 SEC22AQ96IW7 307 aa17.42■□□□□ 0.38
PDLIM3-203ENST00000284771 TNCP24821 2201 aa17.42■□□□□ 0.38
PDLIM3-203ENST00000284771 PLXNB1O43157 2135 aa17.42■□□□□ 0.38
PDLIM3-203ENST00000284771 SNRPGP15A8MWD9 76 aa17.42■□□□□ 0.38
PDLIM3-203ENST00000284771 SHOXO15266 292 aa17.42■□□□□ 0.38
PDLIM3-203ENST00000284771 HOXA3O43365 443 aaPredicted RBP17.42■□□□□ 0.38
PDLIM3-203ENST00000284771 CRLF1O75462 422 aa17.42■□□□□ 0.38
PDLIM3-203ENST00000284771 KRASP01116 189 aa17.42■□□□□ 0.38
PDLIM3-203ENST00000284771 G6PCP35575 357 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms