RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 C10orf91Q5T1B1 145 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 HOGA1Q86XE5 327 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 ST6GALNAC6Q969X2 333 aa4.97□□□□□ -1.61
VCAN-201ENST00000265077 VENTXO95231 258 aa4.96□□□□□ -1.61
VCAN-201ENST00000265077 FCGR3AP08637 254 aa4.96□□□□□ -1.61
VCAN-201ENST00000265077 POC1AQ8NBT0 407 aa4.96□□□□□ -1.61
VCAN-201ENST00000265077 SPXQ9BT56 116 aa4.96□□□□□ -1.61
VCAN-201ENST00000265077 SYNGR2O43760 224 aa4.96□□□□□ -1.61
VCAN-201ENST00000265077 CXCL1P09341 107 aa4.96□□□□□ -1.61
VCAN-201ENST00000265077 AZU1P20160 251 aa4.96□□□□□ -1.61
VCAN-201ENST00000265077 CBLN1P23435 193 aa4.96□□□□□ -1.61
VCAN-201ENST00000265077 TSPOP30536 169 aa4.96□□□□□ -1.61
VCAN-201ENST00000265077 PTPRBP23467 1997 aa4.96□□□□□ -1.61
VCAN-201ENST00000265077 TRGV5A0A0B4J1U4 118 aa4.96□□□□□ -1.61
VCAN-201ENST00000265077 TSPAN13O95857 204 aa4.96□□□□□ -1.61
VCAN-201ENST00000265077 TUBD1Q9UJT1 453 aa4.96□□□□□ -1.61
VCAN-201ENST00000265077 LOC107984156A0A0G2JMH3 177 aa4.96□□□□□ -1.62
VCAN-201ENST00000265077 KBTBD11-OT1A0A1B0GTJ5 212 aa4.96□□□□□ -1.62
VCAN-201ENST00000265077 OR2T8A6NH00 312 aa4.96□□□□□ -1.62
VCAN-201ENST00000265077 SRP19P09132 144 aaKnown RBP4.96□□□□□ -1.62
VCAN-201ENST00000265077 SRIP30626 198 aa4.96□□□□□ -1.62
VCAN-201ENST00000265077 MFAP4P55083 255 aa4.96□□□□□ -1.62
VCAN-201ENST00000265077 PTCRAQ6ISU1 281 aaPredicted RBP4.96□□□□□ -1.62
VCAN-201ENST00000265077 ARL17AQ8IVW1 177 aa4.96□□□□□ -1.62
VCAN-201ENST00000265077 PLSCR2Q9NRY7 297 aa4.96□□□□□ -1.62
VCAN-201ENST00000265077 AURKAIP1Q9NWT8 199 aaPredicted RBP4.96□□□□□ -1.62
VCAN-201ENST00000265077 MPDU1O75352 247 aa4.96□□□□□ -1.62
VCAN-201ENST00000265077 PPYP01298 95 aa4.96□□□□□ -1.62
VCAN-201ENST00000265077 UBE2L3P68036 154 aaKnown RBP4.96□□□□□ -1.62
VCAN-201ENST00000265077 DUSP2Q05923 314 aa4.96□□□□□ -1.62
VCAN-201ENST00000265077 CD226Q15762 336 aa4.96□□□□□ -1.62
VCAN-201ENST00000265077 FAM89BQ8N5H3 189 aa4.96□□□□□ -1.62
VCAN-201ENST00000265077 OR1B1Q8NGR6 318 aa4.96□□□□□ -1.62
VCAN-201ENST00000265077 OR1L1Q8NH94 360 aa4.96□□□□□ -1.62
VCAN-201ENST00000265077 HSD17B10Q99714 261 aaKnown RBP4.96□□□□□ -1.62
VCAN-201ENST00000265077 CHRNA10Q9GZZ6 450 aa4.96□□□□□ -1.62
VCAN-201ENST00000265077 SLC7A10Q9NS82 523 aa4.96□□□□□ -1.62
VCAN-201ENST00000265077 TMEM242Q9NWH2 141 aa4.96□□□□□ -1.62
VCAN-201ENST00000265077 YBX2Q9Y2T7 364 aaKnown RBP4.96□□□□□ -1.62
VCAN-201ENST00000265077 LOC105371242A0A075B767 164 aa4.96□□□□□ -1.62
VCAN-201ENST00000265077 PPIAL4CA0A0B4J2A2 164 aa4.96□□□□□ -1.62
VCAN-201ENST00000265077 NGFP01138 241 aa4.96□□□□□ -1.62
VCAN-201ENST00000265077 PPIAL4GP0DN37 164 aa4.96□□□□□ -1.62
VCAN-201ENST00000265077 EWSR1Q01844 656 aaKnown RBP eCLIP4.96□□□□□ -1.62
VCAN-201ENST00000265077 FBXW9Q5XUX1 488 aa4.96□□□□□ -1.62
VCAN-201ENST00000265077 LRRC61Q9BV99 259 aa4.96□□□□□ -1.62
VCAN-201ENST00000265077 SS18L2Q9UHA2 77 aa4.96□□□□□ -1.62
VCAN-201ENST00000265077 IGHV3-15A0A0B4J1V0 119 aa4.96□□□□□ -1.62
VCAN-201ENST00000265077 A0A1B0GW64 132 aa4.96□□□□□ -1.62
VCAN-201ENST00000265077 RNF222A6NCQ9 220 aa4.96□□□□□ -1.62
VCAN-201ENST00000265077 NKX2-6A6NCS4 301 aa4.96□□□□□ -1.62
VCAN-201ENST00000265077 C2orf68Q2NKX9 166 aa4.96□□□□□ -1.62
VCAN-201ENST00000265077 ZNF32P17041 273 aa4.96□□□□□ -1.62
VCAN-201ENST00000265077 KLHDC3Q9BQ90 382 aa4.96□□□□□ -1.62
VCAN-201ENST00000265077 SLC25A5P05141 298 aaKnown RBP4.96□□□□□ -1.62
VCAN-201ENST00000265077 OR4D11Q8NGI4 311 aa4.96□□□□□ -1.62
VCAN-201ENST00000265077 WDYHV1Q96HA8 205 aa4.96□□□□□ -1.62
VCAN-201ENST00000265077 ODAMA1E959 279 aa4.96□□□□□ -1.62
VCAN-201ENST00000265077 OR4C46A6NHA9 309 aa4.96□□□□□ -1.62
VCAN-201ENST00000265077 SERF1AO75920 110 aa4.96□□□□□ -1.62
VCAN-201ENST00000265077 LINC00869P0C866 280 aa4.96□□□□□ -1.62
VCAN-201ENST00000265077 CAMPP49913 170 aa4.96□□□□□ -1.62
VCAN-201ENST00000265077 ANKRD55Q3KP44 614 aa4.96□□□□□ -1.62
VCAN-201ENST00000265077 PLXNA4Q9HCM2 1894 aa4.96□□□□□ -1.62
VCAN-201ENST00000265077 H0Y980 276 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 PPBPP02775 128 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 IL6RP08887 468 aaPredicted RBP4.95□□□□□ -1.62
VCAN-201ENST00000265077 ST6GALNAC2Q9UJ37 374 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 PPIAL4EA0A075B759 164 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 CXCL13O43927 109 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 PPIAL4FP0DN26 164 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 POLR3KQ9Y2Y1 108 aaPredicted RBP4.95□□□□□ -1.62
VCAN-201ENST00000265077 PPIAL4AQ9Y536 164 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 SPTBN4Q9H254 2564 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 CHST1O43916 411 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 MST1P26927 711 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 TMEM240Q5SV17 173 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 LINC01555Q8NAE3 123 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 USP9XQ93008 2570 aaPredicted RBP4.95□□□□□ -1.62
VCAN-201ENST00000265077 ACP1P24666 158 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 OPRK1P41145 380 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 HIST1H1AQ02539 215 aaPredicted RBP4.95□□□□□ -1.62
VCAN-201ENST00000265077 M0R1B8 84 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 SOCS1O15524 211 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 CISD3P0C7P0 127 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 PSG11Q9UQ72 335 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 USP9YO00507 2555 aaPredicted RBP4.95□□□□□ -1.62
VCAN-201ENST00000265077 A0A1B0GTI1 187 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 LIPT2A6NK58 231 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 ZNF785A8K8V0 405 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 METTL12A8MUP2 240 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 SRD5A2P31213 254 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 RAC3P60763 192 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 CD300EQ496F6 205 aaPredicted RBP4.95□□□□□ -1.62
VCAN-201ENST00000265077 CYP2G1PQ6ZSU1 146 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 SPEM1Q8N4L4 309 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 OR2Z1Q8NG97 314 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 AQP3Q92482 292 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 GPR27Q9NS67 375 aa4.95□□□□□ -1.62
VCAN-201ENST00000265077 MRPS18CQ9Y3D5 142 aaKnown RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms