RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 C1QTNF5Q9BXJ0 243 aa9.54□□□□□ -0.88
SCLT1-201ENST00000281142 PRRG4Q9BZD6 226 aa9.54□□□□□ -0.88
SCLT1-201ENST00000281142 YLPM1P49750 1951 aaKnown RBP9.54□□□□□ -0.88
SCLT1-201ENST00000281142 MGAQ8IWI9 3026 aa9.54□□□□□ -0.88
SCLT1-201ENST00000281142 TMEM250H0YL14 139 aa9.54□□□□□ -0.88
SCLT1-201ENST00000281142 KLK10O43240 276 aa9.54□□□□□ -0.88
SCLT1-201ENST00000281142 RHBDL1O75783 438 aa9.54□□□□□ -0.88
SCLT1-201ENST00000281142 CHRNB4P30926 498 aa9.54□□□□□ -0.88
SCLT1-201ENST00000281142 ATP5G3P48201 142 aa9.54□□□□□ -0.88
SCLT1-201ENST00000281142 B3GALT5-AS1P59052 145 aa9.54□□□□□ -0.88
SCLT1-201ENST00000281142 Q0VFX4 171 aa9.54□□□□□ -0.88
SCLT1-201ENST00000281142 ACOT6Q3I5F7 207 aaPredicted RBP9.54□□□□□ -0.88
SCLT1-201ENST00000281142 CISD2Q8N5K1 135 aaKnown RBP9.54□□□□□ -0.88
SCLT1-201ENST00000281142 SPSB4Q96A44 273 aa9.54□□□□□ -0.88
SCLT1-201ENST00000281142 IMMP2LQ96T52 175 aa9.54□□□□□ -0.88
SCLT1-201ENST00000281142 MANBALQ9NQG1 85 aa9.54□□□□□ -0.88
SCLT1-201ENST00000281142 PAM16Q9Y3D7 125 aa9.54□□□□□ -0.88
SCLT1-201ENST00000281142 C5orf49A4QMS7 147 aa9.54□□□□□ -0.88
SCLT1-201ENST00000281142 ITGB1BP1O14713 200 aa9.54□□□□□ -0.88
SCLT1-201ENST00000281142 RAMP3O60896 148 aa9.54□□□□□ -0.88
SCLT1-201ENST00000281142 TNFSF13O75888 250 aa9.54□□□□□ -0.88
SCLT1-201ENST00000281142 SLC25A6P12236 298 aa9.54□□□□□ -0.88
SCLT1-201ENST00000281142 CEACAM8P31997 349 aaPredicted RBP9.54□□□□□ -0.88
SCLT1-201ENST00000281142 RAC3P60763 192 aa9.54□□□□□ -0.88
SCLT1-201ENST00000281142 COL5A1-AS1Q5SY13 56 aa9.54□□□□□ -0.88
SCLT1-201ENST00000281142 MKXQ8IYA7 352 aa9.54□□□□□ -0.88
SCLT1-201ENST00000281142 ZDHHC16Q969W1 377 aa9.54□□□□□ -0.88
SCLT1-201ENST00000281142 SPENQ96T58 3664 aaKnown RBP9.53□□□□□ -0.88
SCLT1-201ENST00000281142 CTXND1A0A1B0GTU2 59 aa9.53□□□□□ -0.88
SCLT1-201ENST00000281142 FAM90A10PA6NDY2 464 aa9.53□□□□□ -0.88
SCLT1-201ENST00000281142 FAM90A18PA6NE21 464 aa9.53□□□□□ -0.88
SCLT1-201ENST00000281142 FAM90A16PA6NEW6 464 aa9.53□□□□□ -0.88
SCLT1-201ENST00000281142 FAM90A20PA6NIJ5 464 aa9.53□□□□□ -0.88
SCLT1-201ENST00000281142 FAM90A8PA6NJQ4 464 aa9.53□□□□□ -0.88
SCLT1-201ENST00000281142 FAM90A7PA6NKC0 464 aa9.53□□□□□ -0.88
SCLT1-201ENST00000281142 FAM90A22PA8MWA6 464 aa9.53□□□□□ -0.88
SCLT1-201ENST00000281142 FAM90A12PA8MX19 464 aa9.53□□□□□ -0.88
SCLT1-201ENST00000281142 FAM90A5PA8MXJ8 464 aa9.53□□□□□ -0.88
SCLT1-201ENST00000281142 FAM90A23PA8MXZ1 464 aa9.53□□□□□ -0.88
SCLT1-201ENST00000281142 CCL25O15444 150 aa9.53□□□□□ -0.88
SCLT1-201ENST00000281142 YPEL1O60688 119 aa9.53□□□□□ -0.88
SCLT1-201ENST00000281142 TYMSP04818 313 aa9.53□□□□□ -0.88
SCLT1-201ENST00000281142 CTXN2P0C2S0 81 aa9.53□□□□□ -0.88
SCLT1-201ENST00000281142 FAM90A15PP0C7V4 464 aa9.53□□□□□ -0.88
SCLT1-201ENST00000281142 FAM90A13PP0C7W8 464 aa9.53□□□□□ -0.88
SCLT1-201ENST00000281142 FAM90A14PP0C7W9 464 aa9.53□□□□□ -0.88
SCLT1-201ENST00000281142 FAM90A24PP0C7X0 464 aa9.53□□□□□ -0.88
SCLT1-201ENST00000281142 ADMP35318 185 aa9.53□□□□□ -0.88
SCLT1-201ENST00000281142 LSM10Q969L4 123 aaKnown RBP9.53□□□□□ -0.88
SCLT1-201ENST00000281142 YPEL2Q96QA6 119 aa9.53□□□□□ -0.88
SCLT1-201ENST00000281142 DKK4Q9UBT3 224 aa9.53□□□□□ -0.88
SCLT1-201ENST00000281142 URB1O60287 2271 aaKnown RBP9.53□□□□□ -0.88
SCLT1-201ENST00000281142 C11orf94C9JXX5 98 aa9.53□□□□□ -0.88
SCLT1-201ENST00000281142 RBFOX2O43251 390 aaKnown RBP eCLIP9.53□□□□□ -0.88
SCLT1-201ENST00000281142 S100GP29377 79 aa9.53□□□□□ -0.88
SCLT1-201ENST00000281142 CDKN1AP38936 164 aa9.53□□□□□ -0.88
SCLT1-201ENST00000281142 GNB1P62873 340 aa9.53□□□□□ -0.88
SCLT1-201ENST00000281142 SRSF7Q16629 238 aaKnown RBP eCLIP9.53□□□□□ -0.88
SCLT1-201ENST00000281142 ACSF3Q4G176 576 aaPredicted RBP9.53□□□□□ -0.88
SCLT1-201ENST00000281142 WIPI1Q5MNZ9 446 aaPredicted RBP9.53□□□□□ -0.88
SCLT1-201ENST00000281142 TMEM14EPQ6UXP3 125 aa9.53□□□□□ -0.88
SCLT1-201ENST00000281142 Q6ZWC4 215 aa9.53□□□□□ -0.88
SCLT1-201ENST00000281142 LINC01551Q86U37 167 aa9.53□□□□□ -0.88
SCLT1-201ENST00000281142 FGFRL1Q8N441 504 aa9.53□□□□□ -0.88
SCLT1-201ENST00000281142 OR10D3Q8NH80 312 aa9.53□□□□□ -0.88
SCLT1-201ENST00000281142 ANAPC16Q96DE5 110 aa9.53□□□□□ -0.88
SCLT1-201ENST00000281142 NEIL1Q96FI4 390 aaPredicted RBP9.53□□□□□ -0.88
SCLT1-201ENST00000281142 ZNF391Q9UJN7 358 aa9.53□□□□□ -0.88
SCLT1-201ENST00000281142 TP53TG3Q9ULZ0 132 aa9.53□□□□□ -0.88
SCLT1-201ENST00000281142 DOCK10Q96BY6 2186 aa9.53□□□□□ -0.88
SCLT1-201ENST00000281142 APC2O95996 2303 aa9.53□□□□□ -0.88
SCLT1-201ENST00000281142 ATMQ13315 3056 aa9.52□□□□□ -0.88
SCLT1-201ENST00000281142 F2Z2F3 143 aa9.52□□□□□ -0.88
SCLT1-201ENST00000281142 KRASP01116 189 aa9.52□□□□□ -0.88
SCLT1-201ENST00000281142 FRMD6-AS1P0C7T7 363 aa9.52□□□□□ -0.88
SCLT1-201ENST00000281142 G6PCP35575 357 aa9.52□□□□□ -0.88
SCLT1-201ENST00000281142 LINC00310P59036 64 aa9.52□□□□□ -0.88
SCLT1-201ENST00000281142 LINC00205P59089 165 aa9.52□□□□□ -0.88
SCLT1-201ENST00000281142 CEACAM21Q3KPI0 293 aa9.52□□□□□ -0.88
SCLT1-201ENST00000281142 TPTE2P1Q5T6R2 138 aa9.52□□□□□ -0.88
SCLT1-201ENST00000281142 TEX43Q6ZNM6 134 aa9.52□□□□□ -0.88
SCLT1-201ENST00000281142 MRPL21Q7Z2W9 205 aaKnown RBP9.52□□□□□ -0.88
SCLT1-201ENST00000281142 MSL2Q9HCI7 577 aa9.52□□□□□ -0.88
SCLT1-201ENST00000281142 MED13Q9UHV7 2174 aa9.52□□□□□ -0.88
SCLT1-201ENST00000281142 NDUFB4O95168 129 aa9.52□□□□□ -0.89
SCLT1-201ENST00000281142 NDUFB8O95169 186 aa9.52□□□□□ -0.89
SCLT1-201ENST00000281142 SRP14P37108 136 aaKnown RBP9.52□□□□□ -0.89
SCLT1-201ENST00000281142 CDKN1BP46527 198 aa9.52□□□□□ -0.89
SCLT1-201ENST00000281142 ZNF816Q0VGE8 651 aaPredicted RBP9.52□□□□□ -0.89
SCLT1-201ENST00000281142 SF3B5Q9BWJ5 86 aaKnown RBP9.52□□□□□ -0.89
SCLT1-201ENST00000281142 PXMP4Q9Y6I8 212 aa9.52□□□□□ -0.89
SCLT1-201ENST00000281142 TRAV38-1A0A0B4J264 116 aa9.52□□□□□ -0.89
SCLT1-201ENST00000281142 SIRPB1O00241 398 aa9.52□□□□□ -0.89
SCLT1-201ENST00000281142 TRAPPC6AO75865 159 aa9.52□□□□□ -0.89
SCLT1-201ENST00000281142 WNT2P09544 360 aa9.52□□□□□ -0.89
SCLT1-201ENST00000281142 IGF2RP11717 2491 aa9.52□□□□□ -0.89
SCLT1-201ENST00000281142 SSR4P51571 173 aa9.52□□□□□ -0.89
SCLT1-201ENST00000281142 PPP1CBP62140 327 aa9.52□□□□□ -0.89
SCLT1-201ENST00000281142 SELENOTP62341 195 aa9.52□□□□□ -0.89
SCLT1-201ENST00000281142 HOXA4Q00056 320 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms