RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 CEACAM18A8MTB9 384 aa14.14□□□□□ -0.15
SH3RF1-201ENST00000284637 H3BVH4 76 aa14.14□□□□□ -0.15
SH3RF1-201ENST00000284637 OTX1P32242 354 aaPredicted RBP14.14□□□□□ -0.15
SH3RF1-201ENST00000284637 ZNF818PQ6ZRF7 136 aa14.14□□□□□ -0.15
SH3RF1-201ENST00000284637 OR8B3Q8NGG8 313 aa14.14□□□□□ -0.15
SH3RF1-201ENST00000284637 AKAP6Q13023 2319 aa14.13□□□□□ -0.15
SH3RF1-201ENST00000284637 KLF4O43474 513 aa14.13□□□□□ -0.15
SH3RF1-201ENST00000284637 ZG16O60844 167 aa14.13□□□□□ -0.15
SH3RF1-201ENST00000284637 SRIP30626 198 aa14.13□□□□□ -0.15
SH3RF1-201ENST00000284637 NPBWR2P48146 333 aa14.13□□□□□ -0.15
SH3RF1-201ENST00000284637 UCP2P55851 309 aa14.13□□□□□ -0.15
SH3RF1-201ENST00000284637 RTP5Q14D33 572 aa14.13□□□□□ -0.15
SH3RF1-201ENST00000284637 ZNF841Q6ZN19 808 aa14.13□□□□□ -0.15
SH3RF1-201ENST00000284637 CCL13Q99616 98 aa14.13□□□□□ -0.15
SH3RF1-201ENST00000284637 ATAD5Q96QE3 1844 aa14.13□□□□□ -0.15
SH3RF1-201ENST00000284637 MGST3O14880 152 aa14.13□□□□□ -0.15
SH3RF1-201ENST00000284637 CD5P06127 495 aa14.13□□□□□ -0.15
SH3RF1-201ENST00000284637 MYOZ3Q8TDC0 251 aa14.13□□□□□ -0.15
SH3RF1-201ENST00000284637 RAB37Q96AX2 223 aa14.13□□□□□ -0.15
SH3RF1-201ENST00000284637 HIGD1AQ9Y241 93 aa14.13□□□□□ -0.15
SH3RF1-201ENST00000284637 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.13□□□□□ -0.15
SH3RF1-201ENST00000284637 TBX6O95947 436 aaPredicted RBP14.13□□□□□ -0.15
SH3RF1-201ENST00000284637 SSTR5P35346 364 aa14.13□□□□□ -0.15
SH3RF1-201ENST00000284637 ZNF645Q8N7E2 425 aa14.13□□□□□ -0.15
SH3RF1-201ENST00000284637 SLC25A10Q9UBX3 287 aaPredicted RBP14.13□□□□□ -0.15
SH3RF1-201ENST00000284637 IGHV3-72A0A0B4J1Y9 119 aa14.13□□□□□ -0.15
SH3RF1-201ENST00000284637 C21orf140B9A014 251 aa14.13□□□□□ -0.15
SH3RF1-201ENST00000284637 EGR1P18146 543 aa14.13□□□□□ -0.15
SH3RF1-201ENST00000284637 HERVK_113P61574 105 aa14.13□□□□□ -0.15
SH3RF1-201ENST00000284637 RSPO4Q2I0M5 234 aaPredicted RBP14.13□□□□□ -0.15
SH3RF1-201ENST00000284637 SAMD13Q5VXD3 122 aa14.13□□□□□ -0.15
SH3RF1-201ENST00000284637 OR8B2Q96RD0 313 aa14.13□□□□□ -0.15
SH3RF1-201ENST00000284637 QTRT1Q9BXR0 403 aaKnown RBP14.13□□□□□ -0.15
SH3RF1-201ENST00000284637 MARCH11A6NNE9 402 aa14.12□□□□□ -0.15
SH3RF1-201ENST00000284637 K7N7A8 449 aa14.12□□□□□ -0.15
SH3RF1-201ENST00000284637 MPV17P39210 176 aa14.12□□□□□ -0.15
SH3RF1-201ENST00000284637 HCP5Q6MZN7 132 aa14.12□□□□□ -0.15
SH3RF1-201ENST00000284637 WDYHV1Q96HA8 205 aa14.12□□□□□ -0.15
SH3RF1-201ENST00000284637 PMCHL2Q9BQD1 86 aa14.12□□□□□ -0.15
SH3RF1-201ENST00000284637 HLA-DRB1P01911 266 aa14.12□□□□□ -0.15
SH3RF1-201ENST00000284637 ADRA2AP08913 450 aa14.12□□□□□ -0.15
SH3RF1-201ENST00000284637 ARL14EPLP0DKL9 152 aa14.11□□□□□ -0.15
SH3RF1-201ENST00000284637 HOXA4Q00056 320 aaPredicted RBP14.11□□□□□ -0.15
SH3RF1-201ENST00000284637 FBLN7Q53RD9 439 aa14.11□□□□□ -0.15
SH3RF1-201ENST00000284637 KRTCAP3Q53RY4 240 aa14.11□□□□□ -0.15
SH3RF1-201ENST00000284637 DNLZQ5SXM8 178 aa14.11□□□□□ -0.15
SH3RF1-201ENST00000284637 TMEM170AQ8WVE7 144 aa14.11□□□□□ -0.15
SH3RF1-201ENST00000284637 ZNF430Q9H8G1 570 aaPredicted RBP14.11□□□□□ -0.15
SH3RF1-201ENST00000284637 TNFRSF19Q9NS68 423 aa14.11□□□□□ -0.15
SH3RF1-201ENST00000284637 PGPA6NDG6 321 aa14.11□□□□□ -0.15
SH3RF1-201ENST00000284637 CLDN18P56856 261 aa14.11□□□□□ -0.15
SH3RF1-201ENST00000284637 NUDT11Q96G61 164 aa14.11□□□□□ -0.15
SH3RF1-201ENST00000284637 MARS2Q96GW9 593 aaKnown RBP14.11□□□□□ -0.15
SH3RF1-201ENST00000284637 RNF126Q9BV68 326 aa14.11□□□□□ -0.15
SH3RF1-201ENST00000284637 SDF2L1Q9HCN8 221 aa14.11□□□□□ -0.15
SH3RF1-201ENST00000284637 FAM90A10PA6NDY2 464 aa14.11□□□□□ -0.15
SH3RF1-201ENST00000284637 FAM90A18PA6NE21 464 aa14.11□□□□□ -0.15
SH3RF1-201ENST00000284637 FAM90A16PA6NEW6 464 aa14.11□□□□□ -0.15
SH3RF1-201ENST00000284637 FAM90A20PA6NIJ5 464 aa14.11□□□□□ -0.15
SH3RF1-201ENST00000284637 FAM90A8PA6NJQ4 464 aa14.11□□□□□ -0.15
SH3RF1-201ENST00000284637 FAM90A7PA6NKC0 464 aa14.11□□□□□ -0.15
SH3RF1-201ENST00000284637 FAM90A22PA8MWA6 464 aa14.11□□□□□ -0.15
SH3RF1-201ENST00000284637 FAM90A12PA8MX19 464 aa14.11□□□□□ -0.15
SH3RF1-201ENST00000284637 FAM90A5PA8MXJ8 464 aa14.11□□□□□ -0.15
SH3RF1-201ENST00000284637 FAM90A23PA8MXZ1 464 aa14.11□□□□□ -0.15
SH3RF1-201ENST00000284637 FAM90A15PP0C7V4 464 aa14.11□□□□□ -0.15
SH3RF1-201ENST00000284637 FAM90A13PP0C7W8 464 aa14.11□□□□□ -0.15
SH3RF1-201ENST00000284637 FAM90A14PP0C7W9 464 aa14.11□□□□□ -0.15
SH3RF1-201ENST00000284637 FAM90A24PP0C7X0 464 aa14.11□□□□□ -0.15
SH3RF1-201ENST00000284637 SPANXN1Q5VSR9 72 aa14.11□□□□□ -0.15
SH3RF1-201ENST00000284637 SMRP1Q8NCR6 262 aa14.11□□□□□ -0.15
SH3RF1-201ENST00000284637 DUSP15Q9H1R2 295 aaPredicted RBP14.11□□□□□ -0.15
SH3RF1-201ENST00000284637 RPRMQ9NS64 109 aa14.11□□□□□ -0.15
SH3RF1-201ENST00000284637 C1QL2Q7Z5L3 287 aa14.1□□□□□ -0.15
SH3RF1-201ENST00000284637 PSMG3Q9BT73 122 aaPredicted RBP14.1□□□□□ -0.15
SH3RF1-201ENST00000284637 FAM117AQ9C073 453 aa14.1□□□□□ -0.15
SH3RF1-201ENST00000284637 MARF1Q9Y4F3 1742 aaKnown RBP14.1□□□□□ -0.15
SH3RF1-201ENST00000284637 F2RL2O00254 374 aa14.1□□□□□ -0.15
SH3RF1-201ENST00000284637 DLX1P56177 255 aa14.1□□□□□ -0.15
SH3RF1-201ENST00000284637 KLF7O75840 302 aaPredicted RBP14.1□□□□□ -0.15
SH3RF1-201ENST00000284637 BTF3P20290 206 aaKnown RBP14.1□□□□□ -0.15
SH3RF1-201ENST00000284637 SFRP2Q96HF1 295 aa14.1□□□□□ -0.15
SH3RF1-201ENST00000284637 SGK494Q96LW2 274 aa14.1□□□□□ -0.15
SH3RF1-201ENST00000284637 TMEM106BQ9NUM4 274 aa14.1□□□□□ -0.15
SH3RF1-201ENST00000284637 C1RLQ9NZP8 487 aa14.1□□□□□ -0.15
SH3RF1-201ENST00000284637 NUDT3O95989 172 aa14.1□□□□□ -0.15
SH3RF1-201ENST00000284637 AMY1AP04745 511 aa14.1□□□□□ -0.15
SH3RF1-201ENST00000284637 ZNF735P0CB33 412 aa14.1□□□□□ -0.15
SH3RF1-201ENST00000284637 CBLN1P23435 193 aa14.1□□□□□ -0.15
SH3RF1-201ENST00000284637 CRYBB3P26998 211 aa14.1□□□□□ -0.15
SH3RF1-201ENST00000284637 TWIST1Q15672 202 aa14.1□□□□□ -0.15
SH3RF1-201ENST00000284637 LDLRAD2Q5SZI1 272 aa14.1□□□□□ -0.15
SH3RF1-201ENST00000284637 S1PR2O95136 353 aa14.09□□□□□ -0.15
SH3RF1-201ENST00000284637 MAJINQ3KP22 176 aa14.09□□□□□ -0.15
SH3RF1-201ENST00000284637 IGHV1-45A0A0A0MS14 117 aa14.09□□□□□ -0.15
SH3RF1-201ENST00000284637 ECSCRQ19T08 205 aa14.09□□□□□ -0.15
SH3RF1-201ENST00000284637 WNT10AQ9GZT5 417 aa14.09□□□□□ -0.15
SH3RF1-201ENST00000284637 MS4A5Q9H3V2 200 aa14.09□□□□□ -0.15
SH3RF1-201ENST00000284637 TBL2Q9Y4P3 447 aaKnown RBP14.09□□□□□ -0.15
SH3RF1-201ENST00000284637 A6NNC1 897 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms