RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 S100A8P05109 93 aa12.14□□□□□ -0.47
TMEM47-201ENST00000275954 MMP7P09237 267 aaPredicted RBP12.14□□□□□ -0.47
TMEM47-201ENST00000275954 NTF3P20783 257 aa12.14□□□□□ -0.47
TMEM47-201ENST00000275954 WNT5AP41221 380 aa12.14□□□□□ -0.47
TMEM47-201ENST00000275954 GALR1P47211 349 aa12.14□□□□□ -0.47
TMEM47-201ENST00000275954 RPRMLQ8N4K4 120 aa12.14□□□□□ -0.47
TMEM47-201ENST00000275954 VAX2Q9UIW0 290 aa12.14□□□□□ -0.47
TMEM47-201ENST00000275954 ZNF835Q9Y2P0 537 aa12.14□□□□□ -0.47
TMEM47-201ENST00000275954 PPIHO43447 177 aaKnown RBP12.14□□□□□ -0.47
TMEM47-201ENST00000275954 TRAT1Q6PIZ9 186 aa12.14□□□□□ -0.47
TMEM47-201ENST00000275954 OR4P4Q8NGL7 312 aa12.14□□□□□ -0.47
TMEM47-201ENST00000275954 SNX22Q96L94 193 aa12.14□□□□□ -0.47
TMEM47-201ENST00000275954 TMPRSS5Q9H3S3 457 aa12.14□□□□□ -0.47
TMEM47-201ENST00000275954 ZDHHC11Q9H8X9 412 aa12.14□□□□□ -0.47
TMEM47-201ENST00000275954 ONECUT1Q9UBC0 465 aa12.14□□□□□ -0.47
TMEM47-201ENST00000275954 TRAV38-1A0A0B4J264 116 aa12.13□□□□□ -0.47
TMEM47-201ENST00000275954 DUXBA0A1W2PPF3 345 aa12.13□□□□□ -0.47
TMEM47-201ENST00000275954 IGHV3-48P01763 117 aa12.13□□□□□ -0.47
TMEM47-201ENST00000275954 CT45A6P0DMU7 189 aa12.13□□□□□ -0.47
TMEM47-201ENST00000275954 CT45A5P0DMU8 189 aa12.13□□□□□ -0.47
TMEM47-201ENST00000275954 CT45A7P0DMV0 189 aa12.13□□□□□ -0.47
TMEM47-201ENST00000275954 CT45A1Q5HYN5 189 aa12.13□□□□□ -0.47
TMEM47-201ENST00000275954 C9orf152Q5JTZ5 239 aa12.13□□□□□ -0.47
TMEM47-201ENST00000275954 ABHD12Q8N2K0 398 aa12.13□□□□□ -0.47
TMEM47-201ENST00000275954 CT45A3Q8NHU0 189 aa12.13□□□□□ -0.47
TMEM47-201ENST00000275954 RYDENQ9NUL5 291 aaKnown RBP12.13□□□□□ -0.47
TMEM47-201ENST00000275954 MALRD1Q5VYJ5 2156 aa12.13□□□□□ -0.47
TMEM47-201ENST00000275954 TRAV24A0A0B4J272 114 aa12.13□□□□□ -0.47
TMEM47-201ENST00000275954 EGR1P18146 543 aa12.13□□□□□ -0.47
TMEM47-201ENST00000275954 FOXF2Q12947 444 aa12.13□□□□□ -0.47
TMEM47-201ENST00000275954 SLC35E3Q7Z769 313 aa12.13□□□□□ -0.47
TMEM47-201ENST00000275954 HARBI1Q96MB7 349 aa12.13□□□□□ -0.47
TMEM47-201ENST00000275954 TNFRSF19Q9NS68 423 aa12.13□□□□□ -0.47
TMEM47-201ENST00000275954 ORM2P19652 201 aa12.13□□□□□ -0.47
TMEM47-201ENST00000275954 UCP1P25874 307 aa12.13□□□□□ -0.47
TMEM47-201ENST00000275954 B2MP61769 119 aa12.13□□□□□ -0.47
TMEM47-201ENST00000275954 ATP6V1FQ16864 119 aa12.13□□□□□ -0.47
TMEM47-201ENST00000275954 TAF15Q92804 592 aaKnown RBP eCLIP12.13□□□□□ -0.47
TMEM47-201ENST00000275954 ZNF251Q9BRH9 671 aa12.13□□□□□ -0.47
TMEM47-201ENST00000275954 TUBD1Q9UJT1 453 aa12.13□□□□□ -0.47
TMEM47-201ENST00000275954 ZNF292O60281 2723 aa12.13□□□□□ -0.47
TMEM47-201ENST00000275954 MARCH11A6NNE9 402 aa12.12□□□□□ -0.47
TMEM47-201ENST00000275954 H0Y8G0 127 aa12.12□□□□□ -0.47
TMEM47-201ENST00000275954 NPY1RP25929 384 aa12.12□□□□□ -0.47
TMEM47-201ENST00000275954 OTX1P32242 354 aaPredicted RBP12.12□□□□□ -0.47
TMEM47-201ENST00000275954 ZDHHC16Q969W1 377 aa12.12□□□□□ -0.47
TMEM47-201ENST00000275954 GAL3ST2Q9H3Q3 398 aa12.12□□□□□ -0.47
TMEM47-201ENST00000275954 ANOS1P23352 680 aa12.12□□□□□ -0.47
TMEM47-201ENST00000275954 TNFRSF9Q07011 255 aa12.12□□□□□ -0.47
TMEM47-201ENST00000275954 OR13A1Q8NGR1 328 aa12.12□□□□□ -0.47
TMEM47-201ENST00000275954 BLNKQ8WV28 456 aa12.12□□□□□ -0.47
TMEM47-201ENST00000275954 C1orf147Q96MC9 270 aaPredicted RBP12.12□□□□□ -0.47
TMEM47-201ENST00000275954 BCL2P10415 239 aa12.12□□□□□ -0.47
TMEM47-201ENST00000275954 CHRNB4P30926 498 aa12.12□□□□□ -0.47
TMEM47-201ENST00000275954 TCL1AP56279 114 aa12.12□□□□□ -0.47
TMEM47-201ENST00000275954 RSPO1Q2MKA7 263 aaPredicted RBP12.12□□□□□ -0.47
TMEM47-201ENST00000275954 RPL39P5Q59GN2 51 aa12.12□□□□□ -0.47
TMEM47-201ENST00000275954 C1orf185Q5T7R7 199 aa12.12□□□□□ -0.47
TMEM47-201ENST00000275954 RPEQ96AT9 228 aa12.12□□□□□ -0.47
TMEM47-201ENST00000275954 FAM103A1Q9BTL3 118 aaKnown RBP12.12□□□□□ -0.47
TMEM47-201ENST00000275954 ASCL3Q9NQ33 180 aa12.12□□□□□ -0.47
TMEM47-201ENST00000275954 WIPF3A6NGB9 483 aa12.11□□□□□ -0.47
TMEM47-201ENST00000275954 C17orf98A8MV24 154 aa12.11□□□□□ -0.47
TMEM47-201ENST00000275954 J3QR06 171 aa12.11□□□□□ -0.47
TMEM47-201ENST00000275954 CD1BP29016 333 aa12.11□□□□□ -0.47
TMEM47-201ENST00000275954 MEOX2P50222 304 aa12.11□□□□□ -0.47
TMEM47-201ENST00000275954 RNF212Q495C1 297 aa12.11□□□□□ -0.47
TMEM47-201ENST00000275954 ZNF645Q8N7E2 425 aa12.11□□□□□ -0.47
TMEM47-201ENST00000275954 ZBTB34Q8NCN2 500 aa12.11□□□□□ -0.47
TMEM47-201ENST00000275954 CTDSP1Q9GZU7 261 aa12.11□□□□□ -0.47
TMEM47-201ENST00000275954 ZNF331Q9NQX6 463 aaPredicted RBP12.11□□□□□ -0.47
TMEM47-201ENST00000275954 AP4M1O00189 453 aa12.11□□□□□ -0.47
TMEM47-201ENST00000275954 PSG5Q15238 335 aa12.11□□□□□ -0.47
TMEM47-201ENST00000275954 TBR1Q16650 682 aa12.11□□□□□ -0.47
TMEM47-201ENST00000275954 VMA21Q3ZAQ7 101 aa12.11□□□□□ -0.47
TMEM47-201ENST00000275954 WISP2O76076 250 aa12.11□□□□□ -0.47
TMEM47-201ENST00000275954 IL18BPO95998 194 aa12.11□□□□□ -0.47
TMEM47-201ENST00000275954 KHDC3LQ587J8 217 aa12.11□□□□□ -0.47
TMEM47-201ENST00000275954 ZNF343Q6P1L6 599 aa12.11□□□□□ -0.47
TMEM47-201ENST00000275954 TRAV20A0A0B4J274 112 aa12.11□□□□□ -0.47
TMEM47-201ENST00000275954 NCBP2LA6PVI3 153 aaKnown RBP12.11□□□□□ -0.47
TMEM47-201ENST00000275954 RHOBP62745 196 aa12.11□□□□□ -0.47
TMEM47-201ENST00000275954 SLC25A10Q9UBX3 287 aaPredicted RBP12.11□□□□□ -0.47
TMEM47-201ENST00000275954 ZNF98A6NK75 572 aa12.1□□□□□ -0.47
TMEM47-201ENST00000275954 WDR25Q64LD2 544 aaPredicted RBP12.1□□□□□ -0.47
TMEM47-201ENST00000275954 ZNF439Q8NDP4 499 aa12.1□□□□□ -0.47
TMEM47-201ENST00000275954 TMEM56Q96MV1 263 aa12.1□□□□□ -0.47
TMEM47-201ENST00000275954 PRO1933Q9H354 126 aa12.1□□□□□ -0.47
TMEM47-201ENST00000275954 CALYQ9NYX4 217 aa12.1□□□□□ -0.47
TMEM47-201ENST00000275954 CTXND1A0A1B0GTU2 59 aa12.1□□□□□ -0.47
TMEM47-201ENST00000275954 SCGB2A1O75556 95 aa12.1□□□□□ -0.47
TMEM47-201ENST00000275954 RBP4P02753 201 aa12.1□□□□□ -0.47
TMEM47-201ENST00000275954 CD3EP07766 207 aa12.1□□□□□ -0.47
TMEM47-201ENST00000275954 HOXA4Q00056 320 aaPredicted RBP12.1□□□□□ -0.47
TMEM47-201ENST00000275954 MIC13Q5XKP0 118 aa12.1□□□□□ -0.47
TMEM47-201ENST00000275954 H1FOOQ8IZA3 346 aaPredicted RBP12.1□□□□□ -0.47
TMEM47-201ENST00000275954 OR10A7Q8NGE5 316 aa12.1□□□□□ -0.47
TMEM47-201ENST00000275954 RAB24Q969Q5 203 aa12.1□□□□□ -0.47
TMEM47-201ENST00000275954 MRPS18CQ9Y3D5 142 aaKnown RBP12.1□□□□□ -0.47
TMEM47-201ENST00000275954 THBS3P49746 956 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms