RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 CA2P00918 260 aa7.5□□□□□ -1.21
VPS41-201ENST00000265745 IGLV2-23P01705 113 aa7.5□□□□□ -1.21
VPS41-201ENST00000265745 APOA2P02652 100 aa7.5□□□□□ -1.21
VPS41-201ENST00000265745 CRYGBP07316 175 aa7.5□□□□□ -1.21
VPS41-201ENST00000265745 LGALS1P09382 135 aaKnown RBP7.5□□□□□ -1.21
VPS41-201ENST00000265745 GNB3P16520 340 aa7.5□□□□□ -1.21
VPS41-201ENST00000265745 GALP22466 123 aa7.5□□□□□ -1.21
VPS41-201ENST00000265745 LGALS7P47929 136 aa7.5□□□□□ -1.21
VPS41-201ENST00000265745 SLURP1P55000 103 aa7.5□□□□□ -1.21
VPS41-201ENST00000265745 SSBP2P81877 361 aaPredicted RBP7.5□□□□□ -1.21
VPS41-201ENST00000265745 MRPS15P82914 257 aaKnown RBP7.5□□□□□ -1.21
VPS41-201ENST00000265745 PJVKQ0ZLH3 352 aa7.5□□□□□ -1.21
VPS41-201ENST00000265745 FXYD3Q14802 87 aa7.5□□□□□ -1.21
VPS41-201ENST00000265745 OR10J5Q8NHC4 309 aa7.5□□□□□ -1.21
VPS41-201ENST00000265745 ARPC1AQ92747 370 aa7.5□□□□□ -1.21
VPS41-201ENST00000265745 MS4A10Q96PG2 267 aa7.5□□□□□ -1.21
VPS41-201ENST00000265745 CABLES2Q9BTV7 478 aa7.5□□□□□ -1.21
VPS41-201ENST00000265745 SLA2Q9H6Q3 261 aa7.5□□□□□ -1.21
VPS41-201ENST00000265745 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.5□□□□□ -1.21
VPS41-201ENST00000265745 SLC35D1Q9NTN3 355 aa7.5□□□□□ -1.21
VPS41-201ENST00000265745 NDUFB11Q9NX14 153 aa7.5□□□□□ -1.21
VPS41-201ENST00000265745 SDHAF2Q9NX18 166 aa7.5□□□□□ -1.21
VPS41-201ENST00000265745 ZNF230Q9UIE0 474 aaPredicted RBP7.5□□□□□ -1.21
VPS41-201ENST00000265745 BLOC1S6Q9UL45 172 aa7.5□□□□□ -1.21
VPS41-201ENST00000265745 X6R8D5 127 aa7.5□□□□□ -1.21
VPS41-201ENST00000265745 COL7A1Q02388 2944 aa7.5□□□□□ -1.21
VPS41-201ENST00000265745 A0A0B4J203 849 aa7.49□□□□□ -1.21
VPS41-201ENST00000265745 METTL21EPA6NDL7 271 aa7.49□□□□□ -1.21
VPS41-201ENST00000265745 ERICH4A6NGS2 130 aa7.49□□□□□ -1.21
VPS41-201ENST00000265745 BET1O15155 118 aa7.49□□□□□ -1.21
VPS41-201ENST00000265745 IGHV3-11P01762 117 aa7.49□□□□□ -1.21
VPS41-201ENST00000265745 HSPB1P04792 205 aaKnown RBP7.49□□□□□ -1.21
VPS41-201ENST00000265745 HIST1H1DP16402 221 aaKnown RBP7.49□□□□□ -1.21
VPS41-201ENST00000265745 GADD45AP24522 165 aa7.49□□□□□ -1.21
VPS41-201ENST00000265745 CD40LGP29965 261 aa7.49□□□□□ -1.21
VPS41-201ENST00000265745 TPPP2P59282 170 aa7.49□□□□□ -1.21
VPS41-201ENST00000265745 SRSF7Q16629 238 aaKnown RBP eCLIP7.49□□□□□ -1.21
VPS41-201ENST00000265745 ACSM6Q6P461 480 aa7.49□□□□□ -1.21
VPS41-201ENST00000265745 NR2C2APQ86WQ0 139 aa7.49□□□□□ -1.21
VPS41-201ENST00000265745 GRPEL2Q8TAA5 225 aa7.49□□□□□ -1.21
VPS41-201ENST00000265745 C5orf30Q96GV9 206 aa7.49□□□□□ -1.21
VPS41-201ENST00000265745 RAB26Q9ULW5 256 aa7.49□□□□□ -1.21
VPS41-201ENST00000265745 SMAD5-AS1Q9Y6J3 95 aa7.49□□□□□ -1.21
VPS41-201ENST00000265745 U3KQK5 164 aa7.49□□□□□ -1.21
VPS41-201ENST00000265745 KMT2CQ8NEZ4 4911 aaKnown RBP7.49□□□□□ -1.21
VPS41-201ENST00000265745 A0A075B6Q4 140 aa7.48□□□□□ -1.21
VPS41-201ENST00000265745 SRRM4A7MD48 611 aaKnown RBP7.48□□□□□ -1.21
VPS41-201ENST00000265745 MRPS14O60783 128 aaKnown RBP7.48□□□□□ -1.21
VPS41-201ENST00000265745 SAP30O75446 220 aa7.48□□□□□ -1.21
VPS41-201ENST00000265745 CNIH1O95406 144 aa7.48□□□□□ -1.21
VPS41-201ENST00000265745 LY86O95711 162 aa7.48□□□□□ -1.21
VPS41-201ENST00000265745 TRGV3P03979 118 aa7.48□□□□□ -1.21
VPS41-201ENST00000265745 RAB3BP20337 219 aa7.48□□□□□ -1.21
VPS41-201ENST00000265745 MYL9P24844 172 aa7.48□□□□□ -1.21
VPS41-201ENST00000265745 C22orf42Q6IC83 251 aa7.48□□□□□ -1.21
VPS41-201ENST00000265745 Q6ZS49 121 aa7.48□□□□□ -1.21
VPS41-201ENST00000265745 POC5Q8NA72 575 aa7.48□□□□□ -1.21
VPS41-201ENST00000265745 OR5T1Q8NG75 326 aa7.48□□□□□ -1.21
VPS41-201ENST00000265745 MAFIPQ8WZ33 124 aa7.48□□□□□ -1.21
VPS41-201ENST00000265745 ASCL2Q99929 193 aa7.48□□□□□ -1.21
VPS41-201ENST00000265745 CENPOQ9BU64 300 aa7.48□□□□□ -1.21
VPS41-201ENST00000265745 OR2D2Q9H210 308 aa7.48□□□□□ -1.21
VPS41-201ENST00000265745 ZMAT4Q9H898 229 aa7.48□□□□□ -1.21
VPS41-201ENST00000265745 IGKV1D-8A0A087WSZ0 117 aa7.47□□□□□ -1.21
VPS41-201ENST00000265745 H3BUA1 57 aa7.47□□□□□ -1.21
VPS41-201ENST00000265745 BRI3O95415 125 aa7.47□□□□□ -1.21
VPS41-201ENST00000265745 SPNP16150 400 aa7.47□□□□□ -1.21
VPS41-201ENST00000265745 FGF9P31371 208 aaPredicted RBP7.47□□□□□ -1.21
VPS41-201ENST00000265745 TALDO1P37837 337 aa7.47□□□□□ -1.21
VPS41-201ENST00000265745 ARFRP1Q13795 201 aa7.47□□□□□ -1.21
VPS41-201ENST00000265745 MRGPRG-AS1Q2M3A8 158 aa7.47□□□□□ -1.21
VPS41-201ENST00000265745 CDNFQ49AH0 187 aa7.47□□□□□ -1.21
VPS41-201ENST00000265745 UBE2UQ5VVX9 321 aa7.47□□□□□ -1.21
VPS41-201ENST00000265745 H1FOOQ8IZA3 346 aaPredicted RBP7.47□□□□□ -1.21
VPS41-201ENST00000265745 SPARTQ8N0X7 666 aa7.47□□□□□ -1.21
VPS41-201ENST00000265745 DDB2Q92466 427 aa7.47□□□□□ -1.21
VPS41-201ENST00000265745 HARBI1Q96MB7 349 aa7.47□□□□□ -1.21
VPS41-201ENST00000265745 TMEM68Q96MH6 324 aa7.47□□□□□ -1.21
VPS41-201ENST00000265745 OR4C12Q96R67 309 aa7.47□□□□□ -1.21
VPS41-201ENST00000265745 GINS4Q9BRT9 223 aa7.47□□□□□ -1.21
VPS41-201ENST00000265745 ATG5Q9H1Y0 275 aa7.47□□□□□ -1.21
VPS41-201ENST00000265745 RANGRFQ9HD47 186 aaPredicted RBP7.47□□□□□ -1.21
VPS41-201ENST00000265745 ZNF355PQ9NSJ1 428 aa7.47□□□□□ -1.21
VPS41-201ENST00000265745 ELF5Q9UKW6 265 aaPredicted RBP7.47□□□□□ -1.21
VPS41-201ENST00000265745 STAB2Q8WWQ8 2551 aa7.47□□□□□ -1.21
VPS41-201ENST00000265745 A0A0G2JLM5 398 aa7.46□□□□□ -1.22
VPS41-201ENST00000265745 NOTOA8MTQ0 251 aa7.46□□□□□ -1.22
VPS41-201ENST00000265745 RRASP10301 218 aa7.46□□□□□ -1.22
VPS41-201ENST00000265745 GP9P14770 177 aa7.46□□□□□ -1.22
VPS41-201ENST00000265745 DTYMKP23919 212 aa7.46□□□□□ -1.22
VPS41-201ENST00000265745 DUTP33316 252 aaKnown RBP7.46□□□□□ -1.22
VPS41-201ENST00000265745 GABARAPL2P60520 117 aa7.46□□□□□ -1.22
VPS41-201ENST00000265745 ARL6IP1Q15041 203 aa7.46□□□□□ -1.22
VPS41-201ENST00000265745 PRSS8Q16651 343 aa7.46□□□□□ -1.22
VPS41-201ENST00000265745 RTL8BQ17RB0 113 aa7.46□□□□□ -1.22
VPS41-201ENST00000265745 HACD4Q5VWC8 232 aa7.46□□□□□ -1.22
VPS41-201ENST00000265745 SBSPONQ8IVN8 264 aa7.46□□□□□ -1.22
VPS41-201ENST00000265745 TEX45Q8NA69 505 aa7.46□□□□□ -1.22
VPS41-201ENST00000265745 OR6Q1Q8NGQ2 317 aa7.46□□□□□ -1.22
VPS41-201ENST00000265745 ADTRPQ96IZ2 230 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms