RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 ATG5Q9H1Y0 275 aa9.41□□□□□ -0.9
TRAF4-202ENST00000262396 SDHAF2Q9NX18 166 aa9.41□□□□□ -0.9
TRAF4-202ENST00000262396 PEMTQ9UBM1 199 aa9.41□□□□□ -0.9
TRAF4-202ENST00000262396 IGKV1-6A0A0C4DH72 117 aa9.4□□□□□ -0.9
TRAF4-202ENST00000262396 DPPA5A6NC42 116 aa9.4□□□□□ -0.9
TRAF4-202ENST00000262396 MSGN1A6NI15 193 aa9.4□□□□□ -0.9
TRAF4-202ENST00000262396 CRYZL1O95825 349 aa9.4□□□□□ -0.9
TRAF4-202ENST00000262396 MAP2K4P45985 399 aa9.4□□□□□ -0.9
TRAF4-202ENST00000262396 FABP5Q01469 135 aa9.4□□□□□ -0.9
TRAF4-202ENST00000262396 DEFA5Q01523 94 aa9.4□□□□□ -0.9
TRAF4-202ENST00000262396 PJVKQ0ZLH3 352 aa9.4□□□□□ -0.9
TRAF4-202ENST00000262396 IRF3Q14653 427 aa9.4□□□□□ -0.9
TRAF4-202ENST00000262396 ARL6IP1Q15041 203 aa9.4□□□□□ -0.9
TRAF4-202ENST00000262396 PRSS48Q7RTY5 328 aa9.4□□□□□ -0.9
TRAF4-202ENST00000262396 DYNLRB2Q8TF09 96 aa9.4□□□□□ -0.9
TRAF4-202ENST00000262396 GFI1Q99684 422 aa9.4□□□□□ -0.9
TRAF4-202ENST00000262396 TINAGL1Q9GZM7 467 aaPredicted RBP9.4□□□□□ -0.9
TRAF4-202ENST00000262396 ZNF230Q9UIE0 474 aaPredicted RBP9.4□□□□□ -0.9
TRAF4-202ENST00000262396 MRPS7Q9Y2R9 242 aaKnown RBP9.4□□□□□ -0.9
TRAF4-202ENST00000262396 PRELID3BQ9Y3B1 194 aa9.4□□□□□ -0.9
TRAF4-202ENST00000262396 SORL1Q92673 2214 aa9.4□□□□□ -0.91
TRAF4-202ENST00000262396 IGLV1-51P01701 117 aa9.39□□□□□ -0.91
TRAF4-202ENST00000262396 RAB3BP20337 219 aa9.39□□□□□ -0.91
TRAF4-202ENST00000262396 ATP5G2Q06055 141 aa9.39□□□□□ -0.91
TRAF4-202ENST00000262396 ZNF367Q7RTV3 350 aa9.39□□□□□ -0.91
TRAF4-202ENST00000262396 CNBD2Q96M20 576 aa9.39□□□□□ -0.91
TRAF4-202ENST00000262396 SPATA25Q9BR10 227 aa9.39□□□□□ -0.91
TRAF4-202ENST00000262396 ST6GALNAC5Q9BVH7 336 aa9.39□□□□□ -0.91
TRAF4-202ENST00000262396 DUSP21Q9H596 190 aa9.39□□□□□ -0.91
TRAF4-202ENST00000262396 TRBV6-7A0A0A0MS04 114 aa9.38□□□□□ -0.91
TRAF4-202ENST00000262396 FOXI3A8MTJ6 420 aaPredicted RBP9.38□□□□□ -0.91
TRAF4-202ENST00000262396 PROP1O75360 226 aa9.38□□□□□ -0.91
TRAF4-202ENST00000262396 OR9G9P0C7N8 305 aa9.38□□□□□ -0.91
TRAF4-202ENST00000262396 CD37P11049 281 aa9.38□□□□□ -0.91
TRAF4-202ENST00000262396 SNRPBP14678 240 aaKnown RBP9.38□□□□□ -0.91
TRAF4-202ENST00000262396 HIST1H1DP16402 221 aaKnown RBP9.38□□□□□ -0.91
TRAF4-202ENST00000262396 CD36P16671 472 aa9.38□□□□□ -0.91
TRAF4-202ENST00000262396 RAB6AP20340 208 aa9.38□□□□□ -0.91
TRAF4-202ENST00000262396 HSPA13P48723 471 aa9.38□□□□□ -0.91
TRAF4-202ENST00000262396 OR10A3P58181 314 aa9.38□□□□□ -0.91
TRAF4-202ENST00000262396 UBE2KP61086 200 aa9.38□□□□□ -0.91
TRAF4-202ENST00000262396 KLF5Q13887 457 aaPredicted RBP9.38□□□□□ -0.91
TRAF4-202ENST00000262396 TMEM177Q53S58 311 aa9.38□□□□□ -0.91
TRAF4-202ENST00000262396 IDO2Q6ZQW0 420 aa9.38□□□□□ -0.91
TRAF4-202ENST00000262396 SLC25A42Q86VD7 318 aa9.38□□□□□ -0.91
TRAF4-202ENST00000262396 Q8N402 240 aa9.38□□□□□ -0.91
TRAF4-202ENST00000262396 TEX45Q8NA69 505 aa9.38□□□□□ -0.91
TRAF4-202ENST00000262396 SRSF12Q8WXF0 261 aaKnown RBP9.38□□□□□ -0.91
TRAF4-202ENST00000262396 CITED4Q96RK1 184 aa9.38□□□□□ -0.91
TRAF4-202ENST00000262396 SPIN2AQ99865 258 aa9.38□□□□□ -0.91
TRAF4-202ENST00000262396 SPIN2BQ9BPZ2 258 aa9.38□□□□□ -0.91
TRAF4-202ENST00000262396 CABLES2Q9BTV7 478 aa9.38□□□□□ -0.91
TRAF4-202ENST00000262396 NKX1-2Q9UD57 310 aaPredicted RBP9.38□□□□□ -0.91
TRAF4-202ENST00000262396 IFITM5A6NNB3 132 aa9.37□□□□□ -0.91
TRAF4-202ENST00000262396 FCGR3BO75015 233 aa9.37□□□□□ -0.91
TRAF4-202ENST00000262396 DIRAS3O95661 229 aa9.37□□□□□ -0.91
TRAF4-202ENST00000262396 IGLV2-23P01705 113 aa9.37□□□□□ -0.91
TRAF4-202ENST00000262396 CTXN2P0C2S0 81 aa9.37□□□□□ -0.91
TRAF4-202ENST00000262396 CRHBPP24387 322 aa9.37□□□□□ -0.91
TRAF4-202ENST00000262396 RHOGP84095 191 aa9.37□□□□□ -0.91
TRAF4-202ENST00000262396 EXOSC2Q13868 293 aaKnown RBP9.37□□□□□ -0.91
TRAF4-202ENST00000262396 PRSS8Q16651 343 aa9.37□□□□□ -0.91
TRAF4-202ENST00000262396 OR2B11Q5JQS5 317 aa9.37□□□□□ -0.91
TRAF4-202ENST00000262396 ZNF343Q6P1L6 599 aa9.37□□□□□ -0.91
TRAF4-202ENST00000262396 KCTD9Q7L273 389 aa9.37□□□□□ -0.91
TRAF4-202ENST00000262396 OSR1Q8TAX0 266 aaPredicted RBP9.37□□□□□ -0.91
TRAF4-202ENST00000262396 SLC2A8Q9NY64 477 aa9.37□□□□□ -0.91
TRAF4-202ENST00000262396 TRAV1-2A0A0B4J238 106 aa9.36□□□□□ -0.91
TRAF4-202ENST00000262396 FAM223BA6NKX1 122 aa9.36□□□□□ -0.91
TRAF4-202ENST00000262396 AIREO43918 545 aa9.36□□□□□ -0.91
TRAF4-202ENST00000262396 SLC22A5O76082 557 aa9.36□□□□□ -0.91
TRAF4-202ENST00000262396 TPPPO94811 219 aa9.36□□□□□ -0.91
TRAF4-202ENST00000262396 OR2A4O95047 310 aa9.36□□□□□ -0.91
TRAF4-202ENST00000262396 DUTP33316 252 aaKnown RBP9.36□□□□□ -0.91
TRAF4-202ENST00000262396 GNG2P59768 71 aa9.36□□□□□ -0.91
TRAF4-202ENST00000262396 PLA2G7Q13093 441 aa9.36□□□□□ -0.91
TRAF4-202ENST00000262396 TBCEQ15813 527 aaPredicted RBP9.36□□□□□ -0.91
TRAF4-202ENST00000262396 GUCA2BQ16661 112 aa9.36□□□□□ -0.91
TRAF4-202ENST00000262396 CDNFQ49AH0 187 aa9.36□□□□□ -0.91
TRAF4-202ENST00000262396 C22orf42Q6IC83 251 aa9.36□□□□□ -0.91
TRAF4-202ENST00000262396 FAM223AQ8IWN6 122 aa9.36□□□□□ -0.91
TRAF4-202ENST00000262396 MMD2Q8IY49 270 aa9.36□□□□□ -0.91
TRAF4-202ENST00000262396 TCTEX1D2Q8WW35 142 aa9.36□□□□□ -0.91
TRAF4-202ENST00000262396 SMIM30A4D0T7 59 aa9.35□□□□□ -0.91
TRAF4-202ENST00000262396 SRRM4A7MD48 611 aaKnown RBP9.35□□□□□ -0.91
TRAF4-202ENST00000262396 MFNGO00587 321 aa9.35□□□□□ -0.91
TRAF4-202ENST00000262396 SCGNO76038 276 aa9.35□□□□□ -0.91
TRAF4-202ENST00000262396 DHFRP00374 187 aa9.35□□□□□ -0.91
TRAF4-202ENST00000262396 TRBV12-3P01733 135 aa9.35□□□□□ -0.91
TRAF4-202ENST00000262396 PRH1P02810 166 aa9.35□□□□□ -0.91
TRAF4-202ENST00000262396 CRYGBP07316 175 aa9.35□□□□□ -0.91
TRAF4-202ENST00000262396 DTYMKP23919 212 aa9.35□□□□□ -0.91
TRAF4-202ENST00000262396 ARPC4P59998 168 aa9.35□□□□□ -0.91
TRAF4-202ENST00000262396 CD81P60033 236 aa9.35□□□□□ -0.91
TRAF4-202ENST00000262396 DYRK1AQ13627 763 aa9.35□□□□□ -0.91
TRAF4-202ENST00000262396 CDK10Q15131 360 aa9.35□□□□□ -0.91
TRAF4-202ENST00000262396 FAM209BQ5JX69 171 aa9.35□□□□□ -0.91
TRAF4-202ENST00000262396 IZUMO2Q6UXV1 221 aa9.35□□□□□ -0.91
TRAF4-202ENST00000262396 H1FOOQ8IZA3 346 aaPredicted RBP9.35□□□□□ -0.91
TRAF4-202ENST00000262396 Q8N1Y9 231 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms