RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 OR6M1Q8NGM8 313 aa6.78□□□□□ -1.32
TPM3-201ENST00000271850 DDB2Q92466 427 aa6.78□□□□□ -1.32
TPM3-201ENST00000271850 TMEM203Q969S6 136 aa6.78□□□□□ -1.32
TPM3-201ENST00000271850 CABLES2Q9BTV7 478 aa6.78□□□□□ -1.32
TPM3-201ENST00000271850 TINAGL1Q9GZM7 467 aaPredicted RBP6.78□□□□□ -1.32
TPM3-201ENST00000271850 WFDC10AQ9H1F0 79 aa6.78□□□□□ -1.32
TPM3-201ENST00000271850 RANGRFQ9HD47 186 aaPredicted RBP6.78□□□□□ -1.32
TPM3-201ENST00000271850 HSF4Q9ULV5 492 aa6.78□□□□□ -1.32
TPM3-201ENST00000271850 ERGIC3Q9Y282 383 aa6.78□□□□□ -1.32
TPM3-201ENST00000271850 AK6Q9Y3D8 172 aaKnown RBP6.78□□□□□ -1.32
TPM3-201ENST00000271850 DMRT1Q9Y5R6 373 aa6.78□□□□□ -1.32
TPM3-201ENST00000271850 M0R1X1 148 aa6.77□□□□□ -1.33
TPM3-201ENST00000271850 BMPR1BO00238 502 aa6.77□□□□□ -1.33
TPM3-201ENST00000271850 PRH1P02810 166 aa6.77□□□□□ -1.33
TPM3-201ENST00000271850 GSTT2P0CG29 244 aa6.77□□□□□ -1.33
TPM3-201ENST00000271850 GSTT2BP0CG30 244 aa6.77□□□□□ -1.33
TPM3-201ENST00000271850 SPHARQ15513 63 aa6.77□□□□□ -1.33
TPM3-201ENST00000271850 C19orf35Q6ZS72 473 aa6.77□□□□□ -1.33
TPM3-201ENST00000271850 ANKRD13BQ86YJ7 626 aa6.77□□□□□ -1.33
TPM3-201ENST00000271850 C10orf67Q8IYJ2 551 aa6.77□□□□□ -1.33
TPM3-201ENST00000271850 MS4A15Q8N5U1 240 aa6.77□□□□□ -1.33
TPM3-201ENST00000271850 ADAD2Q8NCV1 583 aaKnown RBP6.77□□□□□ -1.33
TPM3-201ENST00000271850 MAFIPQ8WZ33 124 aa6.77□□□□□ -1.33
TPM3-201ENST00000271850 THRSPQ92748 146 aa6.77□□□□□ -1.33
TPM3-201ENST00000271850 ISOC1Q96CN7 298 aa6.77□□□□□ -1.33
TPM3-201ENST00000271850 TSNAXQ99598 290 aaKnown RBP6.77□□□□□ -1.33
TPM3-201ENST00000271850 FAM110AQ9BQ89 295 aa6.77□□□□□ -1.33
TPM3-201ENST00000271850 MND1Q9BWT6 205 aa6.77□□□□□ -1.33
TPM3-201ENST00000271850 RIMS4Q9H426 269 aaPredicted RBP6.77□□□□□ -1.33
TPM3-201ENST00000271850 PALMDQ9NP74 551 aa6.77□□□□□ -1.33
TPM3-201ENST00000271850 C12orf4Q9NQ89 552 aa6.77□□□□□ -1.33
TPM3-201ENST00000271850 SLC35D1Q9NTN3 355 aa6.77□□□□□ -1.33
TPM3-201ENST00000271850 TRBV6-7A0A0A0MS04 114 aa6.76□□□□□ -1.33
TPM3-201ENST00000271850 TMEM272A0A1B0GTI8 110 aa6.76□□□□□ -1.33
TPM3-201ENST00000271850 A0A1B0GW64 132 aa6.76□□□□□ -1.33
TPM3-201ENST00000271850 RBMY1BA6NDE4 496 aaKnown RBP6.76□□□□□ -1.33
TPM3-201ENST00000271850 RBMY1EA6NEQ0 496 aaKnown RBP6.76□□□□□ -1.33
TPM3-201ENST00000271850 LINC00473A8K010 186 aa6.76□□□□□ -1.33
TPM3-201ENST00000271850 ZNF785A8K8V0 405 aa6.76□□□□□ -1.33
TPM3-201ENST00000271850 TRDCB7Z8K6 153 aa6.76□□□□□ -1.33
TPM3-201ENST00000271850 FCGR3AP08637 254 aa6.76□□□□□ -1.33
TPM3-201ENST00000271850 RBMY1DP0C7P1 496 aaKnown RBP6.76□□□□□ -1.33
TPM3-201ENST00000271850 ZP3P21754 424 aa6.76□□□□□ -1.33
TPM3-201ENST00000271850 FABP5Q01469 135 aa6.76□□□□□ -1.33
TPM3-201ENST00000271850 TMEM177Q53S58 311 aa6.76□□□□□ -1.33
TPM3-201ENST00000271850 C10orf55Q5SWW7 151 aa6.76□□□□□ -1.33
TPM3-201ENST00000271850 IDO2Q6ZQW0 420 aa6.76□□□□□ -1.33
TPM3-201ENST00000271850 SGPP2Q8IWX5 399 aa6.76□□□□□ -1.33
TPM3-201ENST00000271850 BVESQ8NE79 360 aa6.76□□□□□ -1.33
TPM3-201ENST00000271850 HARBI1Q96MB7 349 aa6.76□□□□□ -1.33
TPM3-201ENST00000271850 CMSS1Q9BQ75 279 aaKnown RBP6.76□□□□□ -1.33
TPM3-201ENST00000271850 SPATA25Q9BR10 227 aa6.76□□□□□ -1.33
TPM3-201ENST00000271850 ELOVL1Q9BW60 279 aa6.76□□□□□ -1.33
TPM3-201ENST00000271850 OR2D2Q9H210 308 aa6.76□□□□□ -1.33
TPM3-201ENST00000271850 HIPK2Q9H2X6 1198 aa6.76□□□□□ -1.33
TPM3-201ENST00000271850 ZNF355PQ9NSJ1 428 aa6.76□□□□□ -1.33
TPM3-201ENST00000271850 SIGLEC8Q9NYZ4 499 aa6.76□□□□□ -1.33
TPM3-201ENST00000271850 PEF1Q9UBV8 284 aaKnown RBP6.76□□□□□ -1.33
TPM3-201ENST00000271850 ZNF230Q9UIE0 474 aaPredicted RBP6.76□□□□□ -1.33
TPM3-201ENST00000271850 ELF5Q9UKW6 265 aaPredicted RBP6.76□□□□□ -1.33
TPM3-201ENST00000271850 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.76□□□□□ -1.33
TPM3-201ENST00000271850 DNAH10Q8IVF4 4471 aa6.76□□□□□ -1.33
TPM3-201ENST00000271850 TRBV9A0A0B4J1U6 114 aa6.75□□□□□ -1.33
TPM3-201ENST00000271850 A0A0B4J203 849 aa6.75□□□□□ -1.33
TPM3-201ENST00000271850 C13orf42A0A1B0GVH6 325 aa6.75□□□□□ -1.33
TPM3-201ENST00000271850 MSGN1A6NI15 193 aa6.75□□□□□ -1.33
TPM3-201ENST00000271850 E7EUB6 86 aa6.75□□□□□ -1.33
TPM3-201ENST00000271850 PTGES3LE9PB15 166 aa6.75□□□□□ -1.33
TPM3-201ENST00000271850 MFNGO00587 321 aa6.75□□□□□ -1.33
TPM3-201ENST00000271850 FABP7O15540 132 aa6.75□□□□□ -1.33
TPM3-201ENST00000271850 IGLV2-14P01704 120 aa6.75□□□□□ -1.33
TPM3-201ENST00000271850 APOA2P02652 100 aa6.75□□□□□ -1.33
TPM3-201ENST00000271850 CD7P09564 240 aa6.75□□□□□ -1.33
TPM3-201ENST00000271850 DUTP33316 252 aaKnown RBP6.75□□□□□ -1.33
TPM3-201ENST00000271850 TPBGQ13641 420 aa6.75□□□□□ -1.33
TPM3-201ENST00000271850 MED22Q15528 200 aa6.75□□□□□ -1.33
TPM3-201ENST00000271850 RAB11BQ15907 218 aa6.75□□□□□ -1.33
TPM3-201ENST00000271850 PRSS8Q16651 343 aa6.75□□□□□ -1.33
TPM3-201ENST00000271850 C2orf76Q3KRA6 126 aa6.75□□□□□ -1.33
TPM3-201ENST00000271850 CD300EQ496F6 205 aaPredicted RBP6.75□□□□□ -1.33
TPM3-201ENST00000271850 NR2C2APQ86WQ0 139 aa6.75□□□□□ -1.33
TPM3-201ENST00000271850 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.75□□□□□ -1.33
TPM3-201ENST00000271850 OR4A4PQ8NGN8 299 aa6.75□□□□□ -1.33
TPM3-201ENST00000271850 NRG4Q8WWG1 115 aa6.75□□□□□ -1.33
TPM3-201ENST00000271850 FAM3DQ96BQ1 224 aa6.75□□□□□ -1.33
TPM3-201ENST00000271850 URM1Q9BTM9 101 aaKnown RBP6.75□□□□□ -1.33
TPM3-201ENST00000271850 PLEKHA3Q9HB20 300 aa6.75□□□□□ -1.33
TPM3-201ENST00000271850 AKIP1Q9NQ31 210 aa6.75□□□□□ -1.33
TPM3-201ENST00000271850 C8orf4Q9NR00 106 aa6.75□□□□□ -1.33
TPM3-201ENST00000271850 NKX1-2Q9UD57 310 aaPredicted RBP6.75□□□□□ -1.33
TPM3-201ENST00000271850 ZNF221Q9UK13 617 aa6.75□□□□□ -1.33
TPM3-201ENST00000271850 A0A0G2JLM5 398 aa6.74□□□□□ -1.33
TPM3-201ENST00000271850 RAB27BO00194 218 aa6.74□□□□□ -1.33
TPM3-201ENST00000271850 BET1O15155 118 aa6.74□□□□□ -1.33
TPM3-201ENST00000271850 CNIH1O95406 144 aa6.74□□□□□ -1.33
TPM3-201ENST00000271850 GNB3P16520 340 aa6.74□□□□□ -1.33
TPM3-201ENST00000271850 ADMP35318 185 aa6.74□□□□□ -1.33
TPM3-201ENST00000271850 MAP2K4P45985 399 aa6.74□□□□□ -1.33
TPM3-201ENST00000271850 LGALS7P47929 136 aa6.74□□□□□ -1.33
TPM3-201ENST00000271850 OR10A3P58181 314 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms